
Microexon ID | Sb_4:39531694-39531700:+ |
Species | Sorghum Bicolor | Coordinates | 4:39531694..39531700 |
Microexon Cluster ID | MEP14 |
Size | 7 |
Phase | 1 |
Pfam Domain Motif | Prefoldin_2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,7,49 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTGGAGGARCTGMRVCARYTRYCTGATGAYACAAAYACWTACAARTCYATWGGRARAAYGTTTRTTTTRGAGCCMAARTCAGTTYTRRTGRATGARCARGARMARAAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAAAGT |
Microexon Amino Acid seq | GKV |
Microexon-tag DNA Seq | TTGGAGGAACTTCGCCAGTTGCCAGATGATACCAACACCTACAAGACTGTCGGAAAAGTGTTTATTCTGGAGCCAAAATCAGTTCTGTTTAATGAGCAGGAGCAAAAG |
Microexon-tag Amino Acid Seq | MEELRQLPDDTNTYKTVGKVFILEPKSVLFNEQEQK |
Microexon-tag spanning region | 39530486-39531868 |
Microexon-tag prediction score | 0.9631 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EES05005x |
Reference Transcript ID | EES05005 |
Gene ID | SORBI_3004G138800 |
Gene Name | NA |
Transcript ID | EES05005 |
Protein ID | |
Gene ID | SORBI_3004G138800 |
Gene Name | |
Pfam domain motif | Prefoldin_2 |
Motif E-value | 5.20E-18 |
Motif start | 12 |
Motif end | 115 |
Protein seq | >EES05005 MADEANRAAFMELQSRMIDTTAKIKQLQTQMRSKEGEKKRAYLTLEELRQLPDDTNTYKTVGKVFILEPKSVLFNEQEQK LHDSESAIASMQTSKEYLEKQQGEVENNIRELLQQDPGLARQILSMTVQ* |
CDS seq | >EES05005 ATGGCAGACGAAGCCAACCGAGCGGCCTTCATGGAGCTGCAGTCCCGGATGATCGATACCACCGCGAAGATCAAGCAGTT ACAAACCCAAATGCGTTCTAAGGAAGGAGAAAAGAAGCGTGCCTACCTTACTTTGGAGGAACTTCGCCAGTTGCCAGATG ATACCAACACCTACAAGACTGTCGGAAAAGTGTTTATTCTGGAGCCAAAATCAGTTCTGTTTAATGAGCAGGAGCAAAAG CTTCATGACAGTGAGAGTGCTATAGCTTCAATGCAGACATCCAAAGAATACCTTGAGAAACAGCAGGGCGAAGTGGAGAA CAACATTAGGGAGCTGCTTCAACAGGATCCAGGGCTTGCGCGTCAGATCCTCTCAATGACCGTTCAATGA |
Sb_4:39531694-39531700:+ does not have available information here.