
Microexon ID | Os_2:15527228-15527234:+ |
Species | Oryza sativa | Coordinates | 2:15527228..15527234 |
Microexon Cluster ID | MEP14 |
Size | 7 |
Phase | 1 |
Pfam Domain Motif | Prefoldin_2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,7,49 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTGGAGGARCTGMRVCARYTRYCTGATGAYACAAAYACWTACAARTCYATWGGRARAAYGTTTRTTTTRGAGCCMAARTCAGTTYTRRTGRATGARCARGARMARAAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTAAAGT |
Microexon Amino Acid seq | GKV |
Microexon-tag DNA Seq | CTGGAGGAACTTCGCCAATTGCCAGATAATACAAACACTTACAAGACTGTTGGTAAAGTATTTATTTTGGAGCCAAAATCACTCCTGCTGAATGAGCAAGAACAAAAG |
Microexon-tag Amino Acid Seq | MEELRQLPDNTNTYKTVGKVFILEPKSLLLNEQEQK |
Microexon-tag spanning region | 15526329-15527400 |
Microexon-tag prediction score | 0.9547 |
Overlapped with the annotated transcript (%) | 88.6 |
New Transcript ID | Os02t0462900-01x |
Reference Transcript ID | Os02t0462900-01 |
Gene ID | Os02g0462900 |
Gene Name | NA |
Os_2:15527228-15527234:+ does not have available information here.
Microexon DNA seq | GTAAAGT |
Microexon Amino Acid seq | GKV |
Microexon-tag DNA Seq | CTGGAGGAACTTCGCCAATTGCCAGATAATACAAACACTTACAAGACTGTTGGTAAAGTATTTATTTTGGAGCCAAAATCACTCCTGCTGAATGAGCAAGAACAAAAG |
Microexon-tag Amino Acid seq | MEELRQLPDNTNTYKTVGKVFILEPKSLLLNEQEQK |
Transcript ID | Os.14016.1 |
Gene ID | Os.14016 |
Gene Name | NA |
Pfam domain motif | Prefoldin_2 |
Motif E-value | 1.2e-18 |
Motif start | 12 |
Motif end | 115 |
Protein seq | >Os.14016.1 MADEANRAAFVELQGRMIDTTGKIKQLQTQMRSKEGEKKRAYLTLEELRQLPDNTNTYKTVGKVFILEPKSLLLNEQEQK LNDSESAIASMQTSKEYLEKQLAEVENNIRELLQQDPGLARQILSMTVQ* |
CDS seq | >Os.14016.1 ATGGCGGACGAAGCCAACCGAGCGGCTTTCGTGGAGCTGCAGGGTCGGATGATCGACACCACCGGGAAGATCAAGCAGTT GCAAACTCAGATGCGCTCTAAAGAGGGTGAAAAGAAGCGTGCTTACCTCACACTGGAGGAACTTCGCCAATTGCCAGATA ATACAAACACTTACAAGACTGTTGGTAAAGTATTTATTTTGGAGCCAAAATCACTCCTGCTGAATGAGCAAGAACAAAAG CTTAATGACAGTGAAAGTGCAATAGCATCGATGCAGACTTCCAAGGAATATCTTGAGAAGCAGTTGGCAGAAGTGGAGAA CAACATAAGAGAGCTACTTCAGCAGGACCCTGGGCTGGCACGCCAGATCCTATCAATGACAGTTCAGTGA |