
Microexon ID | Vv_11:14321630-14321636:+ |
Species | Vistis vinifera | Coordinates | 11:14321630..14321636 |
Microexon Cluster ID | MEP14 |
Size | 7 |
Phase | 1 |
Pfam Domain Motif | Prefoldin_2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,7,49 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTGGAGGARCTGMRVCARYTRYCTGATGAYACAAAYACWTACAARTCYATWGGRARAAYGTTTRTTTTRGAGCCMAARTCAGTTYTRRTGRATGARCARGARMARAAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGAGAAC |
Microexon Amino Acid seq | GRT |
Microexon-tag DNA Seq | TTGGAAGAACTGCGCCAATTGTCTGATGATACAAACACATACAAGTCTATAGGGAGAACGTTTGTCTTAGAGCCAAAATCGGCCTTAATGAGTGAACAGGAACAGAAG |
Microexon-tag Amino Acid Seq | MEELRQLSDDTNTYKSIGRTFVLEPKSALMSEQEQK |
Microexon-tag spanning region | 14321327-14321822 |
Microexon-tag prediction score | 0.9738 |
Overlapped with the annotated transcript (%) | 97.3 |
New Transcript ID | VIT_11s0065g00480.t01x |
Reference Transcript ID | VIT_11s0065g00480.t01 |
Gene ID | VIT_11s0065g00480 |
Gene Name | NA |
Transcript ID | VIT_11s0065g00480.t01 |
Protein ID | VIT_11s0065g00480.t01 |
Gene ID | VIT_11s0065g00480 |
Gene Name | NA |
Pfam domain motif | Prefoldin_2 |
Motif E-value | 4.9e-18 |
Motif start | 12 |
Motif end | 116 |
Protein seq | >VIT_11s0065g00480.t01 MADEANRTAFMEIQGHMIETTGKLKQVQNQMRNKEGEKKRAFLTLEELRQLSDDTNTYKSIGRTRFVLEPKSALMSEQEQ KLKDSEAAIAGLQTSKEYLEKQMAEVENNLRELLQQDPGLARQIMSMTVM* |
CDS seq | >VIT_11s0065g00480.t01 ATGGCCGATGAAGCTAACAGAACTGCATTTATGGAGATTCAAGGTCACATGATCGAAACTACTGGAAAATTGAAGCAGGT GCAGAACCAGATGCGGAACAAAGAAGGAGAAAAGAAGCGTGCTTTCTTAACCTTGGAAGAACTGCGCCAATTGTCTGATG ATACAAACACATACAAGTCTATAGGGAGAACCAGGTTTGTCTTAGAGCCAAAATCGGCCTTAATGAGTGAACAGGAACAG AAGCTCAAGGATAGTGAAGCTGCAATTGCTGGTTTACAGACTTCCAAGGAATACTTAGAGAAGCAGATGGCAGAGGTAGA GAACAACCTGAGGGAGCTGCTGCAGCAAGATCCAGGTCTTGCTCGTCAAATCATGTCGATGACTGTAATGTAA |
Microexon DNA seq | GGAGAAC |
Microexon Amino Acid seq | GRT |
Microexon-tag DNA Seq | TTGGAAGAACTGCGCCAATTGTCTGATGATACAAACACATACAAGTCTATAGGGAGAACGTTTGTCTTAGAGCCAAAATCGGCCTTAATGAGTGAACAGGAACAGAAG |
Microexon-tag Amino Acid seq | MEELRQLSDDTNTYKSIGRTFVLEPKSALMSEQEQK |
Transcript ID | Vv.4197.1 |
Gene ID | Vv.4197 |
Gene Name | NA |
Pfam domain motif | Prefoldin_2 |
Motif E-value | 1.1e-20 |
Motif start | 12 |
Motif end | 115 |
Protein seq | >Vv.4197.1 MADEANRTAFMEIQGHMIETTGKLKQVQNQMRNKEGEKKRAFLTLEELRQLSDDTNTYKSIGRTFVLEPKSALMSEQEQK LKDSEAAIAGLQTSKEYLEKQMAEVENNLRELLQQDPGLARQIMSMTVM* |
CDS seq | >Vv.4197.1 ATGGCCGATGAAGCTAACAGAACTGCATTTATGGAGATTCAAGGTCACATGATCGAAACTACTGGAAAATTGAAGCAGGT GCAGAACCAGATGCGGAACAAAGAAGGAGAAAAGAAGCGTGCTTTCTTAACCTTGGAAGAACTGCGCCAATTGTCTGATG ATACAAACACATACAAGTCTATAGGGAGAACGTTTGTCTTAGAGCCAAAATCGGCCTTAATGAGTGAACAGGAACAGAAG CTCAAGGATAGTGAAGCTGCAATTGCTGGTTTACAGACTTCCAAGGAATACTTAGAGAAGCAGATGGCAGAGGTAGAGAA CAACCTGAGGGAGCTGCTGCAGCAAGATCCAGGTCTTGCTCGTCAAATCATGTCGATGACTGTAATGTAA |