Microexon ID Sb_4:39531694-39531700:+
Species Sorghum   Bicolor
Coordinates 4:39531694..39531700
Microexon Cluster ID MEP14
Size 7
Phase 1
Pfam Domain Motif Prefoldin_2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 52,7,49
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTGGAGGARCTGMRVCARYTRYCTGATGAYACAAAYACWTACAARTCYATWGGRARAAYGTTTRTTTTRGAGCCMAARTCAGTTYTRRTGRATGARCARGARMARAAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAAAAGT
Microexon Amino Acid seq GKV
Microexon-tag DNA Seq TTGGAGGAACTTCGCCAGTTGCCAGATGATACCAACACCTACAAGACTGTCGGAAAAGTGTTTATTCTGGAGCCAAAATCAGTTCTGTTTAATGAGCAGGAGCAAAAG
Microexon-tag Amino Acid Seq MEELRQLPDDTNTYKTVGKVFILEPKSVLFNEQEQK
Microexon-tag spanning region39530486-39531868
Microexon-tag prediction score0.9631
Overlapped with the annotated transcript (%) 100
New Transcript ID EES05005x
Reference Transcript ID EES05005
Gene ID SORBI_3004G138800
Gene Name NA
Transcript ID EES05005
Protein ID
Gene ID SORBI_3004G138800
Gene Name
Pfam domain motif Prefoldin_2
Motif E-value 5.20E-18
Motif start 12
Motif end 115
Protein seq >EES05005
MADEANRAAFMELQSRMIDTTAKIKQLQTQMRSKEGEKKRAYLTLEELRQLPDDTNTYKTVGKVFILEPKSVLFNEQEQK
LHDSESAIASMQTSKEYLEKQQGEVENNIRELLQQDPGLARQILSMTVQ*
CDS seq >EES05005
ATGGCAGACGAAGCCAACCGAGCGGCCTTCATGGAGCTGCAGTCCCGGATGATCGATACCACCGCGAAGATCAAGCAGTT
ACAAACCCAAATGCGTTCTAAGGAAGGAGAAAAGAAGCGTGCCTACCTTACTTTGGAGGAACTTCGCCAGTTGCCAGATG
ATACCAACACCTACAAGACTGTCGGAAAAGTGTTTATTCTGGAGCCAAAATCAGTTCTGTTTAATGAGCAGGAGCAAAAG
CTTCATGACAGTGAGAGTGCTATAGCTTCAATGCAGACATCCAAAGAATACCTTGAGAAACAGCAGGGCGAAGTGGAGAA
CAACATTAGGGAGCTGCTTCAACAGGATCCAGGGCTTGCGCGTCAGATCCTCTCAATGACCGTTCAATGA
Sb_4:39531694-39531700:+ does not have available information here.