
Microexon ID | Ha_12:14142501-14142507:- |
Species | Helianthus annuus | Coordinates | 12:14142501..14142507 |
Microexon Cluster ID | MEP14 |
Size | 7 |
Phase | 1 |
Pfam Domain Motif | Prefoldin_2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,7,49 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTGGAGGARCTGMRVCARYTRYCTGATGAYACAAAYACWTACAARTCYATWGGRARAAYGTTTRTTTTRGAGCCMAARTCAGTTYTRRTGRATGARCARGARMARAAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGAGAAC |
Microexon Amino Acid seq | GRT |
Microexon-tag DNA Seq | TTGGAGGAACTGCGCCAATTATCTGATGACACAAACACATACAAATCTATAGGGAGAACATTCATCTTAGAGCCAAAACCATTTCTAATGAATGAACAAGAAAAGAAG |
Microexon-tag Amino Acid Seq | MEELRQLSDDTNTYKSIGRTFILEPKPFLMNEQEKK |
Microexon-tag spanning region | 14141418-14142688 |
Microexon-tag prediction score | 0.9705 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG04099x |
Reference Transcript ID | OTG04099 |
Gene ID | HannXRQ_Chr12g0358571 |
Gene Name | PFD1 |
Transcript ID | OTG04099 |
Protein ID | OTG04099 |
Gene ID | HannXRQ_Chr12g0358571 |
Gene Name | PFD1 |
Pfam domain motif | Prefoldin_2 |
Motif E-value | 7.9e-20 |
Motif start | 13 |
Motif end | 115 |
Protein seq | >OTG04099 MADEANKTAFVEIQGRMIETTAKLKQVQNQMRNKESEKKRAYLTLEELRQLSDDTNTYKSIGRTFILEPKPFLMNEQEKK LSDSETAIASLQTSKEYLEKQLAEVETNLRELLQQDPSLARQIMSMAVV* |
CDS seq | >OTG04099 ATGGCCGACGAAGCAAACAAAACAGCGTTTGTGGAGATTCAAGGTCGCATGATTGAAACAACTGCTAAATTGAAACAAGT TCAAAACCAGATGCGAAACAAAGAAAGTGAAAAGAAACGTGCTTATTTAACCTTGGAGGAACTGCGCCAATTATCTGATG ACACAAACACATACAAATCTATAGGGAGAACATTCATCTTAGAGCCAAAACCATTTCTAATGAATGAACAAGAAAAGAAG CTTAGTGATAGTGAAACTGCAATTGCCTCCTTACAGACTTCAAAGGAGTACCTTGAGAAACAATTGGCGGAGGTGGAGAC TAACTTGAGGGAGCTTTTGCAACAAGATCCCAGTCTTGCTCGTCAAATAATGTCAATGGCTGTCGTGTAA |
Microexon DNA seq | GGAGAAC |
Microexon Amino Acid seq | GRT |
Microexon-tag DNA Seq | TTGGAGGAACTGCGCCAATTATCTGATGACACAAACACATACAAATCTATAGGGAGAACATTCATCTTAGAGCCAAAACCATTTCTAATGAATGAACAAGAAAAGAAG |
Microexon-tag Amino Acid seq | MEELRQLSDDTNTYKSIGRTFILEPKPFLMNEQEKK |
Transcript ID | OTG04099 |
Gene ID | Ha.11405 |
Gene Name | PFD1 |
Pfam domain motif | Prefoldin_2 |
Motif E-value | 7.9e-20 |
Motif start | 13 |
Motif end | 115 |
Protein seq | >OTG04099 MADEANKTAFVEIQGRMIETTAKLKQVQNQMRNKESEKKRAYLTLEELRQLSDDTNTYKSIGRTFILEPKPFLMNEQEKK LSDSETAIASLQTSKEYLEKQLAEVETNLRELLQQDPSLARQIMSMAVV* |
CDS seq | >OTG04099 ATGGCCGACGAAGCAAACAAAACAGCGTTTGTGGAGATTCAAGGTCGCATGATTGAAACAACTGCTAAATTGAAACAAGT TCAAAACCAGATGCGAAACAAAGAAAGTGAAAAGAAACGTGCTTATTTAACCTTGGAGGAACTGCGCCAATTATCTGATG ACACAAACACATACAAATCTATAGGGAGAACATTCATCTTAGAGCCAAAACCATTTCTAATGAATGAACAAGAAAAGAAG CTTAGTGATAGTGAAACTGCAATTGCCTCCTTACAGACTTCAAAGGAGTACCTTGAGAAACAATTGGCGGAGGTGGAGAC TAACTTGAGGGAGCTTTTGCAACAAGATCCCAGTCTTGCTCGTCAAATAATGTCAATGGCTGTCGTGTAA |