Microexon ID At_2:3046227-3046233:+
Species Arabidopsis thaliana
Coordinates 2:3046227..3046233
Microexon Cluster ID MEP14
Size 7
Phase 1
Pfam Domain Motif Prefoldin_2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 52,7,49
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTGGAGGARCTGMRVCARYTRYCTGATGAYACAAAYACWTACAARTCYATWGGRARAAYGTTTRTTTTRGAGCCMAARTCAGTTYTRRTGRATGARCARGARMARAAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAAGAAC
Microexon Amino Acid seq GRT
Microexon-tag DNA Seq TTGGAGGAGCTGAGGCCATTGCCTGAAGAGACAAACACCTACAAGTCAATAGGAAGAACGTTTGTTCTAGAGCCCAAGACAGTGCTGGAGGGTGAACAAGAGCAAAAA
Microexon-tag Amino Acid Seq MEELRPLPEETNTYKSIGRTFVLEPKTVLEGEQEQK
Microexon-tag spanning region3046096-3046362
Microexon-tag prediction score0.9588
Overlapped with the annotated transcript (%) 100
New Transcript ID AT2G07340.1x
Reference Transcript ID AT2G07340.1
Gene ID AT2G07340
Gene Name PFD1
Transcript ID AT2G07340.1
Protein ID AT2G07340.1
Gene ID AT2G07340
Gene Name PFD1
Pfam domain motif Prefoldin_2
Motif E-value 6.3e-21
Motif start 12
Motif end 115
Protein seq >AT2G07340.1
MADEATRAAFMEIQASMIELTGKLKQVQNQMRNKEGDRKRAFLTLEELRPLPEETNTYKSIGRTFVLEPKTVLEGEQEQK
LKDSEAAVASLQTSKEYLEKQVAEVENNLRELLQQEPGIAQQIMSMSM*
CDS seq >AT2G07340.1
ATGGCGGACGAAGCAACCAGAGCTGCTTTTATGGAGATTCAAGCTAGCATGATTGAACTCACTGGGAAGCTCAAACAGGT
GCAGAATCAGATGCGCAACAAAGAGGGAGATAGAAAGCGAGCTTTCTTAACCTTGGAGGAGCTGAGGCCATTGCCTGAAG
AGACAAACACCTACAAGTCAATAGGAAGAACGTTTGTTCTAGAGCCCAAGACAGTGCTGGAGGGTGAACAAGAGCAAAAA
CTCAAGGACAGTGAAGCTGCCGTTGCTTCTCTACAGACATCCAAGGAATACTTGGAGAAGCAGGTAGCAGAGGTTGAGAA
CAACTTGAGGGAGCTGTTGCAGCAAGAACCGGGCATTGCTCAACAGATTATGTCCATGTCTATGTAA
Microexon DNA seq GAAGAAC
Microexon Amino Acid seq GRT
Microexon-tag DNA Seq TTGGAGGAGCTGAGGCCATTGCCTGAAGAGACAAACACCTACAAGTCAATAGGAAGAACGTTTGTTCTAGAGCCCAAGACAGTGCTGGAGGGTGAACAAGAGCAAAAA
Microexon-tag Amino Acid seq MEELRPLPEETNTYKSIGRTFVLEPKTVLEGEQEQK
Transcript ID AT2G07340.1
Gene ID At.7927
Gene Name PFD1
Pfam domain motif Prefoldin_2
Motif E-value 6.5e-21
Motif start 12
Motif end 115
Protein seq >AT2G07340.1
MADEATRAAFMEIQASMIELTGKLKQVQNQMRNKEGDRKRAFLTLEELRPLPEETNTYKSIGRTFVLEPKTVLEGEQEQK
LKDSEAAVASLQTSKEYLEKQVAEVENNLRELLQQEPGIAQQIMSMSM*
CDS seq >AT2G07340.1
ATGGCGGACGAAGCAACCAGAGCTGCTTTTATGGAGATTCAAGCTAGCATGATTGAACTCACTGGGAAGCTCAAACAGGT
GCAGAATCAGATGCGCAACAAAGAGGGAGATAGAAAGCGAGCTTTCTTAACCTTGGAGGAGCTGAGGCCATTGCCTGAAG
AGACAAACACCTACAAGTCAATAGGAAGAACGTTTGTTCTAGAGCCCAAGACAGTGCTGGAGGGTGAACAAGAGCAAAAA
CTCAAGGACAGTGAAGCTGCCGTTGCTTCTCTACAGACATCCAAGGAATACTTGGAGAAGCAGGTAGCAGAGGTTGAGAA
CAACTTGAGGGAGCTGTTGCAGCAAGAACCGGGCATTGCTCAACAGATTATGTCCATGTCTATGTAA