
Microexon ID | Ps_NC_039364.1:198539629-198539635:+ |
Species | Papaver somniferum | Coordinates | NC_039364.1:198539629..198539635 |
Microexon Cluster ID | MEP14 |
Size | 7 |
Phase | 1 |
Pfam Domain Motif | Prefoldin_2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,7,49 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTGGAGGARCTGMRVCARYTRYCTGATGAYACAAAYACWTACAARTCYATWGGRARAAYGTTTRTTTTRGAGCCMAARTCAGTTYTRRTGRATGARCARGARMARAAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGAGAAC |
Microexon Amino Acid seq | GRT |
Microexon-tag DNA Seq | TTGGAGGAGCTTCGGCAAATGTCTGATGATACAAATACATACAAATCAATTGGGAGAACGTTCATTTTGGAGCCCAAACCTGTATTGGTGGCTGAGCAGGAAAAGAAG |
Microexon-tag Amino Acid Seq | MEELRQMSDDTNTYKSIGRTFILEPKPVLVAEQEKK |
Microexon-tag spanning region | 198539294-198539792 |
Microexon-tag prediction score | 0.9636 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026548377.1x |
Reference Transcript ID | XM_026548377.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026548377.1 |
Protein ID | XP_026404162.1 |
Gene ID | LOC113299355 |
Gene Name | NA |
Pfam domain motif | Prefoldin_2 |
Motif E-value | 1.6e-19 |
Motif start | 12 |
Motif end | 115 |
Protein seq | >XP_026404162.1 MADEASRTAFMEIQGRMIEATGKLKQVQAQMRNKEGEKKRAFLTLEELRQMSDDTNTYKSIGRTFILEPKPVLVAEQEKK FTDSESAIASLQTSKEYLEKQMVEIENNLKELLQQDPGLARQIMSLSV* |
CDS seq | >XM_026548377.1 ATGGCGGATGAAGCTAGCAGAACGGCATTTATGGAGATCCAAGGTCGTATGATTGAGGCCACGGGAAAGTTGAAACAGGT GCAAGCTCAAATGCGTAACAAAGAGGGAGAAAAGAAACGTGCTTTCTTGACATTGGAGGAGCTTCGGCAAATGTCTGATG ATACAAATACATACAAATCAATTGGGAGAACGTTCATTTTGGAGCCCAAACCTGTATTGGTGGCTGAGCAGGAAAAGAAG TTCACAGACAGTGAATCCGCCATTGCGTCATTGCAGACATCCAAGGAGTACTTAGAGAAGCAGATGGTAGAAATTGAGAA CAATTTGAAAGAGCTCTTACAGCAAGACCCAGGCCTCGCTCGCCAGATAATGTCCCTGAGTGTGTGA |
Microexon DNA seq | GGAGAAC |
Microexon Amino Acid seq | GRT |
Microexon-tag DNA Seq | TTGGAGGAGCTTCGGCAAATGTCTGATGATACAAATACATACAAATCAATTGGGAGAACGTTCATTTTGGAGCCCAAACCTGTATTGGTGGCTGAGCAGGAAAAGAAG |
Microexon-tag Amino Acid seq | MEELRQMSDDTNTYKSIGRTFILEPKPVLVAEQEKK |
Transcript ID | XM_026548377.1 |
Gene ID | Ps.45399 |
Gene Name | NA |
Pfam domain motif | Prefoldin_2 |
Motif E-value | 1.6e-19 |
Motif start | 12 |
Motif end | 115 |
Protein seq | >XM_026548377.1 MADEASRTAFMEIQGRMIEATGKLKQVQAQMRNKEGEKKRAFLTLEELRQMSDDTNTYKSIGRTFILEPKPVLVAEQEKK FTDSESAIASLQTSKEYLEKQMVEIENNLKELLQQDPGLARQIMSLSV* |
CDS seq | >XM_026548377.1 ATGGCGGATGAAGCTAGCAGAACGGCATTTATGGAGATCCAAGGTCGTATGATTGAGGCCACGGGAAAGTTGAAACAGGT GCAAGCTCAAATGCGTAACAAAGAGGGAGAAAAGAAACGTGCTTTCTTGACATTGGAGGAGCTTCGGCAAATGTCTGATG ATACAAATACATACAAATCAATTGGGAGAACGTTCATTTTGGAGCCCAAACCTGTATTGGTGGCTGAGCAGGAAAAGAAG TTCACAGACAGTGAATCCGCCATTGCGTCATTGCAGACATCCAAGGAGTACTTAGAGAAGCAGATGGTAGAAATTGAGAA CAATTTGAAAGAGCTCTTACAGCAAGACCCAGGCCTCGCTCGCCAGATAATGTCCCTGAGTGTGTGA |