| Microexon ID | Bn_scaffoldC03:13160983-13160989:+ |
| Species | Brassica Napus | Coordinates | scaffoldC03:13160983..13160989 |
| Microexon Cluster ID | MEP15 |
| Size | 7 |
| Phase | 2 |
| Pfam Domain Motif | GBP |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,7,51 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | AGTAAAG |
| Microexon Amino Acid seq | RVK |
| Microexon-tag DNA Seq | ATTTCTCGGCTCTCCTTTGCTGTTGAGTTAGCAGAAGAATTTTATGGAAGAGTAAAGGGACAAGATGTTGCTTTCGAACCTTCAAAGCTCCTTTGGCTTATCCAGCGT |
| Microexon-tag Amino Acid Seq | ISRLSFAVELAEEFYGRVKGQDVAFEPSKLLWLIQR |
| Microexon-tag spanning region | 13160829-13161127 |
| Microexon-tag prediction score | 0.9632 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC03T0221400ZSx |
| Reference Transcript ID | BnaC03T0221400ZS |
| Gene ID | BnaC03G0221400ZS |
| Gene Name | NA |
| Transcript ID | BnaC03T0221400ZS |
| Protein ID | |
| Gene ID | BnaC03G0221400ZS |
| Gene Name | |
| Pfam domain motif | GBP |
| Motif E-value | 1.70E-37 |
| Motif start | 42 |
| Motif end | 288 |
| Protein seq | >BnaC03T0221400ZS MEISHRTFAFLLSLCLLLQTSLSIENFHQAFPIVEPDPNHTKLRLSREGLEAISRITTPIAAVAVIGPYRSGKSFLLNQL LSLSCYEGFGVGHMRDTKTKGIWVWGTPLELEIDGVKTSIIYLDTEGFESVGKSNVYDDRIFALATVMSSVLIYNLPETI READISRLSFAVELAEEFYGRVKGQDVAFEPSKLLWLIQRDFLQGKSVKEMVDEALRHVPNEDGNKNIDQVNRIRDSLAI MGDNSTAFSLPQPHLMRTKLCDLKDEDLDSTYVARRDQLKKLVASILRPKIVQGKALNGKEFISFLEQILDALNKGEIPS TGSLVEVFNKDIVERCVKQYHERMVKLRLPMSEEHLQGAHETAHDEALKAFDAQHFGRQHAKKSVDQLDEQMKEVFKNFV LANEYQSSKLCEALYTKCEDDMDHLQSLRLPSMAKFNAGFVYCNQSFEHQCVGPSKQNYEQRLTKMMGKARSLFIKEYNN RLFNWLVAFSLVMVVVGRFIIKFILLEMAAWILFIFLETYTRMFWTAESLYYNPVWHFIVGTWETVVYSPVLDLDRWAIP LVCIIALCVLYWRCYGKRKHGSSWLLPMYNNQKNGRNRERSE* |
| CDS seq | >BnaC03T0221400ZS ATGGAGATTTCTCACCGAACCTTTGCTTTCTTGTTGTCACTCTGCCTCTTGCTGCAAACGTCTCTCTCGATCGAGAATTT TCACCAAGCGTTTCCTATAGTGGAACCTGATCCGAATCATACGAAGCTTCGTCTTAGCAGAGAAGGTTTGGAAGCTATTA GCAGAATCACTACTCCCATCGCTGCTGTTGCGGTGATTGGCCCCTATCGTTCTGGAAAGTCTTTTCTACTCAATCAGCTT CTTTCCCTTTCCTGTTATGAAGGTTTTGGTGTTGGGCACATGCGTGATACCAAAACAAAAGGGATTTGGGTATGGGGAAC ACCACTAGAGCTAGAGATCGACGGAGTAAAAACTTCCATTATTTACCTCGACACTGAAGGATTCGAAAGTGTTGGGAAGT CCAATGTTTATGACGATCGAATATTTGCTCTGGCAACGGTGATGAGTTCTGTGCTTATCTATAATCTGCCTGAAACTATA CGCGAAGCTGATATTTCTCGGCTCTCCTTTGCTGTTGAGTTAGCAGAAGAATTTTATGGAAGAGTAAAGGGACAAGATGT TGCTTTCGAACCTTCAAAGCTCCTTTGGCTTATCCAGCGTGATTTTCTGCAAGGGAAATCTGTAAAGGAAATGGTGGATG AAGCACTCAGACACGTCCCTAATGAAGATGGTAACAAAAATATTGATCAGGTTAACCGGATCCGGGACTCCTTGGCTATT ATGGGTGATAACAGCACAGCCTTTAGCTTACCACAGCCCCATCTCATGAGGACAAAGCTATGTGATCTGAAGGACGAGGA CCTGGACTCTACCTATGTTGCAAGGCGTGATCAATTGAAAAAGCTCGTTGCTAGTATTCTCCGCCCAAAGATAGTGCAGG GGAAAGCACTTAATGGAAAGGAATTTATTTCTTTCCTTGAACAGATATTGGATGCGCTAAATAAAGGAGAGATCCCATCA ACAGGGTCACTAGTTGAGGTTTTCAATAAAGATATCGTTGAGAGATGTGTGAAACAGTACCACGAGAGGATGGTGAAATT GCGGCTACCTATGTCTGAAGAACATCTCCAAGGTGCCCATGAAACTGCACATGATGAAGCTTTAAAAGCATTTGATGCTC AACATTTTGGAAGACAGCATGCAAAGAAATCTGTGGATCAGTTGGATGAACAAATGAAGGAGGTATTCAAGAATTTTGTT CTTGCAAATGAGTACCAATCGTCAAAGCTCTGTGAGGCGCTATATACAAAGTGTGAAGATGACATGGACCACTTGCAATC TCTCCGGCTCCCTTCCATGGCTAAGTTCAATGCAGGTTTCGTGTACTGCAACCAAAGTTTTGAACACCAATGTGTTGGTC CTTCGAAACAAAACTATGAACAAAGGTTAACCAAGATGATGGGAAAGGCACGGTCTCTGTTCATCAAAGAATACAATAAC AGACTGTTCAACTGGCTTGTTGCGTTCTCTCTTGTAATGGTGGTTGTGGGACGGTTCATTATAAAATTCATTTTATTAGA AATGGCGGCATGGATACTCTTCATATTCTTGGAGACATACACAAGGATGTTCTGGACAGCAGAGTCTCTTTATTACAACC CAGTCTGGCATTTCATTGTTGGGACATGGGAAACTGTAGTGTATAGTCCCGTTCTCGACTTGGACAGATGGGCGATTCCT CTAGTCTGCATAATTGCATTGTGTGTGCTTTATTGGCGGTGTTATGGGAAGAGGAAACATGGGTCTAGTTGGCTTCTTCC GATGTACAACAACCAGAAGAATGGTCGGAACAGGGAACGGTCAGAGTAA |
Bn_scaffoldC03:13160983-13160989:+ does not have available information here.