
Microexon ID | Zm_5:163057287-163057293:+ |
Species | Zea mays | Coordinates | 5:163057287..163057293 |
Microexon Cluster ID | MEP14 |
Size | 7 |
Phase | 1 |
Pfam Domain Motif | Prefoldin_2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,7,49 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTGGAGGARCTGMRVCARYTRYCTGATGAYACAAAYACWTACAARTCYATWGGRARAAYGTTTRTTTTRGAGCCMAARTCAGTTYTRRTGRATGARCARGARMARAAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Zm_5:163057287-163057293:+ does not have available information here.
Transcript ID | Zm00001d016458_T002 |
Protein ID | Zm00001d016458_P002 |
Gene ID | Zm00001d016458 |
Gene Name | NA |
Pfam domain motif | Prefoldin_2 |
Motif E-value | 2.7e-16 |
Motif start | 54 |
Motif end | 143 |
Protein seq | >Zm00001d016458_P002 MADDANRAAFMELQSRMIDTTAKIKQVAPLVPFSDRFHRFRSCLILGLFSCRVLLQTQMRSKEGEKKRAYLTLEELRQLP DDTNTYKTVGKVFILEPKSVLFNEQEQKLNDSESAIASMQTSKDYLEKQQGEVENNIRELLQQDPGLARQILSMTVQ* |
CDS seq | >Zm00001d016458_T002 ATGGCAGACGATGCCAACCGAGCGGCCTTCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGGT TGCTCCCTTGGTCCCGTTCTCTGACCGGTTTCATAGGTTCCGGTCGTGCCTCATCTTAGGGCTTTTTAGTTGTCGGGTCT TGTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTTACTTTGGAGGAACTTCGCCAGTTGCCA GATGATACCAACACCTACAAGACTGTCGGAAAAGTGTTTATTCTGGAGCCGAAGTCAGTTCTGTTCAATGAGCAGGAGCA AAAGCTTAATGACAGTGAGAGTGCGATAGCTTCAATGCAGACATCCAAAGACTACCTTGAGAAACAGCAGGGCGAAGTGG AGAACAATATTAGGGAGCTGCTTCAACAGGACCCAGGACTTGCGCGTCAGATCCTCTCAATGACCGTTCAATGA |
Microexon DNA seq | GAAAAGT |
Microexon Amino Acid seq | GKV |
Microexon-tag DNA Seq | TTGGAGGAACTTCGCCAGTTGCCAGATGATACCAACACCTACAAGACTGTCGGAAAAGTGTTTATTCTGGAGCCGAAGTCAGTTCTGTTCAATGAGCAGGAGCAAAAG |
Microexon-tag Amino Acid seq | MEELRQLPDDTNTYKTVGKVFILEPKSVLFNEQEQK |
Transcript ID | Zm.24307.1 |
Gene ID | Zm.24307 |
Gene Name | NA |
Pfam domain motif | Prefoldin_2 |
Motif E-value | 5e-18 |
Motif start | 12 |
Motif end | 115 |
Protein seq | >Zm.24307.1 MADDANRAAFMELQSRMIDTTAKIKQLQTQMRSKEGEKKRAYLTLEELRQLPDDTNTYKTVGKVFILEPKSVLFNEQEQK LNDSESAIASMQTSKDYLEKQQGEVENNIRELLQQDPGLARQILSMTVQ* |
CDS seq | >Zm.24307.1 ATGGCAGACGATGCCAACCGAGCGGCCTTCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGTT ACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTTACTTTGGAGGAACTTCGCCAGTTGCCAGATG ATACCAACACCTACAAGACTGTCGGAAAAGTGTTTATTCTGGAGCCGAAGTCAGTTCTGTTCAATGAGCAGGAGCAAAAG CTTAATGACAGTGAGAGTGCGATAGCTTCAATGCAGACATCCAAAGACTACCTTGAGAAACAGCAGGGCGAAGTGGAGAA CAATATTAGGGAGCTGCTTCAACAGGACCCAGGACTTGCGCGTCAGATCCTCTCAATGACCGTTCAATGA |