| Microexon ID | Bn_scaffoldC04:67772860-67772866:+ |
| Species | Brassica Napus | Coordinates | scaffoldC04:67772860..67772866 |
| Microexon Cluster ID | MEP15 |
| Size | 7 |
| Phase | 2 |
| Pfam Domain Motif | GBP |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,7,51 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | AGTAAAG |
| Microexon Amino Acid seq | RVK |
| Microexon-tag DNA Seq | ATTTCTAGGCTCTCCTTTGCTGTTGAGTTAGCAGAAGAATTTTACGGAAGAGTAAAGGGACAAGACGTTGCTTTTGAACCGTCAAAGCTCCTGTGGCTTATCCAGCGT |
| Microexon-tag Amino Acid Seq | ISRLSFAVELAEEFYGRVKGQDVAFEPSKLLWLIQR |
| Microexon-tag spanning region | 67772695-67772993 |
| Microexon-tag prediction score | 0.9638 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC04T0564100ZSx |
| Reference Transcript ID | BnaC04T0564100ZS |
| Gene ID | BnaC04G0564100ZS |
| Gene Name | NA |
| Transcript ID | BnaC04T0564100ZS |
| Protein ID | |
| Gene ID | BnaC04G0564100ZS |
| Gene Name | |
| Pfam domain motif | GBP |
| Motif E-value | 9.20E-38 |
| Motif start | 39 |
| Motif end | 285 |
| Protein seq | >BnaC04T0564100ZS MDRAFVFLLSLCLLLQTSLSIENFHQAFPIVEPDPNHTKLRLSREGLEAISRITTPIAAVAVIGPYRSGKSFLLNQLLSL SCYEGFGVGHMRDTKTKGIWVWGTPLELEIDGVKTSIIYLDTEGFESVGKSNVYDDRIFALATVMSSVLIYNLPETIREA DISRLSFAVELAEEFYGRVKGQDVAFEPSKLLWLIQRDFLQGKSVKEMVDEALKHVPNEDGNKNIDQVNRIRDSLAIMGD NSTAFSLPQPHLMRTKLCDLKDEELDPTYVARRDQLKKLVASILRPKIVQGKALNGKEFISFLEQILDALNKGEIPSTGS LVEIFNKDIVERCVKLYNERMVKLRLPMSEEYLQSAHETAHNEAIKAFDAQHFGRQHAKKSVDQLDEQMQEVYKNFVLAN EYQSSKLCEALYTKCEDDMDHLQALRLPSMAKFNAGFVYCNQSFEHQCVGPSKQSYEQRLTKMMGKARSLFIKEYNNRLF NWLVAFSLVTVVVGRFIIKFILLEMAAWILFIFLETYTRMFWTAESLFYNPVWHFIVGTWETVVYSPVLDLDRWAIPIVC IIALCVLYWRCYGKRKHGSSWLLPMYNKNGRSRERSE* |
| CDS seq | >BnaC04T0564100ZS ATGGATCGGGCGTTTGTTTTCTTACTGTCTCTCTGCCTCTTGTTGCAAACGTCTCTCTCGATTGAGAATTTTCACCAGGC TTTTCCTATAGTGGAGCCTGATCCGAATCATACAAAGCTTCGGCTTAGTAGAGAAGGTTTGGAAGCAATTAGCAGAATCA CTACTCCTATTGCTGCTGTTGCGGTGATTGGCCCATACCGTTCTGGAAAATCTTTTCTACTCAATCAGCTTCTTTCCCTT TCTTGTTATGAAGGTTTTGGTGTTGGACACATGCGTGATACAAAAACAAAAGGTATCTGGGTGTGGGGAACACCACTAGA GCTAGAGATTGACGGAGTTAAAACTTCAATTATTTACCTTGACACTGAAGGATTTGAAAGTGTTGGAAAGTCAAATGTTT ATGACGATCGAATATTTGCTCTGGCAACAGTTATGAGTTCTGTGCTTATCTATAATCTGCCTGAAACCATCCGCGAAGCT GATATTTCTAGGCTCTCCTTTGCTGTTGAGTTAGCAGAAGAATTTTACGGAAGAGTAAAGGGACAAGACGTTGCTTTTGA ACCGTCAAAGCTCCTGTGGCTTATCCAGCGTGATTTTCTGCAAGGTAAGTCGGTGAAGGAAATGGTGGATGAAGCTCTCA AACACGTCCCTAATGAAGATGGTAACAAAAACATTGATCAGGTTAACCGGATCCGGGATTCCTTGGCGATTATGGGTGAC AACAGCACTGCCTTCAGCTTACCACAGCCTCACCTCATGCGGACGAAGCTGTGTGATCTGAAGGATGAGGAACTGGACCC TACCTATGTGGCAAGGCGTGACCAATTGAAAAAGCTCGTTGCTAGTATCCTCCGCCCAAAGATAGTGCAGGGGAAAGCAT TAAATGGAAAGGAGTTTATTTCTTTCCTGGAACAGATACTGGATGCGCTAAATAAAGGAGAGATTCCATCAACAGGGTCA CTAGTTGAGATATTCAATAAAGATATCGTTGAGAGATGTGTGAAGCTGTACAATGAGAGGATGGTGAAACTGCGGCTACC TATGTCCGAAGAGTATCTCCAAAGTGCACATGAAACAGCACATAACGAAGCTATCAAAGCGTTTGACGCTCAGCATTTCG GAAGACAGCATGCGAAGAAATCTGTGGATCAGTTGGATGAACAGATGCAAGAGGTATATAAGAATTTTGTTCTTGCAAAT GAATACCAATCGTCAAAGCTCTGCGAGGCGCTGTACACAAAGTGTGAAGACGACATGGACCACTTGCAAGCTCTCCGGCT CCCTTCCATGGCGAAATTCAACGCAGGTTTCGTGTACTGCAACCAGAGTTTTGAACACCAATGTGTCGGTCCTTCGAAAC AAAGCTATGAGCAGAGGTTAACCAAGATGATGGGGAAGGCACGGTCATTGTTCATCAAAGAATACAATAACAGGCTGTTC AACTGGCTGGTTGCGTTCTCTCTGGTAACGGTAGTGGTGGGACGGTTCATTATAAAGTTCATTTTGTTGGAAATGGCGGC ATGGATACTCTTCATATTCTTGGAGACGTACACAAGGATGTTCTGGACAGCGGAATCTCTTTTCTACAACCCGGTCTGGC ATTTCATCGTTGGGACTTGGGAGACTGTTGTGTATAGTCCCGTTCTCGACTTGGACAGATGGGCGATTCCTATAGTCTGC ATTATTGCATTGTGTGTGCTTTATTGGCGGTGTTATGGAAAGAGGAAACACGGGTCTAGTTGGCTTCTTCCGATGTACAA CAAGAATGGTCGGAGCAGGGAACGGTCAGAGTAA |
Bn_scaffoldC04:67772860-67772866:+ does not have available information here.