Microexon ID Os_2:15527228-15527234:+
Species Oryza sativa
Coordinates 2:15527228..15527234
Microexon Cluster ID MEP14
Size 7
Phase 1
Pfam Domain Motif Prefoldin_2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 52,7,49
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTGGAGGARCTGMRVCARYTRYCTGATGAYACAAAYACWTACAARTCYATWGGRARAAYGTTTRTTTTRGAGCCMAARTCAGTTYTRRTGRATGARCARGARMARAAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTAAAGT
Microexon Amino Acid seq GKV
Microexon-tag DNA Seq CTGGAGGAACTTCGCCAATTGCCAGATAATACAAACACTTACAAGACTGTTGGTAAAGTATTTATTTTGGAGCCAAAATCACTCCTGCTGAATGAGCAAGAACAAAAG
Microexon-tag Amino Acid Seq MEELRQLPDNTNTYKTVGKVFILEPKSLLLNEQEQK
Microexon-tag spanning region15526329-15527400
Microexon-tag prediction score0.9547
Overlapped with the annotated transcript (%) 88.6
New Transcript ID Os02t0462900-01x
Reference Transcript ID Os02t0462900-01
Gene ID Os02g0462900
Gene Name NA
Os_2:15527228-15527234:+ does not have available information here.
Microexon DNA seq GTAAAGT
Microexon Amino Acid seq GKV
Microexon-tag DNA Seq CTGGAGGAACTTCGCCAATTGCCAGATAATACAAACACTTACAAGACTGTTGGTAAAGTATTTATTTTGGAGCCAAAATCACTCCTGCTGAATGAGCAAGAACAAAAG
Microexon-tag Amino Acid seq MEELRQLPDNTNTYKTVGKVFILEPKSLLLNEQEQK
Transcript ID Os.14016.1
Gene ID Os.14016
Gene Name NA
Pfam domain motif Prefoldin_2
Motif E-value 1.2e-18
Motif start 12
Motif end 115
Protein seq >Os.14016.1
MADEANRAAFVELQGRMIDTTGKIKQLQTQMRSKEGEKKRAYLTLEELRQLPDNTNTYKTVGKVFILEPKSLLLNEQEQK
LNDSESAIASMQTSKEYLEKQLAEVENNIRELLQQDPGLARQILSMTVQ*
CDS seq >Os.14016.1
ATGGCGGACGAAGCCAACCGAGCGGCTTTCGTGGAGCTGCAGGGTCGGATGATCGACACCACCGGGAAGATCAAGCAGTT
GCAAACTCAGATGCGCTCTAAAGAGGGTGAAAAGAAGCGTGCTTACCTCACACTGGAGGAACTTCGCCAATTGCCAGATA
ATACAAACACTTACAAGACTGTTGGTAAAGTATTTATTTTGGAGCCAAAATCACTCCTGCTGAATGAGCAAGAACAAAAG
CTTAATGACAGTGAAAGTGCAATAGCATCGATGCAGACTTCCAAGGAATATCTTGAGAAGCAGTTGGCAGAAGTGGAGAA
CAACATAAGAGAGCTACTTCAGCAGGACCCTGGGCTGGCACGCCAGATCCTATCAATGACAGTTCAGTGA