Microexon ID Sl_7:56213952-56213958:+
Species Solanum   Lycopersicum
Coordinates 7:56213952..56213958
Microexon Cluster ID MEP14
Size 7
Phase 1
Pfam Domain Motif Prefoldin_2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 52,7,49
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTGGAGGARCTGMRVCARYTRYCTGATGAYACAAAYACWTACAARTCYATWGGRARAAYGTTTRTTTTRGAGCCMAARTCAGTTYTRRTGRATGARCARGARMARAAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAAGAAC
Microexon Amino Acid seq GRT
Microexon-tag DNA Seq TTGGAGGAACTGAAACAGCTGTCTGATGACACTAATACATACAAAGCCATAGGAAGAACATTTGTCTTAGAGCCAAAGGCTGTGTTAATGAACGAGCAAGAGCAAAAA
Microexon-tag Amino Acid Seq MEELKQLSDDTNTYKAIGRTFVLEPKAVLMNEQEQK
Microexon-tag spanning region56211501-56214150
Microexon-tag prediction score0.9649
Overlapped with the annotated transcript (%) 100
New Transcript ID Solyc07g042620.3.1x
Reference Transcript ID Solyc07g042620.3.1
Gene ID Solyc07g042620.3
Gene Name NA
Transcript ID Solyc07g042620.3.1
Protein ID
Gene ID Solyc07g042620.3
Gene Name
Pfam domain motif Prefoldin_2
Motif E-value 7.60E-20
Motif start 13
Motif end 115
Protein seq >Solyc07g042620.3.1
MADEANRTAFIEIQGRMIETTGKLKQVQTQIRNKETEKKRAYLTLEELKQLSDDTNTYKAIGRTFVLEPKAVLMNEQEQK
LKDGETAIASLQTSKEYLEKHMAEVENNLRELLQQDPGLARQIMTMSVA*
CDS seq >Solyc07g042620.3.1
ATGGCGGACGAAGCAAATAGAACTGCTTTTATTGAAATTCAGGGTCGAATGATAGAGACTACCGGTAAATTGAAGCAGGT
TCAAACCCAGATTCGAAACAAAGAAACCGAGAAGAAGCGTGCTTATTTGACATTGGAGGAACTGAAACAGCTGTCTGATG
ACACTAATACATACAAAGCCATAGGAAGAACATTTGTCTTAGAGCCAAAGGCTGTGTTAATGAACGAGCAAGAGCAAAAA
CTCAAGGATGGTGAAACTGCAATTGCCTCTTTGCAGACTTCTAAAGAGTATTTGGAAAAGCACATGGCGGAGGTGGAGAA
TAACCTTAGGGAGCTCTTGCAACAAGATCCTGGTCTTGCTCGTCAGATAATGACCATGTCTGTAGCGTAG
Sl_7:56213952-56213958:+ does not have available information here.