Microexon ID At_2:16229150-16229156:+
Species Arabidopsis thaliana
Coordinates 2:16229150..16229156
Microexon Cluster ID MEP15
Size 7
Phase 2
Pfam Domain Motif GBP
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 50,7,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AGTAAAG
Microexon Amino Acid seq RVK
Microexon-tag DNA Seq ATTTCTCGGCTCTCCTTTGCTGTTGAGCTTGCGGAAGAATTTTATGGAAGAGTAAAGGGTGAAGATGTTGCTTTTGAACCGTCAAAGCTTCTGTGGCTTATCCAGCGT
Microexon-tag Amino Acid Seq ISRLSFAVELAEEFYGRVKGEDVAFEPSKLLWLIQR
Microexon-tag spanning region16228994-16229288
Microexon-tag prediction score0.9709
Overlapped with the annotated transcript (%) 100
New Transcript ID AT2G38840.1x
Reference Transcript ID AT2G38840.1
Gene ID AT2G38840
Gene Name NA
Transcript ID AT2G38840.1
Protein ID AT2G38840.1
Gene ID AT2G38840
Gene Name NA
Pfam domain motif GBP
Motif E-value 7.6e-39
Motif start 42
Motif end 286
Protein seq >AT2G38840.1
MEIPRRTFVFFFSLCLLSSTSLSIDNFHQAFPIVEPAPGHTKLQLSREGLEAISRITTPISAVAVIGPYRSGKSFLLNQL
LSLSCYEGFGVGHMRDTKTKGIWVWGTPLELEIDGVKTSVIYLDTEGFESVGKSNVYDDRIFALATVMSSVLIYNLPETI
READISRLSFAVELAEEFYGRVKGEDVAFEPSKLLWLIQRDFLQGKSVKQMVDEALRHVPNEDGNKNIDQVNQIRDSLAI
MGDNSTAFSLPQPHLMRTKLCDLKDEDLDSTYVARRDQLKKLVASIIRPKIVQGKTLNGKEFISFLEQILDALNKGEIPS
TGSLVEVFNKDIVERCVKLYNEKMVRVRLPMSEESLQSAHEMAHNEAIKAFDAQHFGRQHAKKSVDQLDEQMQEVYKNFV
LANEYQSSKLCEALYTSCEDDMDHLQALRLPSMAKFNAGFVYCNKTFEQQCVGPSKQNYEQRLTKMMGKSRSLFIKEYNN
RLFNWLVGFSLVMVVVGRFIIKFILLEMAAWILFIFLETYTRMFWTAEALYYNPVWHFIVGTWENVVYSPVLDLDRWAIP
IVCIIALCVLYWRCYGKRKHGARWLLPLYNNQKNGRNRERSE*
CDS seq >AT2G38840.1
ATGGAGATTCCTCGCCGGACCTTTGTTTTCTTCTTCTCTCTTTGTCTCTTGTCGTCAACGTCTCTCTCCATCGATAATTT
TCACCAAGCTTTTCCTATTGTTGAACCTGCTCCGGGTCATACAAAGCTTCAGCTTAGCAGAGAAGGTCTGGAAGCAATTA
GCAGAATTACAACTCCTATTTCTGCTGTTGCGGTGATTGGCCCATATCGTTCTGGAAAATCATTTCTACTCAATCAGCTT
CTTTCTCTTTCTTGTTATGAAGGTTTTGGTGTTGGACACATGCGTGATACCAAAACAAAAGGTATTTGGGTCTGGGGAAC
ACCATTAGAGCTGGAGATTGATGGAGTAAAAACTTCCGTAATTTACCTCGACACTGAGGGATTCGAAAGTGTTGGAAAGT
CAAATGTTTATGATGACCGGATTTTTGCCCTGGCAACGGTTATGAGTTCTGTGCTTATCTATAATCTGCCTGAAACTATC
CGTGAAGCTGATATTTCTCGGCTCTCCTTTGCTGTTGAGCTTGCGGAAGAATTTTATGGAAGAGTAAAGGGTGAAGATGT
TGCTTTTGAACCGTCAAAGCTTCTGTGGCTTATCCAGCGTGATTTTCTGCAAGGGAAATCGGTGAAGCAAATGGTGGATG
AAGCTCTCAGACATGTCCCTAATGAAGATGGTAACAAAAATATTGACCAGGTTAACCAGATTCGGGACTCCTTGGCTATA
ATGGGTGACAACAGCACAGCCTTTAGCTTACCGCAGCCTCATCTCATGCGTACGAAGCTGTGTGATCTGAAGGATGAGGA
CCTGGATTCTACATATGTTGCAAGGCGTGACCAATTGAAAAAGCTCGTTGCTAGTATTATCCGCCCAAAGATAGTGCAGG
GGAAAACACTAAACGGGAAGGAATTTATTTCTTTCCTGGAACAGATATTGGATGCGTTAAATAAAGGAGAGATCCCATCA
ACAGGATCACTAGTTGAGGTTTTCAATAAAGATATTGTTGAGAGATGTGTGAAGCTGTACAATGAGAAGATGGTAAGAGT
GCGACTACCTATGTCCGAAGAATCTCTCCAAAGTGCCCATGAAATGGCGCATAATGAAGCTATCAAAGCATTTGATGCAC
AACATTTTGGCAGACAACATGCAAAGAAATCTGTCGATCAGTTGGATGAACAAATGCAGGAGGTATATAAGAATTTTGTT
CTTGCAAATGAATACCAATCGTCGAAGCTCTGTGAGGCGCTATATACAAGTTGTGAAGATGACATGGACCACTTACAGGC
TCTCCGACTCCCTTCCATGGCTAAATTTAATGCAGGTTTTGTGTACTGCAACAAAACGTTTGAGCAGCAATGTGTTGGTC
CTTCAAAACAAAATTATGAGCAAAGATTAACTAAGATGATGGGAAAGTCACGGTCTTTGTTCATCAAAGAATACAATAAC
CGACTGTTCAACTGGCTGGTTGGGTTCTCTCTTGTAATGGTGGTTGTGGGCCGGTTTATCATAAAATTCATTTTATTAGA
AATGGCGGCGTGGATACTTTTCATATTCTTGGAGACATACACAAGGATGTTCTGGACAGCAGAAGCTCTTTATTACAACC
CAGTCTGGCATTTCATCGTTGGGACATGGGAAAATGTCGTGTATAGTCCTGTTCTCGACTTGGACAGATGGGCGATTCCT
ATAGTCTGCATAATTGCACTTTGTGTGCTATATTGGCGGTGTTATGGAAAGAGGAAACACGGGGCTCGCTGGCTTCTTCC
GCTGTACAACAACCAGAAGAATGGCCGGAATAGGGAACGGTCTGAGTAA
Microexon DNA seq AGTAAAG
Microexon Amino Acid seq RVK
Microexon-tag DNA Seq ATTTCTCGGCTCTCCTTTGCTGTTGAGCTTGCGGAAGAATTTTATGGAAGAGTAAAGGGTGAAGATGTTGCTTTTGAACCGTCAAAGCTTCTGTGGCTTATCCAGCGT
Microexon-tag Amino Acid seq ISRLSFAVELAEEFYGRVKGEDVAFEPSKLLWLIQR
Transcript ID AT2G38840.1
Gene ID At.10798
Gene Name NA
Pfam domain motif GBP
Motif E-value 7.6e-39
Motif start 42
Motif end 286
Protein seq >AT2G38840.1
MEIPRRTFVFFFSLCLLSSTSLSIDNFHQAFPIVEPAPGHTKLQLSREGLEAISRITTPISAVAVIGPYRSGKSFLLNQL
LSLSCYEGFGVGHMRDTKTKGIWVWGTPLELEIDGVKTSVIYLDTEGFESVGKSNVYDDRIFALATVMSSVLIYNLPETI
READISRLSFAVELAEEFYGRVKGEDVAFEPSKLLWLIQRDFLQGKSVKQMVDEALRHVPNEDGNKNIDQVNQIRDSLAI
MGDNSTAFSLPQPHLMRTKLCDLKDEDLDSTYVARRDQLKKLVASIIRPKIVQGKTLNGKEFISFLEQILDALNKGEIPS
TGSLVEVFNKDIVERCVKLYNEKMVRVRLPMSEESLQSAHEMAHNEAIKAFDAQHFGRQHAKKSVDQLDEQMQEVYKNFV
LANEYQSSKLCEALYTSCEDDMDHLQALRLPSMAKFNAGFVYCNKTFEQQCVGPSKQNYEQRLTKMMGKSRSLFIKEYNN
RLFNWLVGFSLVMVVVGRFIIKFILLEMAAWILFIFLETYTRMFWTAEALYYNPVWHFIVGTWENVVYSPVLDLDRWAIP
IVCIIALCVLYWRCYGKRKHGARWLLPLYNNQKNGRNRERSE*
CDS seq >AT2G38840.1
ATGGAGATTCCTCGCCGGACCTTTGTTTTCTTCTTCTCTCTTTGTCTCTTGTCGTCAACGTCTCTCTCCATCGATAATTT
TCACCAAGCTTTTCCTATTGTTGAACCTGCTCCGGGTCATACAAAGCTTCAGCTTAGCAGAGAAGGTCTGGAAGCAATTA
GCAGAATTACAACTCCTATTTCTGCTGTTGCGGTGATTGGCCCATATCGTTCTGGAAAATCATTTCTACTCAATCAGCTT
CTTTCTCTTTCTTGTTATGAAGGTTTTGGTGTTGGACACATGCGTGATACCAAAACAAAAGGTATTTGGGTCTGGGGAAC
ACCATTAGAGCTGGAGATTGATGGAGTAAAAACTTCCGTAATTTACCTCGACACTGAGGGATTCGAAAGTGTTGGAAAGT
CAAATGTTTATGATGACCGGATTTTTGCCCTGGCAACGGTTATGAGTTCTGTGCTTATCTATAATCTGCCTGAAACTATC
CGTGAAGCTGATATTTCTCGGCTCTCCTTTGCTGTTGAGCTTGCGGAAGAATTTTATGGAAGAGTAAAGGGTGAAGATGT
TGCTTTTGAACCGTCAAAGCTTCTGTGGCTTATCCAGCGTGATTTTCTGCAAGGGAAATCGGTGAAGCAAATGGTGGATG
AAGCTCTCAGACATGTCCCTAATGAAGATGGTAACAAAAATATTGACCAGGTTAACCAGATTCGGGACTCCTTGGCTATA
ATGGGTGACAACAGCACAGCCTTTAGCTTACCGCAGCCTCATCTCATGCGTACGAAGCTGTGTGATCTGAAGGATGAGGA
CCTGGATTCTACATATGTTGCAAGGCGTGACCAATTGAAAAAGCTCGTTGCTAGTATTATCCGCCCAAAGATAGTGCAGG
GGAAAACACTAAACGGGAAGGAATTTATTTCTTTCCTGGAACAGATATTGGATGCGTTAAATAAAGGAGAGATCCCATCA
ACAGGATCACTAGTTGAGGTTTTCAATAAAGATATTGTTGAGAGATGTGTGAAGCTGTACAATGAGAAGATGGTAAGAGT
GCGACTACCTATGTCCGAAGAATCTCTCCAAAGTGCCCATGAAATGGCGCATAATGAAGCTATCAAAGCATTTGATGCAC
AACATTTTGGCAGACAACATGCAAAGAAATCTGTCGATCAGTTGGATGAACAAATGCAGGAGGTATATAAGAATTTTGTT
CTTGCAAATGAATACCAATCGTCGAAGCTCTGTGAGGCGCTATATACAAGTTGTGAAGATGACATGGACCACTTACAGGC
TCTCCGACTCCCTTCCATGGCTAAATTTAATGCAGGTTTTGTGTACTGCAACAAAACGTTTGAGCAGCAATGTGTTGGTC
CTTCAAAACAAAATTATGAGCAAAGATTAACTAAGATGATGGGAAAGTCACGGTCTTTGTTCATCAAAGAATACAATAAC
CGACTGTTCAACTGGCTGGTTGGGTTCTCTCTTGTAATGGTGGTTGTGGGCCGGTTTATCATAAAATTCATTTTATTAGA
AATGGCGGCGTGGATACTTTTCATATTCTTGGAGACATACACAAGGATGTTCTGGACAGCAGAAGCTCTTTATTACAACC
CAGTCTGGCATTTCATCGTTGGGACATGGGAAAATGTCGTGTATAGTCCTGTTCTCGACTTGGACAGATGGGCGATTCCT
ATAGTCTGCATAATTGCACTTTGTGTGCTATATTGGCGGTGTTATGGAAAGAGGAAACACGGGGCTCGCTGGCTTCTTCC
GCTGTACAACAACCAGAAGAATGGCCGGAATAGGGAACGGTCTGAGTAA