Microexon ID Pp_19:2370582-2370588:+
Species Physcomitrium patens
Coordinates 19:2370582..2370588
Microexon Cluster ID MEP14
Size 7
Phase 1
Pfam Domain Motif Prefoldin_2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 52,7,49
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTGGAGGARCTGMRVCARYTRYCTGATGAYACAAAYACWTACAARTCYATWGGRARAAYGTTTRTTTTRGAGCCMAARTCAGTTYTRRTGRATGARCARGARMARAAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAAAAGC
Microexon Amino Acid seq GKA
Microexon-tag DNA Seq CTGGAAGAGTTGGGGAGCCTGCCCGAAGGAACTAACACGTACCGAACTCTTGGAAAAGCGTTTGTGCTGGAGCCAAAAGATGAGCTTATTAAAGAGCAGCAGACTAAA
Microexon-tag Amino Acid Seq MEELGSLPEGTNTYRTLGKAFVLEPKDELIKEQQTK
Microexon-tag spanning region2370176-2371034
Microexon-tag prediction score0.8541
Overlapped with the annotated transcript (%) 100
New Transcript ID Pp3c19_4350V3.1x
Reference Transcript ID Pp3c19_4350V3.1
Gene ID Pp3c19_4350
Gene Name NA
Transcript ID Pp3c19_4350V3.1
Protein ID Pp3c19_4350V3.1
Gene ID Pp3c19_4350
Gene Name NA
Pfam domain motif Prefoldin_2
Motif E-value 1.8e-19
Motif start 36
Motif end 138
Protein seq >Pp3c19_4350V3.1
MSRIPSFNSKLSGVILSFAFSFVMAAEINKEAFVELQGRLVETTSKLKHVQAQIRSKEAEKKRAFLTLEELGSLPEGTNT
YRTLGKAFVLEPKDELIKEQQTKAEESDSAIATLVGSKEYLERQMKEVESNFRELLQNSPELARQVMAMSVS*
CDS seq >Pp3c19_4350V3.1
ATGTCAAGAATTCCTAGTTTCAATTCCAAGCTCTCTGGCGTGATCCTCAGTTTTGCATTCAGCTTCGTCATGGCCGCCGA
GATCAACAAGGAGGCTTTTGTGGAGCTTCAAGGAAGGCTGGTGGAGACTACCTCGAAACTAAAACATGTCCAAGCACAAA
TTCGGAGCAAGGAGGCTGAGAAGAAGCGCGCGTTTCTGACACTGGAAGAGTTGGGGAGCCTGCCCGAAGGAACTAACACG
TACCGAACTCTTGGAAAAGCGTTTGTGCTGGAGCCAAAAGATGAGCTTATTAAAGAGCAGCAGACTAAAGCTGAGGAGAG
TGACAGTGCGATTGCCACACTAGTGGGTTCGAAGGAGTACTTGGAGAGACAAATGAAGGAAGTTGAGAGCAACTTCAGAG
AGTTGTTACAAAACTCTCCCGAACTTGCACGTCAAGTGATGGCAATGTCTGTGTCATGA
Microexon DNA seq GAAAAGC
Microexon Amino Acid seq GKA
Microexon-tag DNA Seq CTGGAAGAGTTGGGGAGCCTGCCCGAAGGAACTAACACGTACCGAACTCTTGGAAAAGCGTTTGTGCTGGAGCCAAAAGATGAGCTTATTAAAGAGCAGCAGACTAAA
Microexon-tag Amino Acid seq MEELGSLPEGTNTYRTLGKAFVLEPKDELIKEQQTK
Transcript ID Pp3c19_4350V3.1
Gene ID Pp.10102
Gene Name NA
Pfam domain motif Prefoldin_2
Motif E-value 1.9e-19
Motif start 36
Motif end 138
Protein seq >Pp3c19_4350V3.1
MSRIPSFNSKLSGVILSFAFSFVMAAEINKEAFVELQGRLVETTSKLKHVQAQIRSKEAEKKRAFLTLEELGSLPEGTNT
YRTLGKAFVLEPKDELIKEQQTKAEESDSAIATLVGSKEYLERQMKEVESNFRELLQNSPELARQVMAMSVS*
CDS seq >Pp3c19_4350V3.1
ATGTCAAGAATTCCTAGTTTCAATTCCAAGCTCTCTGGCGTGATCCTCAGTTTTGCATTCAGCTTCGTCATGGCCGCCGA
GATCAACAAGGAGGCTTTTGTGGAGCTTCAAGGAAGGCTGGTGGAGACTACCTCGAAACTAAAACATGTCCAAGCACAAA
TTCGGAGCAAGGAGGCTGAGAAGAAGCGCGCGTTTCTGACACTGGAAGAGTTGGGGAGCCTGCCCGAAGGAACTAACACG
TACCGAACTCTTGGAAAAGCGTTTGTGCTGGAGCCAAAAGATGAGCTTATTAAAGAGCAGCAGACTAAAGCTGAGGAGAG
TGACAGTGCGATTGCCACACTAGTGGGTTCGAAGGAGTACTTGGAGAGACAAATGAAGGAAGTTGAGAGCAACTTCAGAG
AGTTGTTACAAAACTCTCCCGAACTTGCACGTCAAGTGATGGCAATGTCTGTGTCATGA