Microexon ID Os_3:33183404-33183410:+
Species Oryza sativa
Coordinates 3:33183404..33183410
Microexon Cluster ID MEP15
Size 7
Phase 2
Pfam Domain Motif GBP
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 50,7,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AGTGAAG
Microexon Amino Acid seq RVK
Microexon-tag DNA Seq ATATCTAGGCTCTCATTTGCTGTTGAGATTGCAGAAGAATTCTATGGAAGAGTGAAGGGGCAAGATGTTGCTTTTGAACCAGCAAAGCTTCTTTGGCTTATCCAGAGG
Microexon-tag Amino Acid Seq ISRLSFAVEIAEEFYGRVKGQDVAFEPAKLLWLIQR
Microexon-tag spanning region33183260-33183551
Microexon-tag prediction score0.9844
Overlapped with the annotated transcript (%) NA
New Transcript ID NA
Reference Transcript ID NA
Gene ID NA
Gene Name NA
Os_3:33183404-33183410:+ does not have available information here.
Microexon DNA seq AGTGAAG
Microexon Amino Acid seq RVK
Microexon-tag DNA Seq ATATCTAGGCTCTCATTTGCTGTTGAGATTGCAGAAGAATTCTATGGAAGAGTGAAGGGGCAAGATGTTGCTTTTGAACCAGCAAAGCTTCTTTGGCTTATCCAGAGG
Microexon-tag Amino Acid seq ISRLSFAVEIAEEFYGRVKGQDVAFEPAKLLWLIQR
Transcript ID Os.20757.1
Gene ID Os.20757
Gene Name NA
Pfam domain motif GBP
Motif E-value 2e-22
Motif start 4
Motif end 189
Protein seq >Os.20757.1
MRDTKTKGIWIWGTPVEMDIDGSKVSVLYLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPETVREADISRLSFAVE
IAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQQMVNEALQRVPNESGDKYIDEVNQIRDSLAVMGNNSTAFSLPQP
HLQRTKLCDMDDRELDPLYVKRRDELKQVVASITRPKIVQGKTLNGKEFVSFLQQILEALNKGEIPSTGSLVEIFNKAIL
DRCLKVYRDKMDGLRLPVPVDRLQQVHETAIDQARMLFDKQHFGKHHAAQSILKLDDEIKKVYRNFLLANEYQSSKLCEA
RFSECEDKMDHLQVLKLPSMAKFNAGFFHCNRSFVRECVGPAKESYERRMSKMLVKSRALFIKEYNNKLFNWLVTFSLVM
VVIGRFVIKFFLLEIVAWVMFIFLETYTRMFWSAESLYYNPAWHIIVSSWETIVYSPILDLDRWAIPIAVLLSFWLLYWR
CFGRRKRGSRSSLLPLHNKISHKNSTRPRSD*
CDS seq >Os.20757.1
ATGCGAGATACTAAAACTAAAGGTATATGGATTTGGGGTACACCTGTTGAAATGGACATTGATGGTTCAAAAGTGTCTGT
CCTTTACCTTGATACTGAAGGATTTGAGAGTGTTGGGAAGTCAAATGTATATGATGATAGGATATTTGCTTTGGCAACTG
TCTTGAGTTCAGTGCTAATCTACAACCTTCCTGAGACGGTGCGTGAAGCTGATATATCTAGGCTCTCATTTGCTGTTGAG
ATTGCAGAAGAATTCTATGGAAGAGTGAAGGGGCAAGATGTTGCTTTTGAACCAGCAAAGCTTCTTTGGCTTATCCAGAG
GGATTTCCTGCAAGGAAAATCTGTTCAGCAAATGGTCAATGAAGCCCTCCAACGGGTACCTAACGAAAGTGGGGACAAAT
ATATTGATGAGGTTAATCAAATTAGAGATTCTTTGGCAGTTATGGGCAACAACAGCACTGCTTTTAGCCTGCCCCAGCCG
CATCTACAAAGAACAAAGTTATGTGACATGGATGACAGAGAGCTTGACCCCTTATATGTAAAAAGGCGGGATGAATTGAA
GCAGGTCGTTGCGTCCATCACAAGACCAAAAATTGTGCAGGGGAAAACTCTAAATGGAAAGGAATTTGTTTCTTTCTTGC
AGCAGATTCTCGAGGCATTAAATAAAGGAGAGATTCCATCAACGGGATCTCTTGTTGAAATTTTCAATAAGGCCATTCTT
GATCGCTGTCTGAAGGTGTATAGGGATAAAATGGATGGCTTACGTCTACCAGTACCAGTAGACCGACTGCAACAAGTTCA
TGAGACAGCAATTGATCAAGCTAGAATGCTGTTTGATAAGCAGCACTTTGGTAAACACCATGCTGCTCAGTCAATCCTTA
AGCTTGATGATGAGATAAAAAAGGTGTACAGAAACTTCCTTCTAGCAAATGAGTATCAATCATCAAAGCTGTGTGAAGCA
CGCTTCTCAGAATGTGAAGATAAAATGGACCACCTTCAAGTCTTGAAGCTCCCTTCCATGGCAAAGTTCAATGCAGGGTT
TTTTCACTGCAATCGAAGTTTTGTAAGGGAATGTGTGGGCCCTGCAAAGGAAAGCTACGAGCGCAGAATGTCAAAGATGC
TTGTCAAGTCTCGTGCTCTTTTTATCAAGGAGTACAATAACAAGCTCTTCAATTGGTTGGTAACCTTCTCCCTAGTCATG
GTGGTTATTGGGCGCTTTGTCATCAAGTTCTTTTTACTTGAGATTGTTGCCTGGGTGATGTTCATCTTCCTGGAGACGTA
CACGAGGATGTTCTGGTCAGCAGAGTCATTGTACTATAATCCAGCTTGGCACATCATTGTCTCTTCGTGGGAAACTATCG
TATATAGCCCCATTCTCGATCTGGACAGATGGGCGATCCCCATTGCCGTATTATTGTCTTTTTGGCTTCTTTACTGGCGA
TGTTTCGGTAGAAGAAAACGGGGCAGCCGATCGTCACTCCTGCCACTCCACAACAAGATCTCCCACAAGAACTCAACGCG
CCCGAGATCAGACTAA