
Microexon ID | Ta_2D:296372302-296372308:+ |
Species | Triticum Aestivum | Coordinates | 2D:296372302..296372308 |
Microexon Cluster ID | MEP14 |
Size | 7 |
Phase | 1 |
Pfam Domain Motif | Prefoldin_2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,7,49 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTGGAGGARCTGMRVCARYTRYCTGATGAYACAAAYACWTACAARTCYATWGGRARAAYGTTTRTTTTRGAGCCMAARTCAGTTYTRRTGRATGARCARGARMARAAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTAAAGT |
Microexon Amino Acid seq | GKV |
Microexon-tag DNA Seq | CTGGAGGAACTTATCCAATTACCTGATGATACGAACACTTACAAGGCCATTGGTAAAGTGTTTATTTTGGAGCCGAGATCACTTATGGTAAATGAGCAAGAGAAAAAG |
Microexon-tag Amino Acid Seq | MEELIQLPDDTNTYKAIGKVFILEPRSLMVNEQEKK |
Microexon-tag spanning region | 296363122-296372464 |
Microexon-tag prediction score | 0.9458 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2D02G249600.1x |
Reference Transcript ID | TraesCS2D02G249600.1 |
Gene ID | TraesCS2D02G249600 |
Gene Name | NA |
Transcript ID | TraesCS2D02G249600.1 |
Protein ID | |
Gene ID | TraesCS2D02G249600 |
Gene Name | |
Pfam domain motif | Prefoldin_2 |
Motif E-value | 4.90E-18 |
Motif start | 12 |
Motif end | 115 |
Protein seq | >TraesCS2D02G249600.1 MADEPNRAAFVELQSRMIETTGKIKQLQTQMRSKESEKKRAYLTLEELIQLPDDTNTYKAIGKVFILEPRSLMVNEQEKK LNDSETAISSMQTSKEYLEKQLGEVENNVRELLQQDPGLARQILSMTVQ* |
CDS seq | >TraesCS2D02G249600.1 ATGGCGGACGAACCCAACCGAGCGGCTTTCGTAGAGCTGCAGAGCCGGATGATCGAGACCACCGGGAAGATCAAACAGCT ACAAACTCAGATGCGTTCTAAAGAGAGTGAAAAGAAGCGTGCATATCTTACACTGGAGGAACTTATCCAATTACCTGATG ATACGAACACTTACAAGGCCATTGGTAAAGTGTTTATTTTGGAGCCGAGATCACTTATGGTAAATGAGCAAGAGAAAAAG CTAAATGATAGTGAGACTGCAATATCGTCGATGCAGACTTCCAAGGAATATCTTGAGAAACAGTTGGGAGAAGTGGAGAA CAACGTTAGAGAGCTACTTCAGCAGGACCCTGGGCTTGCACGCCAGATTCTCTCAATGACTGTTCAGTGA |
Ta_2D:296372302-296372308:+ does not have available information here.