Microexon ID Ha_12:14142501-14142507:-
Species Helianthus annuus
Coordinates 12:14142501..14142507
Microexon Cluster ID MEP14
Size 7
Phase 1
Pfam Domain Motif Prefoldin_2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 52,7,49
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTGGAGGARCTGMRVCARYTRYCTGATGAYACAAAYACWTACAARTCYATWGGRARAAYGTTTRTTTTRGAGCCMAARTCAGTTYTRRTGRATGARCARGARMARAAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGAGAAC
Microexon Amino Acid seq GRT
Microexon-tag DNA Seq TTGGAGGAACTGCGCCAATTATCTGATGACACAAACACATACAAATCTATAGGGAGAACATTCATCTTAGAGCCAAAACCATTTCTAATGAATGAACAAGAAAAGAAG
Microexon-tag Amino Acid Seq MEELRQLSDDTNTYKSIGRTFILEPKPFLMNEQEKK
Microexon-tag spanning region14141418-14142688
Microexon-tag prediction score0.9705
Overlapped with the annotated transcript (%) 100
New Transcript ID OTG04099x
Reference Transcript ID OTG04099
Gene ID HannXRQ_Chr12g0358571
Gene Name PFD1
Transcript ID OTG04099
Protein ID OTG04099
Gene ID HannXRQ_Chr12g0358571
Gene Name PFD1
Pfam domain motif Prefoldin_2
Motif E-value 7.9e-20
Motif start 13
Motif end 115
Protein seq >OTG04099
MADEANKTAFVEIQGRMIETTAKLKQVQNQMRNKESEKKRAYLTLEELRQLSDDTNTYKSIGRTFILEPKPFLMNEQEKK
LSDSETAIASLQTSKEYLEKQLAEVETNLRELLQQDPSLARQIMSMAVV*
CDS seq >OTG04099
ATGGCCGACGAAGCAAACAAAACAGCGTTTGTGGAGATTCAAGGTCGCATGATTGAAACAACTGCTAAATTGAAACAAGT
TCAAAACCAGATGCGAAACAAAGAAAGTGAAAAGAAACGTGCTTATTTAACCTTGGAGGAACTGCGCCAATTATCTGATG
ACACAAACACATACAAATCTATAGGGAGAACATTCATCTTAGAGCCAAAACCATTTCTAATGAATGAACAAGAAAAGAAG
CTTAGTGATAGTGAAACTGCAATTGCCTCCTTACAGACTTCAAAGGAGTACCTTGAGAAACAATTGGCGGAGGTGGAGAC
TAACTTGAGGGAGCTTTTGCAACAAGATCCCAGTCTTGCTCGTCAAATAATGTCAATGGCTGTCGTGTAA
Microexon DNA seq GGAGAAC
Microexon Amino Acid seq GRT
Microexon-tag DNA Seq TTGGAGGAACTGCGCCAATTATCTGATGACACAAACACATACAAATCTATAGGGAGAACATTCATCTTAGAGCCAAAACCATTTCTAATGAATGAACAAGAAAAGAAG
Microexon-tag Amino Acid seq MEELRQLSDDTNTYKSIGRTFILEPKPFLMNEQEKK
Transcript ID OTG04099
Gene ID Ha.11405
Gene Name PFD1
Pfam domain motif Prefoldin_2
Motif E-value 7.9e-20
Motif start 13
Motif end 115
Protein seq >OTG04099
MADEANKTAFVEIQGRMIETTAKLKQVQNQMRNKESEKKRAYLTLEELRQLSDDTNTYKSIGRTFILEPKPFLMNEQEKK
LSDSETAIASLQTSKEYLEKQLAEVETNLRELLQQDPSLARQIMSMAVV*
CDS seq >OTG04099
ATGGCCGACGAAGCAAACAAAACAGCGTTTGTGGAGATTCAAGGTCGCATGATTGAAACAACTGCTAAATTGAAACAAGT
TCAAAACCAGATGCGAAACAAAGAAAGTGAAAAGAAACGTGCTTATTTAACCTTGGAGGAACTGCGCCAATTATCTGATG
ACACAAACACATACAAATCTATAGGGAGAACATTCATCTTAGAGCCAAAACCATTTCTAATGAATGAACAAGAAAAGAAG
CTTAGTGATAGTGAAACTGCAATTGCCTCCTTACAGACTTCAAAGGAGTACCTTGAGAAACAATTGGCGGAGGTGGAGAC
TAACTTGAGGGAGCTTTTGCAACAAGATCCCAGTCTTGCTCGTCAAATAATGTCAATGGCTGTCGTGTAA