Microexon ID Sl_7:8742799-8742805:+
Species Solanum   Lycopersicum
Coordinates 7:8742799..8742805
Microexon Cluster ID MEP13
Size 7
Phase 0
Pfam Domain Motif DNA_ligase_A_M
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 13,38,7,50
Microexon location in the Microexon-tag 3
Microexon-tag DNA Seq AAYCAGGAAATWGCMAAGGCWGCAARRGAKGGRYTKGMSASTGATMGACAGTTRTGYTATGTTGCWTTTGAYRTTCTKTATGYTGGAGAYACYAGYGTYATYCAYCAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTGTGTT
Microexon Amino Acid seq LCY
Microexon-tag DNA Seq AATCAAGAAATAGCAAAGGCAGCAAGAGAGGGTCTTGATAGTGATAGGCAGTTGTGTTATGTTGCGTTCGATATTCTTTATGTTGGGGATACCAGTGTTATTCATCGG
Microexon-tag Amino Acid Seq NQEIAKAAREGLDSDRQLCYVAFDILYVGDTSVIHR
Microexon-tag spanning region8742520-8742992
Microexon-tag prediction score0.9391
Overlapped with the annotated transcript (%) 100
New Transcript ID Solyc07g018000.3.1x
Reference Transcript ID Solyc07g018000.3.1
Gene ID Solyc07g018000.3
Gene Name NA
Transcript ID Solyc07g018000.3.1
Protein ID
Gene ID Solyc07g018000.3
Gene Name
Pfam domain motif DNA_ligase_A_M
Motif E-value 2.00E-41
Motif start 241
Motif end 456
Protein seq >Solyc07g018000.3.1
MATSAVDGGGNSSVGGEDIKFSVMVSLFKWIQKSKSSVKKRSKFRKFMDTFCRKPQDNFVAMRLILPGLDRERGSYGLKE
HVLATCLIDALAMSRDSDDARRLLNWRKGGPKTGSNAGNFSLVAAEVLQRRQGMASAGLTIKELNDFLDHLASSENRAEK
TSILSDLIRKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRSQRHKRQDIEVGKPVR
PQLALRVSNVSAAWKKLYGKEVVVECKFDGDRIQIHKNNSELNFFSRNFLDHQEYAHGMSDVITQNILADKCILDGEMLV
WDASINRFAEFGSNQEIAKAAREGLDSDRQLCYVAFDILYVGDTSVIHRSLKERQEILQKVVKPIKGRLEILVPNGGLNA
HRLSGEPCWSIIAHSVDDVDKFFKGTVENRDEGIVLKDLTSKWEPSDRSGKWLKLKPDYVRPGSDLDVLIIGGYYGSGRH
GGEVAQFLVGLAEPPAPNTYPRRFISFCRVGTGVSDEERNTIVTRLKPYFRKYEYPKQAPPTFYQVTNNSKERPDVWVES
PEKYISIIVSITSDIRTTRTEVFAAPYSLRFPRIDKVRYDKPWHECLDVQSFVDLVHSTNGTTQREDNYGVEQDHESKTI
RSSRKREKKNVFAVPSHFVQTDVSRIKGETSMFSDMVFYFANVPSSHTLESLHKMVVEHGGAFSMNLNKSVTHCIAAESR
GIKFQAAKLHGDVIQCSWLFDCCLQKKLLPLQPKYFLFLSDSTKKKMEAEVDEYSDSFFSDISIEEIKLLLRNIEHPEDS
KTVEYYKKKYCPKDEWARFHGCCIYFFIPKQCLEYSDCKVLVELAMKRMKVEISVGGGKVGDNLFHATHVVVMSLPEIDV
KFNEVLNSFSEAEKHVLYNTKLHVVGARWLEDSLKEDQKLLEESYSLKPSNFQMSISEKSRHDKQKGDSEKCKRPSSLDK
HGGQIKAKGISDQGRAITLPKRGRKRDRGRPTGSATAKGKVGINIPRTVKRKVTSSRAKIHENESDESATSCEHLRNDEG
EAAVGSYETTAVRSSGVQNEDVQDLELSEDGKTLPPGTAECSVINERLDKAHETSYGSGNIARGKDKVDEKLEDPVDPVQ
AMLLHMIPHLDSKPTRSIDTLVKDDKPDADTNPSPKKKKKISYKDVAGELLKDW*
CDS seq >Solyc07g018000.3.1
ATGGCGACTTCCGCCGTAGACGGTGGTGGTAATAGTAGTGTTGGCGGAGAAGACATAAAATTTAGTGTAATGGTTAGCCT
TTTTAAGTGGATACAGAAGAGTAAATCATCAGTGAAGAAGCGGTCCAAGTTCCGGAAGTTTATGGATACCTTCTGCAGGA
AGCCTCAGGACAATTTCGTTGCCATGCGCCTTATTCTCCCTGGCCTCGACCGTGAGCGTGGCTCTTATGGCCTTAAGGAG
CACGTCCTCGCTACTTGCCTCATTGACGCACTTGCAATGTCCCGCGATTCCGATGATGCACGCCGTCTCCTTAACTGGCG
GAAAGGCGGTCCCAAAACTGGCTCTAATGCCGGCAACTTCTCTCTTGTTGCCGCTGAGGTCCTCCAGCGCAGACAGGGAA
TGGCTTCTGCTGGGCTAACAATTAAGGAACTAAATGACTTCCTTGATCACTTGGCCTCAAGTGAAAATAGAGCAGAGAAG
ACTTCAATTCTGTCTGATCTAATCAGGAAAACAAATGCTCAAGAAATGAAATGGATTATAATGATAATCCTCAAAGATCT
TAAGTTGGGAATTAGTGAAAAGAGCATCTTCCATGAATTCCATCCAGATGCAGAGGACTTATTCAATGTCACATGCGATC
TAAAATTAGTTTGTGAAAAGTTGAGGGACAGAAGTCAACGACATAAACGCCAGGATATTGAAGTTGGAAAACCTGTCCGC
CCTCAGCTGGCTCTTAGGGTCAGCAATGTATCTGCTGCATGGAAAAAGCTTTACGGGAAAGAAGTAGTTGTTGAGTGCAA
ATTTGATGGGGATCGCATCCAGATTCACAAAAATAATTCTGAGCTAAACTTCTTTTCAAGAAACTTTCTGGATCATCAAG
AGTATGCTCATGGGATGTCAGATGTTATTACTCAGAATATCCTCGCTGACAAGTGCATACTCGATGGTGAAATGTTGGTT
TGGGATGCATCAATAAACCGCTTTGCAGAGTTCGGTTCCAATCAAGAAATAGCAAAGGCAGCAAGAGAGGGTCTTGATAG
TGATAGGCAGTTGTGTTATGTTGCGTTCGATATTCTTTATGTTGGGGATACCAGTGTTATTCATCGGAGCTTGAAGGAAC
GTCAAGAGATTCTCCAGAAAGTTGTGAAGCCCATAAAAGGCCGTTTAGAAATTTTGGTCCCTAATGGCGGTCTTAATGCT
CATCGTCTTTCTGGGGAGCCCTGTTGGTCGATCATTGCTCATAGTGTTGACGATGTCGATAAATTCTTTAAAGGAACTGT
TGAGAATAGAGACGAAGGAATAGTTTTGAAAGATTTAACTTCAAAATGGGAACCAAGTGATCGGAGTGGAAAATGGCTAA
AGTTGAAGCCTGATTATGTTCGACCTGGCTCTGATTTGGATGTTCTTATTATCGGAGGCTACTATGGTTCTGGGCGACAT
GGAGGAGAGGTAGCTCAATTTCTGGTGGGTCTTGCTGAGCCTCCGGCTCCAAATACATATCCCAGAAGGTTCATTTCTTT
TTGCAGAGTAGGCACTGGAGTTTCTGATGAGGAACGCAATACCATAGTAACTCGATTAAAACCTTATTTCAGGAAGTATG
AGTACCCGAAGCAGGCACCACCAACCTTTTATCAAGTAACAAATAATTCAAAAGAGCGACCCGACGTGTGGGTTGAAAGT
CCAGAGAAGTATATATCCATCATTGTTTCAATTACAAGTGATATTAGAACAACAAGAACTGAGGTGTTTGCTGCTCCATA
CAGCTTGAGATTTCCGCGTATTGATAAAGTCAGATATGACAAGCCTTGGCATGAGTGTCTTGATGTGCAATCATTTGTTG
ATCTGGTACATTCAACCAATGGTACCACGCAGAGGGAGGACAATTATGGGGTTGAGCAGGATCATGAATCAAAGACCATT
AGGTCGTCAAGAAAACGAGAGAAGAAGAATGTCTTTGCAGTTCCTTCTCATTTTGTTCAGACTGACGTGTCTCGAATTAA
GGGTGAAACATCAATGTTCTCTGACATGGTGTTTTATTTTGCTAATGTGCCTTCATCACATACACTAGAATCCTTGCATA
AAATGGTTGTTGAGCATGGGGGTGCTTTCTCCATGAATTTGAATAAGTCAGTTACTCATTGTATAGCAGCTGAAAGTAGA
GGTATCAAGTTTCAAGCTGCAAAACTTCATGGAGATGTTATTCAATGCTCTTGGCTCTTTGACTGCTGTCTGCAAAAGAA
GCTCCTTCCTTTACAGCCAAAGTATTTTCTTTTCCTTTCTGATTCAACAAAGAAAAAGATGGAAGCAGAAGTGGATGAAT
ATTCTGATTCTTTCTTCTCCGACATCAGCATTGAAGAAATTAAACTGCTTTTGAGAAATATAGAACACCCAGAAGACTCC
AAAACTGTCGAGTACTACAAGAAAAAGTACTGTCCCAAGGATGAATGGGCTCGGTTTCATGGTTGCTGCATTTATTTTTT
CATACCAAAGCAGTGTCTGGAATATTCAGATTGCAAGGTTTTAGTGGAACTTGCTATGAAGAGGATGAAAGTTGAAATTT
CTGTTGGTGGTGGGAAAGTTGGTGACAATCTTTTTCATGCCACCCATGTCGTCGTCATGTCTCTACCAGAGATCGATGTA
AAGTTCAATGAAGTGTTAAATAGTTTCTCAGAGGCTGAGAAACATGTTTTGTACAATACAAAGCTGCATGTAGTCGGAGC
ACGGTGGTTGGAGGATTCCCTTAAAGAGGACCAGAAGTTGCTTGAGGAGAGTTATAGCCTTAAGCCTAGCAATTTTCAAA
TGTCAATCTCTGAGAAGAGTAGGCATGATAAGCAAAAAGGTGATTCTGAAAAGTGCAAAAGACCATCTTCCCTTGATAAA
CATGGAGGACAAATCAAAGCAAAAGGAATTTCAGACCAGGGCCGAGCTATCACACTACCAAAGAGGGGCAGGAAACGAGA
TAGAGGAAGACCTACTGGTAGTGCTACAGCAAAAGGGAAAGTGGGGATCAACATTCCACGTACAGTTAAACGCAAGGTCA
CAAGTAGTCGTGCTAAGATTCATGAAAATGAATCTGATGAAAGTGCTACTTCATGTGAGCATCTTCGTAATGACGAGGGT
GAAGCGGCTGTTGGGAGCTATGAAACTACTGCAGTACGTAGCTCAGGAGTTCAGAATGAGGATGTACAGGATCTGGAATT
GTCAGAAGATGGTAAAACACTTCCACCAGGGACTGCTGAATGCAGTGTGATCAATGAAAGATTGGACAAAGCTCACGAAA
CTTCATATGGAAGTGGAAATATTGCCAGGGGCAAAGACAAGGTGGATGAAAAGCTGGAAGACCCTGTTGATCCAGTCCAA
GCTATGCTATTGCATATGATACCCCACTTGGATAGTAAGCCAACAAGAAGCATAGACACTCTTGTAAAAGACGACAAGCC
AGATGCAGATACTAATCCCAGTCCTAAAAAGAAAAAGAAAATTAGCTATAAAGATGTAGCTGGTGAGTTGCTCAAAGATT
GGTGA
Sl_7:8742799-8742805:+ does not have available information here.