
Microexon ID | Ps_NC_039359.1:187631488-187631494:+ |
Species | Papaver somniferum | Coordinates | NC_039359.1:187631488..187631494 |
Microexon Cluster ID | MEP15 |
Size | 7 |
Phase | 2 |
Pfam Domain Motif | GBP |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,7,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGTGAAG |
Microexon Amino Acid seq | RVK |
Microexon-tag DNA Seq | ATATCGCGGCTGTCATTTGCTGTTGAGCTTGCAGAAGAATTTTATGGAAGAGTGAAGGGGCAGGATATCGCATTTGAGCCTGCAAAACTTTTGTGGCTCATCCAACGC |
Microexon-tag Amino Acid Seq | ISRLSFAVELAEEFYGRVKGQDIAFEPAKLLWLIQR |
Microexon-tag spanning region | 187631330-187631652 |
Microexon-tag prediction score | 0.9734 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026594077.1x |
Reference Transcript ID | XM_026594077.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026594077.1 |
Protein ID | XP_026449862.1 |
Gene ID | LOC113350018 |
Gene Name | NA |
Pfam domain motif | GBP |
Motif E-value | 4.5e-40 |
Motif start | 42 |
Motif end | 287 |
Protein seq | >XP_026449862.1 MESWRWPFALSIYFCLFTSGFSLIDNFQQAFPIVEPDPGHTKLRISREGLEAIERITNPIAAVAVIGPYRSGKSFLLNQL LSLSCDEGFGVGHMRDTKTKGIWVWGTPIELTIDGIKTSVLYLDTEGFESVGKSNVYDDRIFALATVISSVLIYNLPETI READISRLSFAVELAEEFYGRVKGQDIAFEPAKLLWLIQRDFLQGKSVQQMVNEALQRVPNANSDKHIDQVNQIRESLAI MGDNSTAFSLPQPHLQRTQLCELKDGELDPSYIRKREQLKELVASIIRPKIVQSKRLNGKEFVAFLEQILDALNKGEIPS TGSLVEVFNKGILERCLKLYSEKMGQLRLPISEGSLQEIHEESRTEAMKSFDEQHFGHYHAKQSVEKLDTEILIAYKNYI LANEYKSSKLCEGLYTRCEDKMDQLQVLRLPSMAKFNAGFLLCNQSFEVECAGPSKVNYEQRMAKMLGKSRSLFIKEYNH RLFNWLVAFSLVMVIVGRFVVKFFLMEIAAWVLFIFLETYTRMFWSAESLYYNPAWHFIVATWETIVYSPVLDLDRWAIP VCLILAIFILYWRCCGKRKHGVRGLLPLYNTRGSNRERTD* |
CDS seq | >XM_026594077.1 ATGGAGTCTTGGAGATGGCCTTTTGCTCTGTCGATCTACTTTTGCTTATTCACATCTGGGTTTTCATTAATAGATAATTT CCAGCAAGCGTTTCCGATTGTGGAGCCTGATCCCGGCCATACTAAACTTCGCATTTCAAGAGAAGGCTTGGAGGCAATAG AAAGAATAACAAACCCAATTGCAGCTGTCGCTGTAATTGGTCCATACCGTTCAGGCAAATCTTTTCTGCTGAATCAACTT CTTTCCCTTTCATGTGATGAAGGTTTTGGTGTTGGTCATATGCGCGATACCAAAACGAAAGGAATATGGGTATGGGGAAC CCCTATAGAATTAACAATTGATGGAATAAAAACATCCGTGCTTTATCTTGATACAGAAGGGTTTGAAAGTGTTGGAAAGT CTAACGTATACGATGACAGGATTTTTGCGTTAGCAACTGTTATAAGTTCTGTGCTTATATACAATCTCCCTGAGACGATC CGTGAAGCAGATATATCGCGGCTGTCATTTGCTGTTGAGCTTGCAGAAGAATTTTATGGAAGAGTGAAGGGGCAGGATAT CGCATTTGAGCCTGCAAAACTTTTGTGGCTCATCCAACGCGATTTTTTACAAGGAAAATCTGTGCAACAGATGGTGAATG AAGCTCTTCAACGGGTTCCTAATGCCAATAGTGATAAACATATTGATCAGGTTAACCAAATTCGAGAGTCTCTAGCAATT ATGGGTGATAATAGTACTGCATTTAGCTTGCCACAGCCTCATCTCCAGCGGACGCAACTTTGTGAGTTGAAGGATGGTGA ACTGGACCCTAGCTATATTAGGAAAAGGGAGCAGCTGAAAGAACTTGTTGCTTCCATTATTCGTCCTAAAATCGTGCAGA GTAAACGCCTAAACGGGAAGGAGTTTGTAGCTTTCTTAGAGCAGATTCTTGATGCTTTGAACAAAGGGGAGATCCCTTCT ACAGGCTCTCTTGTGGAGGTTTTCAATAAAGGAATTCTAGAGCGGTGCTTGAAGTTGTATAGCGAAAAGATGGGTCAGTT GCGATTACCCATATCAGAGGGATCTCTGCAAGAAATTCATGAGGAGTCAAGAACAGAAGCAATGAAATCCTTTGATGAGC AGCATTTCGGACATTACCATGCAAAGCAATCTGTTGAGAAGCTGGATACTGAGATACTCATAGCATACAAGAATTACATT CTGGCAAATGAATACAAGTCTTCAAAGCTGTGTGAGGGACTGTACACGCGGTGTGAAGACAAAATGGACCAGCTTCAGGT TCTGAGGCTTCCTTCCATGGCTAAATTTAACGCAGGTTTCCTTCTGTGCAATCAAAGCTTCGAGGTCGAGTGTGCGGGGC CCTCTAAAGTTAACTACGAACAGCGGATGGCAAAGATGCTCGGGAAGTCCCGGTCTTTATTCATAAAAGAATACAACCAC AGGCTCTTCAATTGGTTGGTGGCGTTTTCTCTCGTCATGGTAATTGTTGGTAGATTCGTTGTAAAGTTCTTTTTAATGGA GATAGCAGCATGGGTACTATTTATATTCTTGGAGACGTACACGAGGATGTTCTGGTCAGCTGAGTCTCTTTATTACAATC CTGCATGGCATTTCATTGTTGCAACTTGGGAGACTATTGTTTATAGTCCCGTCCTTGATCTAGACAGATGGGCAATACCA GTTTGTTTGATTCTTGCGATTTTTATTCTATATTGGCGGTGTTGTGGGAAAAGGAAACACGGGGTACGTGGTCTGTTACC TTTATACAACACTCGCGGCTCAAACAGAGAGAGAACTGACTGA |
Microexon DNA seq | AGTGAAG |
Microexon Amino Acid seq | RVK |
Microexon-tag DNA Seq | ATATCGCGGCTGTCATTTGCTGTTGAGCTTGCAGAAGAATTTTATGGAAGAGTGAAGGGGCAGGATATCGCATTTGAGCCTGCAAAACTTTTGTGGCTCATCCAACGC |
Microexon-tag Amino Acid seq | ISRLSFAVELAEEFYGRVKGQDIAFEPAKLLWLIQR |
Transcript ID | XM_026594077.1 |
Gene ID | Ps.14143 |
Gene Name | NA |
Pfam domain motif | GBP |
Motif E-value | 4.5e-40 |
Motif start | 42 |
Motif end | 287 |
Protein seq | >XM_026594077.1 MESWRWPFALSIYFCLFTSGFSLIDNFQQAFPIVEPDPGHTKLRISREGLEAIERITNPIAAVAVIGPYRSGKSFLLNQL LSLSCDEGFGVGHMRDTKTKGIWVWGTPIELTIDGIKTSVLYLDTEGFESVGKSNVYDDRIFALATVISSVLIYNLPETI READISRLSFAVELAEEFYGRVKGQDIAFEPAKLLWLIQRDFLQGKSVQQMVNEALQRVPNANSDKHIDQVNQIRESLAI MGDNSTAFSLPQPHLQRTQLCELKDGELDPSYIRKREQLKELVASIIRPKIVQSKRLNGKEFVAFLEQILDALNKGEIPS TGSLVEVFNKGILERCLKLYSEKMGQLRLPISEGSLQEIHEESRTEAMKSFDEQHFGHYHAKQSVEKLDTEILIAYKNYI LANEYKSSKLCEGLYTRCEDKMDQLQVLRLPSMAKFNAGFLLCNQSFEVECAGPSKVNYEQRMAKMLGKSRSLFIKEYNH RLFNWLVAFSLVMVIVGRFVVKFFLMEIAAWVLFIFLETYTRMFWSAESLYYNPAWHFIVATWETIVYSPVLDLDRWAIP VCLILAIFILYWRCCGKRKHGVRGLLPLYNTRGSNRERTD* |
CDS seq | >XM_026594077.1 ATGGAGTCTTGGAGATGGCCTTTTGCTCTGTCGATCTACTTTTGCTTATTCACATCTGGGTTTTCATTAATAGATAATTT CCAGCAAGCGTTTCCGATTGTGGAGCCTGATCCCGGCCATACTAAACTTCGCATTTCAAGAGAAGGCTTGGAGGCAATAG AAAGAATAACAAACCCAATTGCAGCTGTCGCTGTAATTGGTCCATACCGTTCAGGCAAATCTTTTCTGCTGAATCAACTT CTTTCCCTTTCATGTGATGAAGGTTTTGGTGTTGGTCATATGCGCGATACCAAAACGAAAGGAATATGGGTATGGGGAAC CCCTATAGAATTAACAATTGATGGAATAAAAACATCCGTGCTTTATCTTGATACAGAAGGGTTTGAAAGTGTTGGAAAGT CTAACGTATACGATGACAGGATTTTTGCGTTAGCAACTGTTATAAGTTCTGTGCTTATATACAATCTCCCTGAGACGATC CGTGAAGCAGATATATCGCGGCTGTCATTTGCTGTTGAGCTTGCAGAAGAATTTTATGGAAGAGTGAAGGGGCAGGATAT CGCATTTGAGCCTGCAAAACTTTTGTGGCTCATCCAACGCGATTTTTTACAAGGAAAATCTGTGCAACAGATGGTGAATG AAGCTCTTCAACGGGTTCCTAATGCCAATAGTGATAAACATATTGATCAGGTTAACCAAATTCGAGAGTCTCTAGCAATT ATGGGTGATAATAGTACTGCATTTAGCTTGCCACAGCCTCATCTCCAGCGGACGCAACTTTGTGAGTTGAAGGATGGTGA ACTGGACCCTAGCTATATTAGGAAAAGGGAGCAGCTGAAAGAACTTGTTGCTTCCATTATTCGTCCTAAAATCGTGCAGA GTAAACGCCTAAACGGGAAGGAGTTTGTAGCTTTCTTAGAGCAGATTCTTGATGCTTTGAACAAAGGGGAGATCCCTTCT ACAGGCTCTCTTGTGGAGGTTTTCAATAAAGGAATTCTAGAGCGGTGCTTGAAGTTGTATAGCGAAAAGATGGGTCAGTT GCGATTACCCATATCAGAGGGATCTCTGCAAGAAATTCATGAGGAGTCAAGAACAGAAGCAATGAAATCCTTTGATGAGC AGCATTTCGGACATTACCATGCAAAGCAATCTGTTGAGAAGCTGGATACTGAGATACTCATAGCATACAAGAATTACATT CTGGCAAATGAATACAAGTCTTCAAAGCTGTGTGAGGGACTGTACACGCGGTGTGAAGACAAAATGGACCAGCTTCAGGT TCTGAGGCTTCCTTCCATGGCTAAATTTAACGCAGGTTTCCTTCTGTGCAATCAAAGCTTCGAGGTCGAGTGTGCGGGGC CCTCTAAAGTTAACTACGAACAGCGGATGGCAAAGATGCTCGGGAAGTCCCGGTCTTTATTCATAAAAGAATACAACCAC AGGCTCTTCAATTGGTTGGTGGCGTTTTCTCTCGTCATGGTAATTGTTGGTAGATTCGTTGTAAAGTTCTTTTTAATGGA GATAGCAGCATGGGTACTATTTATATTCTTGGAGACGTACACGAGGATGTTCTGGTCAGCTGAGTCTCTTTATTACAATC CTGCATGGCATTTCATTGTTGCAACTTGGGAGACTATTGTTTATAGTCCCGTCCTTGATCTAGACAGATGGGCAATACCA GTTTGTTTGATTCTTGCGATTTTTATTCTATATTGGCGGTGTTGTGGGAAAAGGAAACACGGGGTACGTGGTCTGTTACC TTTATACAACACTCGCGGCTCAAACAGAGAGAGAACTGACTGA |