
Microexon ID | Pp_22:11378446-11378452:+ |
Species | Physcomitrium patens | Coordinates | 22:11378446..11378452 |
Microexon Cluster ID | MEP15 |
Size | 7 |
Phase | 2 |
Pfam Domain Motif | GBP |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,7,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGTTAAG |
Microexon Amino Acid seq | RVK |
Microexon-tag DNA Seq | ATCGCCAAGCTGTCGTTTGCAGTAGACTTGGCAGAAGAGTTTTATGGTCGGGTTAAGGGAAGAGAAAGTATTTTGGAACCTGCTAAGCTGCTCTGGTTGATCCAACGC |
Microexon-tag Amino Acid Seq | IAKLSFAVDLAEEFYGRVKGRESILEPAKLLWLIQR |
Microexon-tag spanning region | 11378188-11378696 |
Microexon-tag prediction score | 0.8615 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Pp3c22_17680V3.1x |
Reference Transcript ID | Pp3c22_17680V3.1 |
Gene ID | Pp3c22_17680 |
Gene Name | NA |
Transcript ID | Pp3c22_17680V3.1 |
Protein ID | Pp3c22_17680V3.1 |
Gene ID | Pp3c22_17680 |
Gene Name | NA |
Pfam domain motif | GBP |
Motif E-value | 9.8e-37 |
Motif start | 59 |
Motif end | 300 |
Protein seq | >Pp3c22_17680V3.1 MDGRQSKTCSRVAFLSFVLCYFIGVVGYGDMSGSHLRGSTSSQFHKAFSIVEPDPGHTKLAVSRSGLNAIARITNPIAVV AVIGPYRSGKSFLLNQLLSLSCNEGFGVGHMRDTKTRGIWAWGEPLEINLDGVKTSVLFLDTEGFESIGKSNVYDDRIFA LAAIMSSVLIYNLPETVREADIAKLSFAVDLAEEFYGRVKGRESILEPAKLLWLIQRDFLEGKSVQAMVEEALQTVPNPD NNKDIFQVNRIRKSLSLMAENSTAFSLPQPHLERTKLCEMGDSELHHSYVSQRERLKKVVTSMIRPKIVQGGTITGKDFV SLLEQTLDALNKGEIPSAGYVVEAFNRAVVDRCVALYNTRMSKFQLPVREEELLSGHESTVHEVTSLFGKERFGRQKDND ESSRMLLMQVEKAYVTLVEINTFRSSRQCDNIYTSCEDQLDSLQGLRLPSMAKFSAGITSCNITFTKNCLGPSKPVYQKR LEKMWLKARSHFINNYNQRLFNWLVVLSLVMVVVGRFVIKFLLLEIAAWGLFIFLETYTRIFWSAESLYYNPTWRVVVSA WEATVYGPLLDLDRWFIPLSWIIFFGFITYRLKFGRRKKGPAPLLPSVDIPRTSRRSRFLKM* |
CDS seq | >Pp3c22_17680V3.1 ATGGATGGGAGGCAAAGTAAAACGTGCTCAAGGGTGGCCTTTCTTTCCTTCGTACTCTGCTATTTCATCGGAGTGGTTGG ATATGGAGATATGTCCGGAAGTCATTTACGCGGTTCTACTTCCTCACAATTCCACAAAGCGTTTTCAATCGTGGAGCCGG ATCCAGGGCACACAAAATTAGCGGTATCTAGAAGCGGTTTGAATGCTATAGCGCGAATCACGAATCCAATTGCGGTTGTT GCGGTCATCGGACCTTATCGTTCTGGAAAATCATTTCTCCTCAATCAGCTTCTGTCACTTTCCTGCAATGAAGGGTTTGG CGTTGGCCACATGCGGGACACGAAGACGAGAGGTATTTGGGCGTGGGGGGAGCCTCTGGAAATCAACCTCGACGGTGTGA AGACCTCGGTCTTATTCTTGGACACGGAAGGCTTTGAGAGTATTGGAAAGTCCAATGTTTATGATGATAGGATATTTGCA CTAGCAGCTATAATGAGTTCCGTTCTTATTTATAATTTGCCGGAGACGGTACGTGAGGCTGATATCGCCAAGCTGTCGTT TGCAGTAGACTTGGCAGAAGAGTTTTATGGTCGGGTTAAGGGAAGAGAAAGTATTTTGGAACCTGCTAAGCTGCTCTGGT TGATCCAACGCGACTTCCTTGAGGGAAAGTCAGTTCAGGCGATGGTGGAAGAAGCGCTGCAGACCGTTCCCAATCCTGAC AACAACAAGGACATATTCCAGGTGAATCGCATACGGAAATCCTTGTCGTTAATGGCAGAGAATAGCACAGCTTTTAGCTT ACCTCAGCCACACTTGGAGCGTACAAAGCTTTGTGAAATGGGAGACTCAGAACTTCATCATTCATACGTGAGCCAGAGGG AGCGCTTAAAAAAGGTTGTGACTTCTATGATTCGGCCAAAAATAGTCCAAGGGGGGACAATCACTGGAAAAGATTTCGTC TCTCTTCTAGAACAGACGCTGGATGCTCTAAACAAAGGGGAGATTCCGTCAGCTGGCTATGTGGTGGAAGCTTTCAACAG AGCTGTAGTTGATCGATGTGTAGCGTTGTACAATACTCGTATGTCCAAATTCCAGTTGCCTGTTCGTGAAGAAGAGCTCC TCAGTGGTCATGAGAGTACCGTTCACGAGGTCACTAGCTTGTTTGGAAAGGAGCGATTTGGGAGGCAAAAAGATAACGAC GAATCGTCAAGAATGCTTCTCATGCAAGTGGAGAAGGCTTATGTAACTCTCGTGGAAATTAATACTTTTAGATCGTCAAG ACAGTGTGACAATATCTACACATCTTGTGAAGATCAACTAGATAGTCTACAGGGGCTGCGGTTACCTTCGATGGCGAAAT TCAGTGCTGGAATAACATCATGCAACATCACATTCACCAAAAACTGCCTGGGACCTTCAAAGCCTGTGTATCAAAAGCGT TTGGAGAAGATGTGGTTGAAGGCAAGGAGCCATTTCATAAACAACTACAACCAGCGTCTTTTCAACTGGCTTGTAGTTCT GTCTTTAGTCATGGTGGTTGTAGGTCGCTTTGTTATCAAATTCTTGCTCCTGGAGATTGCAGCTTGGGGGCTCTTCATTT TCTTAGAAACCTACACACGCATATTTTGGTCTGCCGAGTCCCTTTACTACAACCCCACTTGGCGAGTAGTGGTCTCGGCG TGGGAAGCAACTGTTTACGGCCCATTGCTTGATTTGGACAGGTGGTTTATCCCTCTGTCTTGGATTATATTTTTTGGATT CATAACATACCGATTGAAATTCGGGAGGCGTAAGAAAGGGCCAGCACCCCTGCTGCCAAGTGTCGACATTCCCAGAACCT CGAGAAGAAGTCGATTTCTGAAAATGTAG |
Microexon DNA seq | GGTTAAG |
Microexon Amino Acid seq | RVK |
Microexon-tag DNA Seq | ATCGCCAAGCTGTCGTTTGCAGTAGACTTGGCAGAAGAGTTTTATGGTCGGGTTAAGGGAAGAGAAAGTATTTTGGAACCTGCTAAGCTGCTCTGGTTGATCCAACGC |
Microexon-tag Amino Acid seq | IAKLSFAVDLAEEFYGRVKGRESILEPAKLLWLIQR |
Transcript ID | Pp3c22_17680V3.1 |
Gene ID | Pp.14569 |
Gene Name | NA |
Pfam domain motif | GBP |
Motif E-value | 9.8e-37 |
Motif start | 59 |
Motif end | 300 |
Protein seq | >Pp3c22_17680V3.1 MDGRQSKTCSRVAFLSFVLCYFIGVVGYGDMSGSHLRGSTSSQFHKAFSIVEPDPGHTKLAVSRSGLNAIARITNPIAVV AVIGPYRSGKSFLLNQLLSLSCNEGFGVGHMRDTKTRGIWAWGEPLEINLDGVKTSVLFLDTEGFESIGKSNVYDDRIFA LAAIMSSVLIYNLPETVREADIAKLSFAVDLAEEFYGRVKGRESILEPAKLLWLIQRDFLEGKSVQAMVEEALQTVPNPD NNKDIFQVNRIRKSLSLMAENSTAFSLPQPHLERTKLCEMGDSELHHSYVSQRERLKKVVTSMIRPKIVQGGTITGKDFV SLLEQTLDALNKGEIPSAGYVVEAFNRAVVDRCVALYNTRMSKFQLPVREEELLSGHESTVHEVTSLFGKERFGRQKDND ESSRMLLMQVEKAYVTLVEINTFRSSRQCDNIYTSCEDQLDSLQGLRLPSMAKFSAGITSCNITFTKNCLGPSKPVYQKR LEKMWLKARSHFINNYNQRLFNWLVVLSLVMVVVGRFVIKFLLLEIAAWGLFIFLETYTRIFWSAESLYYNPTWRVVVSA WEATVYGPLLDLDRWFIPLSWIIFFGFITYRLKFGRRKKGPAPLLPSVDIPRTSRRSRFLKM* |
CDS seq | >Pp3c22_17680V3.1 ATGGATGGGAGGCAAAGTAAAACGTGCTCAAGGGTGGCCTTTCTTTCCTTCGTACTCTGCTATTTCATCGGAGTGGTTGG ATATGGAGATATGTCCGGAAGTCATTTACGCGGTTCTACTTCCTCACAATTCCACAAAGCGTTTTCAATCGTGGAGCCGG ATCCAGGGCACACAAAATTAGCGGTATCTAGAAGCGGTTTGAATGCTATAGCGCGAATCACGAATCCAATTGCGGTTGTT GCGGTCATCGGACCTTATCGTTCTGGAAAATCATTTCTCCTCAATCAGCTTCTGTCACTTTCCTGCAATGAAGGGTTTGG CGTTGGCCACATGCGGGACACGAAGACGAGAGGTATTTGGGCGTGGGGGGAGCCTCTGGAAATCAACCTCGACGGTGTGA AGACCTCGGTCTTATTCTTGGACACGGAAGGCTTTGAGAGTATTGGAAAGTCCAATGTTTATGATGATAGGATATTTGCA CTAGCAGCTATAATGAGTTCCGTTCTTATTTATAATTTGCCGGAGACGGTACGTGAGGCTGATATCGCCAAGCTGTCGTT TGCAGTAGACTTGGCAGAAGAGTTTTATGGTCGGGTTAAGGGAAGAGAAAGTATTTTGGAACCTGCTAAGCTGCTCTGGT TGATCCAACGCGACTTCCTTGAGGGAAAGTCAGTTCAGGCGATGGTGGAAGAAGCGCTGCAGACCGTTCCCAATCCTGAC AACAACAAGGACATATTCCAGGTGAATCGCATACGGAAATCCTTGTCGTTAATGGCAGAGAATAGCACAGCTTTTAGCTT ACCTCAGCCACACTTGGAGCGTACAAAGCTTTGTGAAATGGGAGACTCAGAACTTCATCATTCATACGTGAGCCAGAGGG AGCGCTTAAAAAAGGTTGTGACTTCTATGATTCGGCCAAAAATAGTCCAAGGGGGGACAATCACTGGAAAAGATTTCGTC TCTCTTCTAGAACAGACGCTGGATGCTCTAAACAAAGGGGAGATTCCGTCAGCTGGCTATGTGGTGGAAGCTTTCAACAG AGCTGTAGTTGATCGATGTGTAGCGTTGTACAATACTCGTATGTCCAAATTCCAGTTGCCTGTTCGTGAAGAAGAGCTCC TCAGTGGTCATGAGAGTACCGTTCACGAGGTCACTAGCTTGTTTGGAAAGGAGCGATTTGGGAGGCAAAAAGATAACGAC GAATCGTCAAGAATGCTTCTCATGCAAGTGGAGAAGGCTTATGTAACTCTCGTGGAAATTAATACTTTTAGATCGTCAAG ACAGTGTGACAATATCTACACATCTTGTGAAGATCAACTAGATAGTCTACAGGGGCTGCGGTTACCTTCGATGGCGAAAT TCAGTGCTGGAATAACATCATGCAACATCACATTCACCAAAAACTGCCTGGGACCTTCAAAGCCTGTGTATCAAAAGCGT TTGGAGAAGATGTGGTTGAAGGCAAGGAGCCATTTCATAAACAACTACAACCAGCGTCTTTTCAACTGGCTTGTAGTTCT GTCTTTAGTCATGGTGGTTGTAGGTCGCTTTGTTATCAAATTCTTGCTCCTGGAGATTGCAGCTTGGGGGCTCTTCATTT TCTTAGAAACCTACACACGCATATTTTGGTCTGCCGAGTCCCTTTACTACAACCCCACTTGGCGAGTAGTGGTCTCGGCG TGGGAAGCAACTGTTTACGGCCCATTGCTTGATTTGGACAGGTGGTTTATCCCTCTGTCTTGGATTATATTTTTTGGATT CATAACATACCGATTGAAATTCGGGAGGCGTAAGAAAGGGCCAGCACCCCTGCTGCCAAGTGTCGACATTCCCAGAACCT CGAGAAGAAGTCGATTTCTGAAAATGTAG |