| Microexon ID | Pt_18:14738944-14738950:- |
| Species | Populus Trichocarpa | Coordinates | 18:14738944..14738950 |
| Microexon Cluster ID | MEP13 |
| Size | 7 |
| Phase | 0 |
| Pfam Domain Motif | DNA_ligase_A_M |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 13,38,7,50 |
| Microexon location in the Microexon-tag | 3 |
| Microexon-tag DNA Seq | AAYCAGGAAATWGCMAAGGCWGCAARRGAKGGRYTKGMSASTGATMGACAGTTRTGYTATGTTGCWTTTGAYRTTCTKTATGYTGGAGAYACYAGYGTYATYCAYCAR |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTATGCT |
| Microexon Amino Acid seq | LCY |
| Microexon-tag DNA Seq | AATCAAGAAATAGCAAAGGCTGCAAGGGATGGGCTTGATAGTGATAGACAGTTATGCTATGTTGCATTTGATATTCTTTATGTTGGAGATACAAGTGTGATTCACCAA |
| Microexon-tag Amino Acid Seq | NQEIAKAARDGLDSDRQLCYVAFDILYVGDTSVIHQ |
| Microexon-tag spanning region | 14738735-14739223 |
| Microexon-tag prediction score | 0.957 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.018G141900.1.v4.1x |
| Reference Transcript ID | Potri.018G141900.1.v4.1 |
| Gene ID | Potri.018G141900.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.018G141900.1.v4.1 |
| Protein ID | |
| Gene ID | Potri.018G141900.v4.1 |
| Gene Name | |
| Pfam domain motif | DNA_ligase_A_M |
| Motif E-value | 6.40E-43 |
| Motif start | 235 |
| Motif end | 450 |
| Protein seq | >Potri.018G141900.1.v4.1 MASSSSSSSTAHTKFSILVSLFNWISKTKTSSRKRSKFRKFIDTFCSPSDYFSAVRLILPNLDRERGTYGLKESVLAVSL IEALGMSRDSPDALKLINWRKGGANATGANAGNFSLVAAEVLQRRQGTVSGGLTIEELNGLLDKLASSENRGEKTAVLAA LINKTNTQEMKWIIMIILKDLKLGMSEKSVFHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAMR VSDAHAAWKKLHGKEVVVECKFDGDRIQIHKNGAEVHYFSRNFLDHSEYAHGMSDIIVQNVLDERCILDGEMLVWDTSLN RFAEFGSNQEIAKAARDGLDSDRQLCYVAFDILYVGDTSVIHQTLKERHELLRKVVKPVKGRLEILVPNGGLNAHRLPGE PYCSLIAYNVDDIEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQ FLLGLAERPASNTYPRRFISFCRVGNGLSDEELDTVVSKLKPYFRKNEYPKNSPPSFYQVTNNSKERPDVWIENPDKSII LSITSDIRTISSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVELVHSSNGTTQKGKGYGYVQDSKPTHIKSSRKGEK KSVSVVPSHLIQTDISDIKGETLIFSNMMFYFVNVPPSNSLESLHKMVAENGGTFSMNLNNSVTHCIAAESKGIKYQAAK LHGDIIHYSWVLDCCLQKKLLPLQPKSFLFLSDGSKKKLHEEIDEFSDSYYWDLDLSDIKQLLSNINASEDAKAIDDLKQ KYCPEEKWSLFHGCCVYFHISRESLTPDWESLLGLAFRRLKLEIFMGGGKVSNNIAHATHLVVLIVPASDVDFGSLVKSF TTAEKHFLLNKRLYVIGSQWLEDSLERGQKLLEDTYNLKPSGLEESNCKEVVCDLDMEEATPILDGAENERLPSVTDSEA KEKGSKAALKDSNKLGSLEKETTRKRGRPAGGSTKKGKIGAGQARRTRARIVNKPAKISVEKSDESCSHDDKNEENDTSD GDDEIHGGKPAGGITKKRKMGAGLARRTRACIVNKPAKISEEKPDESCSHDDKNEENEMSEGNYEIHGGRPAGGSTKKGK IGAGQALRTRTRIANKPAKILEEKSEESCLHDDEIEENEMSEGNEEIHGPVSKYNLDIQQTKTVEDSESSRRDKAKEETA EENRHEEWLDKAPDVEMSERYYDQVTEKPEKLEVMVDPVHAILMDMIPSLGIKKGETTNPTIDNEKQAEGPYAQSSLSMK KAENTTPTLDTEKPAENPSLLSVKKKVSYKDLAAKLLMN* |
| CDS seq | >Potri.018G141900.1.v4.1 ATGGCTTCCTCTTCCTCTTCGTCGTCAACTGCGCACACGAAATTCTCCATCTTAGTGAGTCTCTTCAACTGGATTTCAAA GACCAAAACTTCCTCCAGAAAACGCTCTAAATTCCGCAAATTCATCGACACTTTCTGCTCTCCGTCCGATTACTTCTCCG CCGTCCGCTTGATCCTACCTAACCTCGACCGCGAACGCGGCACTTATGGTCTCAAAGAATCTGTCCTCGCCGTTTCCCTC ATTGAAGCACTCGGCATGTCCAGGGATTCCCCTGATGCCTTGAAGTTGATTAATTGGCGTAAAGGTGGCGCCAACGCTAC CGGTGCTAATGCCGGCAATTTCTCTCTCGTTGCTGCCGAAGTGTTGCAGCGGAGGCAGGGAACGGTGTCGGGTGGGTTGA CGATTGAGGAGCTGAATGGTTTGCTTGATAAATTGGCATCCAGTGAAAATAGGGGTGAGAAAACTGCAGTACTTGCTGCT TTGATAAACAAGACAAATACACAGGAAATGAAGTGGATTATTATGATTATTCTTAAAGATTTGAAGTTGGGGATGAGTGA AAAGAGTGTATTTCATGAATTTCACCCGGATGCGGAAGACTTGTTTAATGTTACATGTGACTTGAAATTGGTTTGTGAAA AGCTGAGGGATCGAAATCAAAGGCATAAACGTCAGGATATTGAAGTTGGAAAAGCAGTGCGCCCTCAACTAGCAATGAGA GTTAGTGATGCACATGCTGCATGGAAAAAGTTGCATGGGAAGGAAGTGGTGGTGGAATGTAAATTTGATGGTGATCGCAT CCAAATACATAAGAATGGTGCGGAAGTACACTATTTCTCAAGGAACTTTCTAGATCACTCTGAATATGCTCATGGAATGT CGGACATTATTGTACAAAATGTTTTGGATGAGAGGTGTATTCTTGATGGTGAAATGCTGGTCTGGGATACATCTTTGAAT CGGTTTGCAGAGTTTGGTTCAAATCAAGAAATAGCAAAGGCTGCAAGGGATGGGCTTGATAGTGATAGACAGTTATGCTA TGTTGCATTTGATATTCTTTATGTTGGAGATACAAGTGTGATTCACCAAACCTTGAAGGAAAGGCATGAGCTGCTCCGTA AAGTTGTCAAGCCAGTGAAGGGTCGTTTAGAGATCTTAGTACCTAATGGGGGTCTTAATGCTCATCGTCTTCCTGGGGAA CCTTATTGTTCGCTTATTGCATATAACGTGGATGACATTGAGAAGTTTTTTAAGGAAACCATTGAAAACAGGGATGAAGG TATTGTATTAAAAGACCTTGGTTCCAAATGGGAACCAAGTGATCGGAGTGGAAAGTGGTTGAAACTGAAGCCTGAGTACA TTCGTGCTGGTTCTGACTTAGATGTTCTTATCATAGGGGGATACTATGGTTCTGGACGTCGTGGAGGAGAGGTGGCTCAA TTCTTGTTGGGTCTAGCAGAGCGTCCTGCTTCTAATACATATCCCAGGCGATTTATCTCCTTTTGCAGAGTGGGCAATGG GCTGTCAGATGAGGAGCTGGATACTGTTGTCTCCAAACTAAAGCCTTATTTTAGGAAGAATGAATACCCAAAGAACTCAC CACCAAGTTTTTATCAAGTTACAAATAATTCAAAAGAGAGACCAGATGTGTGGATTGAAAACCCTGACAAATCAATTATA CTTTCCATTACCAGTGATATTCGGACTATAAGTTCTGAGGTGTTTTCTGCCCCATACAGCTTGAGATTTCCGCGTATTGA CAGAGTGAGATATGACAAGCCTTGGCATGAATGTCTTGATGTGCAGTCATTTGTAGAGCTAGTACATTCAAGTAATGGTA CCACACAAAAAGGAAAAGGGTACGGATATGTGCAAGATAGCAAACCGACACACATAAAATCCTCTAGGAAAGGAGAGAAA AAGAGTGTGTCTGTTGTTCCATCTCATTTAATTCAGACTGATATTTCTGACATCAAGGGGGAAACTTTGATATTTTCAAA TATGATGTTTTACTTTGTCAATGTGCCTCCATCTAATTCTCTCGAATCCTTGCACAAAATGGTTGCTGAGAATGGGGGAA CTTTCTCAATGAATTTAAATAACTCAGTCACCCATTGTATAGCTGCTGAAAGCAAAGGGATTAAATATCAAGCAGCAAAG CTTCACGGAGATATTATTCATTATTCATGGGTCTTGGATTGCTGTTTGCAAAAGAAGCTCCTTCCATTGCAGCCAAAGTC CTTCCTTTTCCTCTCTGATGGTTCAAAGAAGAAGTTACACGAAGAAATTGATGAATTTTCTGATTCTTACTACTGGGACC TTGATCTTTCAGACATCAAACAGCTTTTGAGCAACATAAATGCATCAGAAGATGCCAAAGCCATAGACGACTTAAAGCAA AAGTACTGTCCAGAGGAAAAATGGTCTCTGTTTCATGGCTGCTGTGTATATTTTCACATTTCAAGAGAGTCTTTAACACC CGATTGGGAATCCTTGTTGGGACTTGCATTTAGGAGGTTGAAACTTGAAATTTTCATGGGTGGTGGCAAAGTCAGCAATA ATATTGCTCATGCCACTCATTTGGTGGTCCTGATTGTACCAGCATCTGATGTGGATTTTGGTTCCCTTGTGAAAAGTTTC ACAACTGCAGAGAAACATTTTCTCCTGAATAAGAGGTTGTATGTGATTGGATCTCAATGGTTGGAGGACTCTTTGGAGAG GGGGCAAAAGTTGCTAGAGGATACATATAACTTGAAACCCTCTGGTTTGGAAGAGTCAAACTGCAAAGAAGTTGTATGTG ACCTAGATATGGAAGAAGCAACTCCCATTTTAGATGGTGCAGAAAATGAGAGATTGCCATCAGTTACTGATAGTGAAGCC AAGGAGAAAGGAAGCAAAGCAGCTTTAAAAGATTCAAATAAACTGGGCTCACTTGAAAAGGAGACAACAAGGAAAAGAGG AAGGCCTGCTGGTGGGAGCACAAAAAAAGGAAAAATAGGCGCTGGCCAAGCTCGAAGAACACGGGCACGAATTGTAAACA AGCCTGCTAAAATATCCGTAGAAAAATCAGACGAAAGCTGTTCTCATGATGATAAAAATGAAGAAAATGATACGAGTGAT GGAGATGATGAAATTCATGGAGGGAAGCCTGCTGGTGGGATAACAAAGAAACGAAAAATGGGTGCTGGCCTAGCTCGAAG AACACGTGCATGCATCGTAAACAAGCCTGCTAAAATATCTGAAGAAAAACCAGATGAAAGCTGTTCTCATGATGATAAAA ATGAAGAAAACGAAATGAGTGAAGGAAATTATGAAATTCATGGAGGGAGGCCTGCTGGTGGGAGCACAAAGAAGGGAAAA ATAGGTGCTGGCCAAGCTCTAAGAACACGGACACGAATAGCAAACAAGCCTGCTAAAATACTTGAAGAGAAATCAGAAGA AAGCTGTTTGCATGATGATGAAATTGAAGAAAACGAAATGAGTGAAGGAAATGAAGAAATTCATGGGCCAGTTAGCAAGT ACAATTTGGATATCCAACAAACTAAAACGGTAGAAGATTCAGAATCATCACGGAGAGATAAAGCAAAGGAGGAGACTGCT GAAGAGAACAGACATGAAGAGTGGTTAGATAAAGCTCCTGATGTTGAAATGAGCGAAAGGTATTATGACCAGGTGACTGA GAAGCCTGAGAAACTAGAAGTCATGGTCGATCCAGTTCATGCCATCTTAATGGACATGATTCCAAGCCTTGGTATAAAGA AGGGGGAGACCACAAATCCAACAATTGACAATGAAAAGCAAGCTGAAGGTCCCTATGCACAGTCAAGCCTCAGTATGAAG AAGGCGGAAAATACAACTCCAACCCTAGATACCGAAAAGCCAGCTGAAAATCCCAGTTTACTGTCAGTGAAGAAGAAAGT CAGCTACAAAGATCTTGCTGCCAAACTGCTCATGAATTAG |
Pt_18:14738944-14738950:- does not have available information here.