| Microexon ID | Pt_5:22042900-22042906:+ |
| Species | Populus Trichocarpa | Coordinates | 5:22042900..22042906 |
| Microexon Cluster ID | MEP15 |
| Size | 7 |
| Phase | 2 |
| Pfam Domain Motif | GBP |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,7,51 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | AGTGAAG |
| Microexon Amino Acid seq | RVK |
| Microexon-tag DNA Seq | ATATCTCGTCTGTCATTTGCTGTCGAGCTTGCTGAAGAATTTTATGGAAGAGTGAAGGGCCAAGATGTTGCATTTGAACCTGCAAAACTTTTGTGGCTTATCCAGCGT |
| Microexon-tag Amino Acid Seq | ISRLSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQR |
| Microexon-tag spanning region | 22042697-22043056 |
| Microexon-tag prediction score | 0.9717 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.005G217300.3.v4.1x |
| Reference Transcript ID | Potri.005G217300.3.v4.1 |
| Gene ID | Potri.005G217300.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.005G217300.3.v4.1 |
| Protein ID | |
| Gene ID | Potri.005G217300.v4.1 |
| Gene Name | |
| Pfam domain motif | GBP |
| Motif E-value | 7.20E-36 |
| Motif start | 42 |
| Motif end | 287 |
| Protein seq | >Potri.005G217300.3.v4.1 MKISRWILFYWLFLCVFASGSLSIDNFNRAFPIIEPDPNHTKLHLASEGLEAIKRITNPIAAVAVIGPYRSGKSFLLNQL LSLSCYEGFGVGHMRDTKTKGIWVWGTPVELDINGVKTSVFYLDTEGFESIGKSNVYDDRIFALATVLSSVLIYNLPETI READISRLSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQEMVNEALQHVPNNDGDRNIDQVNQIRDSLAI MGDNSTAFSLPQPHLLRTKLCDMKDGELDLVYVKKRDQLKELVASIIRPKIVQGRTLNGKEFVAFLEQILEALNKGEIPS TGSLVEVFNKGILERCLKLYSEMMAKLPLPLSEKSLQNVHENSKGEAMKSFDEQHFGRHHAKRSVMQLDEEIEKVYKNFV MANEYQSAKLCEALYSRCEDRMDQLQVLRLPSMAKFNAGFLQCNQNFEQECVGPSKANYELRMMKMMGKSKSSFINEYNH RLFNWLVVFSLVMVVVGRFIIKFILIEIGAWILFIFLETYTRMFWSVESLYYNPVWHFIVATWETLVYSPFLDLDRWAIP LGLVAAILVVYWRCYGRRKHGSQRLLPLYNNPKGGTHRPRTD* |
| CDS seq | >Potri.005G217300.3.v4.1 ATGAAGATTTCTCGTTGGATTTTGTTTTACTGGCTTTTTCTTTGCGTTTTCGCATCCGGGTCTCTCTCAATTGACAATTT TAACCGAGCGTTTCCTATCATTGAACCTGATCCTAATCACACGAAACTTCATCTTGCAAGTGAAGGATTGGAAGCTATCA AACGAATAACGAACCCTATTGCTGCTGTTGCTGTAATCGGTCCATATCGCTCTGGAAAATCTTTTCTGCTCAATCAGCTT CTTTCACTTTCTTGTTATGAAGGTTTTGGTGTTGGACATATGCGTGACACAAAGACCAAAGGGATTTGGGTTTGGGGAAC CCCGGTTGAATTGGATATCAACGGAGTAAAAACTTCTGTGTTTTACCTTGATACAGAGGGATTTGAAAGTATTGGGAAGT CAAATGTCTATGATGATCGGATTTTTGCTCTGGCAACTGTTCTGAGCTCTGTGCTTATATATAATCTGCCTGAGACGATC CGAGAAGCTGACATATCTCGTCTGTCATTTGCTGTCGAGCTTGCTGAAGAATTTTATGGAAGAGTGAAGGGCCAAGATGT TGCATTTGAACCTGCAAAACTTTTGTGGCTTATCCAGCGTGATTTTCTACAAGGGAAGTCAGTGCAAGAAATGGTGAATG AAGCCCTCCAACACGTTCCTAACAATGATGGGGACAGAAATATTGACCAGGTTAATCAGATCCGAGACTCGTTGGCTATC ATGGGTGATAACAGCACTGCCTTCAGCTTGCCACAACCTCATCTCCTGCGAACAAAGCTTTGTGACATGAAGGATGGTGA GCTTGATCTTGTGTATGTTAAGAAGAGAGATCAGTTAAAAGAACTTGTTGCTAGCATTATTCGTCCAAAGATTGTGCAGG GTAGAACTCTAAATGGAAAGGAGTTTGTAGCTTTCTTGGAGCAGATACTCGAAGCCTTGAATAAAGGGGAGATCCCATCA ACAGGCTCTTTGGTGGAGGTTTTCAATAAGGGTATTCTTGAGCGATGTTTGAAGCTATACAGTGAAATGATGGCAAAGTT ACCCTTACCACTTTCTGAGAAATCTCTGCAAAATGTCCATGAAAACTCTAAAGGGGAAGCAATGAAATCTTTTGATGAAC AACATTTTGGCCGTCATCATGCAAAGAGATCTGTCATGCAGCTGGATGAAGAAATAGAGAAGGTTTATAAGAATTTCGTA ATGGCAAATGAATATCAATCAGCAAAGCTCTGTGAGGCACTTTATTCTAGATGTGAGGACAGAATGGACCAGCTTCAGGT TCTCAGACTTCCTTCCATGGCAAAATTCAATGCAGGCTTCCTGCAATGCAACCAAAATTTTGAGCAGGAGTGTGTTGGAC CTTCAAAGGCAAATTACGAGCTTCGCATGATGAAGATGATGGGGAAATCAAAATCTTCATTTATAAATGAATACAACCAC AGGCTCTTCAATTGGTTGGTGGTGTTCTCCCTTGTCATGGTGGTAGTGGGCCGCTTTATTATAAAGTTTATTTTGATAGA AATTGGTGCGTGGATACTTTTTATCTTCCTAGAGACCTACACGAGGATGTTTTGGTCTGTGGAGTCTCTCTATTACAACC CAGTTTGGCATTTTATTGTCGCAACCTGGGAAACACTTGTTTACAGCCCTTTTCTTGATTTGGACAGATGGGCAATTCCA CTTGGTTTGGTGGCAGCAATTTTGGTGGTATATTGGCGGTGTTATGGTAGAAGGAAACATGGGTCACAGAGGCTGTTACC CTTGTACAATAATCCTAAAGGGGGTACTCATAGGCCGAGAACAGACTAA |
Pt_5:22042900-22042906:+ does not have available information here.