
Microexon ID | At_2:16229150-16229156:+ |
Species | Arabidopsis thaliana | Coordinates | 2:16229150..16229156 |
Microexon Cluster ID | MEP15 |
Size | 7 |
Phase | 2 |
Pfam Domain Motif | GBP |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,7,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGTAAAG |
Microexon Amino Acid seq | RVK |
Microexon-tag DNA Seq | ATTTCTCGGCTCTCCTTTGCTGTTGAGCTTGCGGAAGAATTTTATGGAAGAGTAAAGGGTGAAGATGTTGCTTTTGAACCGTCAAAGCTTCTGTGGCTTATCCAGCGT |
Microexon-tag Amino Acid Seq | ISRLSFAVELAEEFYGRVKGEDVAFEPSKLLWLIQR |
Microexon-tag spanning region | 16228994-16229288 |
Microexon-tag prediction score | 0.9709 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT2G38840.1x |
Reference Transcript ID | AT2G38840.1 |
Gene ID | AT2G38840 |
Gene Name | NA |
Transcript ID | AT2G38840.1 |
Protein ID | AT2G38840.1 |
Gene ID | AT2G38840 |
Gene Name | NA |
Pfam domain motif | GBP |
Motif E-value | 7.6e-39 |
Motif start | 42 |
Motif end | 286 |
Protein seq | >AT2G38840.1 MEIPRRTFVFFFSLCLLSSTSLSIDNFHQAFPIVEPAPGHTKLQLSREGLEAISRITTPISAVAVIGPYRSGKSFLLNQL LSLSCYEGFGVGHMRDTKTKGIWVWGTPLELEIDGVKTSVIYLDTEGFESVGKSNVYDDRIFALATVMSSVLIYNLPETI READISRLSFAVELAEEFYGRVKGEDVAFEPSKLLWLIQRDFLQGKSVKQMVDEALRHVPNEDGNKNIDQVNQIRDSLAI MGDNSTAFSLPQPHLMRTKLCDLKDEDLDSTYVARRDQLKKLVASIIRPKIVQGKTLNGKEFISFLEQILDALNKGEIPS TGSLVEVFNKDIVERCVKLYNEKMVRVRLPMSEESLQSAHEMAHNEAIKAFDAQHFGRQHAKKSVDQLDEQMQEVYKNFV LANEYQSSKLCEALYTSCEDDMDHLQALRLPSMAKFNAGFVYCNKTFEQQCVGPSKQNYEQRLTKMMGKSRSLFIKEYNN RLFNWLVGFSLVMVVVGRFIIKFILLEMAAWILFIFLETYTRMFWTAEALYYNPVWHFIVGTWENVVYSPVLDLDRWAIP IVCIIALCVLYWRCYGKRKHGARWLLPLYNNQKNGRNRERSE* |
CDS seq | >AT2G38840.1 ATGGAGATTCCTCGCCGGACCTTTGTTTTCTTCTTCTCTCTTTGTCTCTTGTCGTCAACGTCTCTCTCCATCGATAATTT TCACCAAGCTTTTCCTATTGTTGAACCTGCTCCGGGTCATACAAAGCTTCAGCTTAGCAGAGAAGGTCTGGAAGCAATTA GCAGAATTACAACTCCTATTTCTGCTGTTGCGGTGATTGGCCCATATCGTTCTGGAAAATCATTTCTACTCAATCAGCTT CTTTCTCTTTCTTGTTATGAAGGTTTTGGTGTTGGACACATGCGTGATACCAAAACAAAAGGTATTTGGGTCTGGGGAAC ACCATTAGAGCTGGAGATTGATGGAGTAAAAACTTCCGTAATTTACCTCGACACTGAGGGATTCGAAAGTGTTGGAAAGT CAAATGTTTATGATGACCGGATTTTTGCCCTGGCAACGGTTATGAGTTCTGTGCTTATCTATAATCTGCCTGAAACTATC CGTGAAGCTGATATTTCTCGGCTCTCCTTTGCTGTTGAGCTTGCGGAAGAATTTTATGGAAGAGTAAAGGGTGAAGATGT TGCTTTTGAACCGTCAAAGCTTCTGTGGCTTATCCAGCGTGATTTTCTGCAAGGGAAATCGGTGAAGCAAATGGTGGATG AAGCTCTCAGACATGTCCCTAATGAAGATGGTAACAAAAATATTGACCAGGTTAACCAGATTCGGGACTCCTTGGCTATA ATGGGTGACAACAGCACAGCCTTTAGCTTACCGCAGCCTCATCTCATGCGTACGAAGCTGTGTGATCTGAAGGATGAGGA CCTGGATTCTACATATGTTGCAAGGCGTGACCAATTGAAAAAGCTCGTTGCTAGTATTATCCGCCCAAAGATAGTGCAGG GGAAAACACTAAACGGGAAGGAATTTATTTCTTTCCTGGAACAGATATTGGATGCGTTAAATAAAGGAGAGATCCCATCA ACAGGATCACTAGTTGAGGTTTTCAATAAAGATATTGTTGAGAGATGTGTGAAGCTGTACAATGAGAAGATGGTAAGAGT GCGACTACCTATGTCCGAAGAATCTCTCCAAAGTGCCCATGAAATGGCGCATAATGAAGCTATCAAAGCATTTGATGCAC AACATTTTGGCAGACAACATGCAAAGAAATCTGTCGATCAGTTGGATGAACAAATGCAGGAGGTATATAAGAATTTTGTT CTTGCAAATGAATACCAATCGTCGAAGCTCTGTGAGGCGCTATATACAAGTTGTGAAGATGACATGGACCACTTACAGGC TCTCCGACTCCCTTCCATGGCTAAATTTAATGCAGGTTTTGTGTACTGCAACAAAACGTTTGAGCAGCAATGTGTTGGTC CTTCAAAACAAAATTATGAGCAAAGATTAACTAAGATGATGGGAAAGTCACGGTCTTTGTTCATCAAAGAATACAATAAC CGACTGTTCAACTGGCTGGTTGGGTTCTCTCTTGTAATGGTGGTTGTGGGCCGGTTTATCATAAAATTCATTTTATTAGA AATGGCGGCGTGGATACTTTTCATATTCTTGGAGACATACACAAGGATGTTCTGGACAGCAGAAGCTCTTTATTACAACC CAGTCTGGCATTTCATCGTTGGGACATGGGAAAATGTCGTGTATAGTCCTGTTCTCGACTTGGACAGATGGGCGATTCCT ATAGTCTGCATAATTGCACTTTGTGTGCTATATTGGCGGTGTTATGGAAAGAGGAAACACGGGGCTCGCTGGCTTCTTCC GCTGTACAACAACCAGAAGAATGGCCGGAATAGGGAACGGTCTGAGTAA |
Microexon DNA seq | AGTAAAG |
Microexon Amino Acid seq | RVK |
Microexon-tag DNA Seq | ATTTCTCGGCTCTCCTTTGCTGTTGAGCTTGCGGAAGAATTTTATGGAAGAGTAAAGGGTGAAGATGTTGCTTTTGAACCGTCAAAGCTTCTGTGGCTTATCCAGCGT |
Microexon-tag Amino Acid seq | ISRLSFAVELAEEFYGRVKGEDVAFEPSKLLWLIQR |
Transcript ID | AT2G38840.1 |
Gene ID | At.10798 |
Gene Name | NA |
Pfam domain motif | GBP |
Motif E-value | 7.6e-39 |
Motif start | 42 |
Motif end | 286 |
Protein seq | >AT2G38840.1 MEIPRRTFVFFFSLCLLSSTSLSIDNFHQAFPIVEPAPGHTKLQLSREGLEAISRITTPISAVAVIGPYRSGKSFLLNQL LSLSCYEGFGVGHMRDTKTKGIWVWGTPLELEIDGVKTSVIYLDTEGFESVGKSNVYDDRIFALATVMSSVLIYNLPETI READISRLSFAVELAEEFYGRVKGEDVAFEPSKLLWLIQRDFLQGKSVKQMVDEALRHVPNEDGNKNIDQVNQIRDSLAI MGDNSTAFSLPQPHLMRTKLCDLKDEDLDSTYVARRDQLKKLVASIIRPKIVQGKTLNGKEFISFLEQILDALNKGEIPS TGSLVEVFNKDIVERCVKLYNEKMVRVRLPMSEESLQSAHEMAHNEAIKAFDAQHFGRQHAKKSVDQLDEQMQEVYKNFV LANEYQSSKLCEALYTSCEDDMDHLQALRLPSMAKFNAGFVYCNKTFEQQCVGPSKQNYEQRLTKMMGKSRSLFIKEYNN RLFNWLVGFSLVMVVVGRFIIKFILLEMAAWILFIFLETYTRMFWTAEALYYNPVWHFIVGTWENVVYSPVLDLDRWAIP IVCIIALCVLYWRCYGKRKHGARWLLPLYNNQKNGRNRERSE* |
CDS seq | >AT2G38840.1 ATGGAGATTCCTCGCCGGACCTTTGTTTTCTTCTTCTCTCTTTGTCTCTTGTCGTCAACGTCTCTCTCCATCGATAATTT TCACCAAGCTTTTCCTATTGTTGAACCTGCTCCGGGTCATACAAAGCTTCAGCTTAGCAGAGAAGGTCTGGAAGCAATTA GCAGAATTACAACTCCTATTTCTGCTGTTGCGGTGATTGGCCCATATCGTTCTGGAAAATCATTTCTACTCAATCAGCTT CTTTCTCTTTCTTGTTATGAAGGTTTTGGTGTTGGACACATGCGTGATACCAAAACAAAAGGTATTTGGGTCTGGGGAAC ACCATTAGAGCTGGAGATTGATGGAGTAAAAACTTCCGTAATTTACCTCGACACTGAGGGATTCGAAAGTGTTGGAAAGT CAAATGTTTATGATGACCGGATTTTTGCCCTGGCAACGGTTATGAGTTCTGTGCTTATCTATAATCTGCCTGAAACTATC CGTGAAGCTGATATTTCTCGGCTCTCCTTTGCTGTTGAGCTTGCGGAAGAATTTTATGGAAGAGTAAAGGGTGAAGATGT TGCTTTTGAACCGTCAAAGCTTCTGTGGCTTATCCAGCGTGATTTTCTGCAAGGGAAATCGGTGAAGCAAATGGTGGATG AAGCTCTCAGACATGTCCCTAATGAAGATGGTAACAAAAATATTGACCAGGTTAACCAGATTCGGGACTCCTTGGCTATA ATGGGTGACAACAGCACAGCCTTTAGCTTACCGCAGCCTCATCTCATGCGTACGAAGCTGTGTGATCTGAAGGATGAGGA CCTGGATTCTACATATGTTGCAAGGCGTGACCAATTGAAAAAGCTCGTTGCTAGTATTATCCGCCCAAAGATAGTGCAGG GGAAAACACTAAACGGGAAGGAATTTATTTCTTTCCTGGAACAGATATTGGATGCGTTAAATAAAGGAGAGATCCCATCA ACAGGATCACTAGTTGAGGTTTTCAATAAAGATATTGTTGAGAGATGTGTGAAGCTGTACAATGAGAAGATGGTAAGAGT GCGACTACCTATGTCCGAAGAATCTCTCCAAAGTGCCCATGAAATGGCGCATAATGAAGCTATCAAAGCATTTGATGCAC AACATTTTGGCAGACAACATGCAAAGAAATCTGTCGATCAGTTGGATGAACAAATGCAGGAGGTATATAAGAATTTTGTT CTTGCAAATGAATACCAATCGTCGAAGCTCTGTGAGGCGCTATATACAAGTTGTGAAGATGACATGGACCACTTACAGGC TCTCCGACTCCCTTCCATGGCTAAATTTAATGCAGGTTTTGTGTACTGCAACAAAACGTTTGAGCAGCAATGTGTTGGTC CTTCAAAACAAAATTATGAGCAAAGATTAACTAAGATGATGGGAAAGTCACGGTCTTTGTTCATCAAAGAATACAATAAC CGACTGTTCAACTGGCTGGTTGGGTTCTCTCTTGTAATGGTGGTTGTGGGCCGGTTTATCATAAAATTCATTTTATTAGA AATGGCGGCGTGGATACTTTTCATATTCTTGGAGACATACACAAGGATGTTCTGGACAGCAGAAGCTCTTTATTACAACC CAGTCTGGCATTTCATCGTTGGGACATGGGAAAATGTCGTGTATAGTCCTGTTCTCGACTTGGACAGATGGGCGATTCCT ATAGTCTGCATAATTGCACTTTGTGTGCTATATTGGCGGTGTTATGGAAAGAGGAAACACGGGGCTCGCTGGCTTCTTCC GCTGTACAACAACCAGAAGAATGGCCGGAATAGGGAACGGTCTGAGTAA |