| Microexon ID | Zm_2:11680893-11680899:- |
| Species | Zea mays | Coordinates | 2:11680893..11680899 |
| Microexon Cluster ID | MEP13 |
| Size | 7 |
| Phase | 0 |
| Pfam Domain Motif | DNA_ligase_A_M |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 13,38,7,50 |
| Microexon location in the Microexon-tag | 3 |
| Microexon-tag DNA Seq | AAYCAGGAAATWGCMAAGGCWGCAARRGAKGGRYTKGMSASTGATMGACAGTTRTGYTATGTTGCWTTTGAYRTTCTKTATGYTGGAGAYACYAGYGTYATYCAYCAR |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTGTGTT |
| Microexon Amino Acid seq | LCY |
| Microexon-tag DNA Seq | AACCAGGAAATAGCTAAGGCTGCAAGAGAGGGATTGGAGACTGATCGACAGTTGTGTTATGTTGTTTTTGACATCCTTTATGCTGGAGACACCAGTGTTATCCACCAA |
| Microexon-tag Amino Acid Seq | NQEIAKAAREGLETDRQLCYVVFDILYAGDTSVIHQ |
| Microexon-tag spanning region | 11680585-11681120 |
| Microexon-tag prediction score | 0.9745 |
| Overlapped with the annotated transcript (%) | 88.6 |
| New Transcript ID | Zm00001d002390_T001x |
| Reference Transcript ID | Zm00001d002390_T001 |
| Gene ID | Zm00001d002390 |
| Gene Name | NA |
Zm_2:11680893-11680899:- does not have available information here.
| Microexon DNA seq | TTGTGTT |
| Microexon Amino Acid seq | LCY |
| Microexon-tag DNA Seq | AACCAGGAAATAGCTAAGGCTGCAAGAGAGGGATTGGAGACTGATCGACAGTTGTGTTATGTTGTTTTTGACATCCTTTATGCTGGAGACACCAGTGTTATCCACCAA |
| Microexon-tag Amino Acid seq | NQEIAKAAREGLETDRQLCYVVFDILYAGDTSVIHQ |
| Transcript ID | Zm.9025.1 |
| Gene ID | Zm.9025 |
| Gene Name | NA |
| Pfam domain motif | DNA_ligase_A_M |
| Motif E-value | 4.2e-43 |
| Motif start | 228 |
| Motif end | 443 |
| Protein seq | >Zm.9025.1 MAAKVRFGLLVAMFQAMSGDKSSAKKRGRLRAFLDRAYVPCGGRDDYFSALRLVLPGLDRERGSYGLKEAALAAVLVDAL GIAKDSTDAVRLTNWRRGGGGRNAGNFSLVAAEILQRRQGITSGGLTIKEVNDALDRLATTENRSEKALILSNLIKKTNA LEMKWLLMIILKDLKLGISEKSIFEEFHPDAQDLFNVTCDLKFVCEKLNDRSQRHKRQDIEIGKAVRPQLALRVRDSSVA WKKLHGKQVVAECKFDGDRIQIHKNGEEIHFFSRSFLDHTEYAPGMSKIIKENILVDRCILDGEMLVWDTVLNRFAEFGS NQEIAKAAREGLETDRQLCYVVFDILYAGDTSVIHQSLTERHQILQKVVKQLKGHLEILIPRRGLNVPRPSDEPCWSIIA HNAEDVDKFFKETIENRDEGIVLKDLDSKWEPGDRNGKWLKLKPDYIHAGADLDVIIIGGYYGSGRQGGEVAQFLVGLAV PSDDNSYPKRFLSFCRVGTGLSDEERDALVTKLNPYFRKNEYPKKPPKFYEVTNNSKERPDVWIESPDKSVIISVTSDIR TIKSEVFAAPYCLRFPRIQRVRYDKPWHECLDVQAFVDIVHSNNGTIQRVADDNSLKNDDTKHSRTNKKVEKCVSIIPSH FMKTDVSGLKGETLIFANLIFYFVNIPSSYNLEYFHKLVVENGGSFSMNLNDSVTHCIAAEKKGIKYQAALRQGRIIHYE WILDCCKEKHLLHLHPRYILFIADFARHKFPEEIDSYADYYYWDIEIADLKQIFCNIDKVSGDSNMVIQYKKKHCIDERF CFFQGCCVYLHNAPLVNADYNVISDLALKRVKQDLTMHGGQVCSSIAPATHLVVVSVLQVYNFDNLYKSFPPAERRYLHD KRLHVVSNKWLEDSVEKQMKLSETAYSLKPDTLEELEIKRSEENVQPPEHKFEEHKEVERSHAENMPRKRSRPTSSRTAR AAPRAVRRIRPRRGNQKAKIGDVESEESGPSECQDDENLDTDDTSKIEEGITNKNKGLPAPASKPAWRTGATKGNQHTKI DDSGSEESGPCETAQDDYISKMEVDNIDNDRGPPPGAQLFTLGEQEVKGVKLNTVEEKQDSPFQRTTAAEAMSSTPGEKI EQMADPLHAMLLDMLPLLGQKRTEDTSKAPLAKAEKDPPAIGSSTSNSEILLPDAGTSGVPAPEPSAAPPKKKKVSYRDV VSELLKDW* |
| CDS seq | >Zm.9025.1 ATGGCGGCGAAGGTGCGGTTCGGCCTACTGGTGGCGATGTTCCAGGCCATGTCGGGCGACAAGAGTTCGGCGAAGAAGCG CGGCCGCCTGCGCGCGTTCCTCGACCGCGCCTACGTGCCCTGTGGCGGTAGGGATGACTACTTCAGCGCGCTCCGCCTCG TGCTGCCGGGGCTCGACCGTGAGCGCGGCTCCTACGGTCTCAAGGAGGCGGCCCTCGCCGCCGTGCTTGTGGACGCCCTT GGCATCGCCAAGGACTCTACCGACGCCGTCCGGCTCACCAACTGGCGCCGCGGTGGGGGTGGCCGCAACGCCGGCAACTT TTCGCTTGTGGCCGCTGAGATCTTGCAACGGAGGCAAGGTATAACTTCTGGCGGATTGACGATAAAGGAGGTCAATGATG CACTTGATCGTCTAGCTACAACTGAGAACAGGTCTGAGAAGGCTTTAATACTTTCCAATCTGATCAAGAAAACCAATGCC CTTGAAATGAAGTGGCTTCTGATGATAATTCTTAAAGATTTGAAATTAGGGATAAGCGAGAAGAGCATATTCGAAGAATT TCATCCTGATGCGCAAGACTTGTTCAATGTCACTTGTGACTTGAAATTTGTCTGTGAGAAGCTCAATGATCGAAGCCAAA GGCATAAACGCCAGGATATAGAAATTGGGAAGGCTGTCAGGCCTCAGCTAGCTTTGAGAGTTCGTGATTCTTCAGTTGCT TGGAAGAAGCTTCATGGAAAACAAGTAGTTGCTGAGTGCAAATTTGATGGTGACCGTATTCAAATCCACAAAAATGGGGA AGAGATTCATTTCTTCTCTAGGAGCTTTCTTGATCACACTGAATACGCACCTGGGATGTCAAAGATTATTAAAGAAAATA TCTTGGTTGACAGATGTATATTGGACGGAGAAATGCTTGTCTGGGACACTGTACTTAACCGTTTTGCTGAATTTGGCTCA AACCAGGAAATAGCTAAGGCTGCAAGAGAGGGATTGGAGACTGATCGACAGTTGTGTTATGTTGTTTTTGACATCCTTTA TGCTGGAGACACCAGTGTTATCCACCAAAGTTTGACGGAGCGGCATCAAATTCTGCAGAAGGTTGTGAAACAGTTAAAGG GTCATCTTGAGATTTTGATCCCAAGACGTGGTTTAAATGTCCCTCGCCCTTCAGATGAACCATGCTGGTCGATTATTGCA CATAATGCTGAAGACGTTGATAAATTCTTCAAAGAGACTATCGAGAACAGAGATGAGGGCATTGTACTGAAGGACCTTGA TTCCAAATGGGAACCTGGTGATCGAAATGGAAAGTGGCTTAAACTAAAGCCTGATTATATACACGCGGGTGCCGATCTGG ATGTTATTATTATAGGGGGATACTATGGATCAGGACGTCAAGGTGGAGAGGTCGCACAGTTTTTAGTTGGCCTTGCAGTC CCTTCAGATGATAATAGTTATCCCAAAAGGTTCCTTTCGTTTTGCCGAGTTGGTACTGGCCTCTCTGATGAAGAGCGTGA TGCTCTTGTCACCAAACTGAACCCTTATTTCAGGAAAAATGAGTACCCCAAAAAACCACCAAAATTCTATGAAGTTACAA ATAACTCAAAGGAGAGACCAGATGTTTGGATTGAAAGTCCTGATAAGTCAGTCATAATATCTGTAACAAGTGACATTCGT ACAATCAAGTCTGAGGTATTTGCTGCTCCATACTGTTTGAGGTTCCCCCGTATTCAGCGAGTGAGATATGACAAGCCATG GCATGAGTGCCTTGATGTGCAGGCATTTGTGGACATTGTGCATTCAAATAATGGTACAATACAAAGGGTGGCAGATGATA ATAGCCTGAAGAATGATGACACAAAACATTCAAGAACAAACAAAAAAGTAGAGAAGTGTGTCTCAATCATCCCTTCACAT TTCATGAAAACTGATGTATCAGGTCTCAAGGGAGAAACCTTGATATTTGCCAACCTGATTTTCTATTTTGTCAACATTCC ATCATCATATAATCTCGAATATTTTCATAAACTGGTTGTGGAAAATGGGGGATCTTTCTCCATGAATCTCAATGACTCTG TTACACACTGCATAGCTGCGGAGAAGAAAGGTATCAAATATCAGGCAGCTTTACGACAGGGAAGAATCATTCACTATGAG TGGATATTAGACTGTTGCAAGGAAAAACATCTTCTTCATTTGCATCCTAGGTATATACTATTTATTGCTGATTTCGCTAG GCACAAATTTCCTGAAGAGATCGATTCATACGCTGACTATTACTACTGGGACATTGAAATTGCTGACCTCAAGCAGATTT TCTGTAACATTGACAAAGTTTCTGGTGATTCAAACATGGTTATTCAGTACAAAAAGAAGCATTGCATAGATGAAAGATTC TGTTTCTTCCAGGGTTGCTGTGTCTACTTGCATAATGCGCCCTTAGTGAATGCGGACTACAATGTAATATCTGATCTTGC ACTGAAGAGGGTGAAGCAGGATCTAACAATGCATGGTGGTCAAGTCTGCAGCAGTATTGCTCCAGCTACTCATTTGGTAG TAGTTTCGGTTTTACAGGTCTATAACTTTGATAACCTGTACAAGAGCTTCCCTCCCGCTGAAAGACGTTATCTACATGAC AAAAGATTACATGTTGTCAGTAACAAGTGGTTGGAAGATTCAGTGGAGAAACAAATGAAGCTCTCTGAAACTGCTTACAG CCTTAAACCAGATACACTAGAAGAACTAGAAATTAAAAGGAGTGAGGAAAATGTTCAGCCTCCGGAGCATAAGTTTGAGG AACACAAGGAGGTTGAAAGATCTCATGCGGAAAATATGCCAAGGAAAAGGAGTAGGCCAACCAGTTCAAGAACTGCAAGG GCTGCTCCTAGAGCAGTCCGCCGAATAAGGCCTAGAAGAGGAAACCAGAAAGCAAAAATAGGTGATGTTGAATCTGAAGA AAGTGGCCCCAGCGAATGCCAAGATGATGAAAATTTGGACACAGATGATACCTCTAAGATTGAAGAAGGTATTACCAACA AAAACAAAGGACTCCCTGCACCTGCTTCAAAACCAGCCTGGAGAACAGGGGCTACAAAAGGAAATCAGCATACAAAAATA GATGACAGCGGATCTGAAGAAAGTGGGCCTTGTGAAACAGCGCAAGATGATTACATCTCTAAGATGGAAGTAGATAACAT TGATAATGACCGTGGACCACCGCCAGGTGCTCAGCTTTTCACGTTGGGGGAGCAAGAGGTCAAAGGTGTCAAATTGAACA CCGTGGAGGAGAAACAAGACAGCCCTTTCCAGAGAACAACCGCTGCTGAAGCGATGAGTAGCACGCCTGGTGAGAAGATA GAACAAATGGCTGATCCGTTGCACGCCATGCTTCTGGATATGTTGCCACTCCTGGGCCAGAAAAGGACAGAAGATACAAG CAAGGCGCCCTTGGCGAAAGCTGAGAAGGATCCACCTGCGATAGGAAGCTCCACATCCAATTCTGAGATTCTGTTGCCAG ATGCTGGAACATCCGGGGTTCCAGCCCCAGAGCCAAGTGCAGCTCCACCAAAGAAGAAAAAAGTGAGTTACAGAGATGTC GTTAGTGAACTTCTGAAAGATTGGTGA |