| Microexon ID | Bn_scaffoldA03:9771581-9771587:+ |
| Species | Brassica Napus | Coordinates | scaffoldA03:9771581..9771587 |
| Microexon Cluster ID | MEP15 |
| Size | 7 |
| Phase | 2 |
| Pfam Domain Motif | GBP |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,7,51 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | AGTAAAG |
| Microexon Amino Acid seq | RVK |
| Microexon-tag DNA Seq | ATTTCTCGGCTCTCCTTTGCTGTTGAGTTAGCAGAAGAATTTTATGGAAGAGTAAAGGGACAAGATGTTGCTTTCGAACCTTCAAAGCTTCTGTGGCTTATCCAGCGT |
| Microexon-tag Amino Acid Seq | ISRLSFAVELAEEFYGRVKGQDVAFEPSKLLWLIQR |
| Microexon-tag spanning region | 9771429-9771725 |
| Microexon-tag prediction score | 0.9687 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaA03T0188300ZSx |
| Reference Transcript ID | BnaA03T0188300ZS |
| Gene ID | BnaA03G0188300ZS |
| Gene Name | NA |
| Transcript ID | BnaA03T0188300ZS |
| Protein ID | |
| Gene ID | BnaA03G0188300ZS |
| Gene Name | |
| Pfam domain motif | GBP |
| Motif E-value | 1.40E-37 |
| Motif start | 42 |
| Motif end | 288 |
| Protein seq | >BnaA03T0188300ZS MEISHRTFVFLLSLCLLLQTSLSIENFHQAFPIVEPDPNHTKLRLSREGLEAISRITTPIAAVAVIGPYRSGKSFLLNQL LSLSCYEGFGVGHMRDTKTKGIWVWGTPLELEIDGVKTSIIYLDTEGFESVGKSNVYDDRIFALATVMSSVLIYNLPETI READISRLSFAVELAEEFYGRVKGQDVAFEPSKLLWLIQRDFLQGKSVKEMVDEALQHVPNEDGNKNIDQVNRIRDSLAI MGDNSTAFSLPQPHLMRTKLCDLKDEDLDSTYVARRDQLKKLVASILRPKIVQGKALNGKEFISFLEQILDALNKGEIPS TGSLVEVFNKDIVERCVKQYHERMVKLRLPMSEEHLQSAHETAHDEALKAFDAQHFGRQHAKKSVDQLDEQMKEVFKNFV LANEYQSSKLCEALYTKCEDDMDHLQSLRLPSMAKFNAGFVYCNQSFEHQCVGPSKQNYEQRLTKMMGKARSLFIKEYNN RLFNWLVAFSLVMVIVGRFIIKFILLEMAAWILFIFLETYTRMFWTAESLYYNPVWHFIVGTWETVVYSPVLDLDRWAIP IVCIIALCVLYWRCYGKRKHGSSWLLPMYNNQKNGRNRERSE* |
| CDS seq | >BnaA03T0188300ZS ATGGAGATTTCTCATCGAACCTTTGTTTTCTTATTGTCTCTCTGCCTCTTGCTGCAAACATCTCTCTCGATCGAGAATTT TCACCAAGCGTTTCCTATAGTGGAACCTGATCCGAATCATACGAAGCTTCGTCTTAGCAGAGAAGGTTTGGAAGCTATTA GCAGAATCACTACTCCTATCGCTGCTGTTGCGGTGATTGGCCCGTATCGTTCTGGAAAGTCTTTTCTACTCAATCAGCTT CTTTCCCTTTCCTGTTATGAAGGTTTTGGTGTTGGACACATGCGTGATACCAAAACAAAAGGGATTTGGGTATGGGGAAC GCCACTAGAGCTAGAGATTGACGGAGTAAAAACTTCCATTATTTACCTCGACACTGAAGGATTCGAAAGTGTTGGCAAGT CTAATGTTTATGACGATCGAATATTTGCTTTGGCAACGGTTATGAGTTCTGTGCTTATCTATAATCTGCCTGAAACTATA CGCGAAGCTGATATTTCTCGGCTCTCCTTTGCTGTTGAGTTAGCAGAAGAATTTTATGGAAGAGTAAAGGGACAAGATGT TGCTTTCGAACCTTCAAAGCTTCTGTGGCTTATCCAGCGTGATTTTCTGCAAGGAAAATCTGTGAAGGAAATGGTAGATG AAGCTCTCCAACATGTCCCTAATGAAGATGGTAACAAAAATATTGATCAGGTTAACCGGATCCGGGACTCCCTGGCTATT ATGGGTGACAACAGCACAGCCTTTAGCTTACCGCAGCCCCACCTCATGAGGACAAAGCTGTGTGACCTGAAGGACGAGGA CCTAGACTCTACCTATGTTGCCAGGCGTGATCAGTTGAAAAAGCTCGTTGCTAGTATTCTCCGCCCAAAGATAGTGCAGG GGAAAGCACTAAATGGAAAGGAATTTATTTCTTTCCTGGAACAGATATTGGATGCGCTAAATAAAGGAGAGATCCCATCA ACAGGGTCACTAGTTGAGGTTTTCAATAAAGATATCGTTGAGAGATGTGTAAAGCAGTACCACGAGAGGATGGTGAAATT GCGGCTACCTATGTCTGAAGAACATCTCCAAAGTGCCCATGAAACGGCCCATGATGAAGCTTTAAAAGCATTTGATGCTC AACATTTTGGAAGACAGCATGCAAAGAAATCTGTGGATCAGTTGGATGAACAAATGAAGGAGGTATTCAAGAATTTTGTT CTTGCAAATGAGTACCAATCTTCAAAGCTCTGTGAGGCGCTATATACAAAGTGTGAAGATGACATGGACCACTTACAATC TCTCCGGCTCCCTTCCATGGCTAAGTTCAATGCAGGTTTCGTGTACTGCAACCAAAGTTTTGAACACCAATGTGTTGGTC CTTCGAAACAAAACTATGAACAGAGGTTAACCAAGATGATGGGAAAGGCACGGTCTCTGTTCATCAAAGAATACAATAAC AGACTGTTCAACTGGCTTGTTGCGTTCTCTCTTGTAATGGTGATTGTGGGACGGTTCATAATAAAATTCATTTTATTAGA AATGGCGGCATGGATACTCTTCATATTCTTGGAGACATACACAAGGATGTTTTGGACAGCAGAGTCTCTTTATTACAACC CAGTGTGGCATTTCATTGTTGGGACATGGGAAACTGTAGTGTATAGTCCGGTGCTCGACTTGGACAGATGGGCGATTCCT ATAGTCTGCATAATTGCATTGTGTGTGCTTTATTGGCGGTGTTATGGGAAGAGGAAACATGGGTCTAGTTGGCTTCTTCC GATGTACAACAACCAGAAGAATGGTCGGAACAGGGAACGGTCAGAGTAA |
Bn_scaffoldA03:9771581-9771587:+ does not have available information here.