Microexon ID Ha_10:209691179-209691185:-
Species Helianthus annuus
Coordinates 10:209691179..209691185
Microexon Cluster ID MEP14
Size 7
Phase 1
Pfam Domain Motif Prefoldin_2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 52,7,49
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTGGAGGARCTGMRVCARYTRYCTGATGAYACAAAYACWTACAARTCYATWGGRARAAYGTTTRTTTTRGAGCCMAARTCAGTTYTRRTGRATGARCARGARMARAAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGAGAAC
Microexon Amino Acid seq GRT
Microexon-tag DNA Seq TTGGAGGAACTACGACAGCTGTCTGATGACACAAACACATACAAATCTATAGGGAGAACATTCGTCTTAGAGCCGAAACCATTTTTAATGAATGAACAAGAAAAGAAG
Microexon-tag Amino Acid Seq MEELRQLSDDTNTYKSIGRTFVLEPKPFLMNEQEKK
Microexon-tag spanning region209690322-209692660
Microexon-tag prediction score0.9714
Overlapped with the annotated transcript (%) 100
New Transcript ID OTG12422x
Reference Transcript ID OTG12422
Gene ID HannXRQ_Chr10g0309491
Gene Name PFD1
Transcript ID OTG12422
Protein ID OTG12422
Gene ID HannXRQ_Chr10g0309491
Gene Name PFD1
Pfam domain motif Prefoldin_2
Motif E-value 5.4e-20
Motif start 13
Motif end 115
Protein seq >OTG12422
MADEANKTAFVEIQSRMIETTAKLKQVQNQMRNKESEKKRAYLTLEELRQLSDDTNTYKSIGRTFVLEPKPFLMNEQEKK
LKDSETAIASLQTSKEYLEKQLTEVEANLRELLQQDPGLAHQIMSMAAV*
CDS seq >OTG12422
ATGGCTGATGAAGCAAACAAAACAGCGTTTGTGGAAATTCAAAGTCGCATGATTGAGACAACTGCAAAATTGAAACAGGT
TCAAAACCAGATGCGAAACAAGGAAAGTGAAAAGAAGCGTGCTTATTTAACCTTGGAGGAACTACGACAGCTGTCTGATG
ACACAAACACATACAAATCTATAGGGAGAACATTCGTCTTAGAGCCGAAACCATTTTTAATGAATGAACAAGAAAAGAAG
CTCAAGGATAGTGAAACTGCCATAGCCTCTTTACAGACTTCAAAGGAGTACCTTGAGAAACAATTGACAGAGGTGGAAGC
TAACTTGAGGGAGCTTCTGCAACAAGATCCGGGTCTTGCTCACCAGATAATGTCCATGGCTGCCGTGTAA
Microexon DNA seq GGAGAAC
Microexon Amino Acid seq GRT
Microexon-tag DNA Seq TTGGAGGAACTACGACAGCTGTCTGATGACACAAACACATACAAATCTATAGGGAGAACATTCGTCTTAGAGCCGAAACCATTTTTAATGAATGAACAAGAAAAGAAG
Microexon-tag Amino Acid seq MEELRQLSDDTNTYKSIGRTFVLEPKPFLMNEQEKK
Transcript ID OTG12422
Gene ID Ha.6440
Gene Name PFD1
Pfam domain motif Prefoldin_2
Motif E-value 5.4e-20
Motif start 13
Motif end 115
Protein seq >OTG12422
MADEANKTAFVEIQSRMIETTAKLKQVQNQMRNKESEKKRAYLTLEELRQLSDDTNTYKSIGRTFVLEPKPFLMNEQEKK
LKDSETAIASLQTSKEYLEKQLTEVEANLRELLQQDPGLAHQIMSMAAV*
CDS seq >OTG12422
ATGGCTGATGAAGCAAACAAAACAGCGTTTGTGGAAATTCAAAGTCGCATGATTGAGACAACTGCAAAATTGAAACAGGT
TCAAAACCAGATGCGAAACAAGGAAAGTGAAAAGAAGCGTGCTTATTTAACCTTGGAGGAACTACGACAGCTGTCTGATG
ACACAAACACATACAAATCTATAGGGAGAACATTCGTCTTAGAGCCGAAACCATTTTTAATGAATGAACAAGAAAAGAAG
CTCAAGGATAGTGAAACTGCCATAGCCTCTTTACAGACTTCAAAGGAGTACCTTGAGAAACAATTGACAGAGGTGGAAGC
TAACTTGAGGGAGCTTCTGCAACAAGATCCGGGTCTTGCTCACCAGATAATGTCCATGGCTGCCGTGTAA