
Microexon ID | Ps_NC_039364.1:158575500-158575506:- |
Species | Papaver somniferum | Coordinates | NC_039364.1:158575500..158575506 |
Microexon Cluster ID | MEP13 |
Size | 7 |
Phase | 0 |
Pfam Domain Motif | DNA_ligase_A_M |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 13,38,7,50 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | AAYCAGGAAATWGCMAAGGCWGCAARRGAKGGRYTKGMSASTGATMGACAGTTRTGYTATGTTGCWTTTGAYRTTCTKTATGYTGGAGAYACYAGYGTYATYCAYCAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTATGCT |
Microexon Amino Acid seq | LCY |
Microexon-tag DNA Seq | AATCAGGAAATTGCAAAGGCTGCAAGAGAGGGATTCGCCAGTGATAGACAGTTATGCTATGTTGCATTTGACATTCTTTATGTTGGAGACACTAGTGTTATCCATCAG |
Microexon-tag Amino Acid Seq | NQEIAKAAREGFASDRQLCYVAFDILYVGDTSVIHQ |
Microexon-tag spanning region | 158575275-158575746 |
Microexon-tag prediction score | 0.9789 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026547752.1x |
Reference Transcript ID | XM_026547752.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026547752.1 |
Protein ID | XP_026403537.1 |
Gene ID | LOC113298887 |
Gene Name | NA |
Pfam domain motif | DNA_ligase_A_M |
Motif E-value | 2.7e-39 |
Motif start | 229 |
Motif end | 456 |
Protein seq | >XP_026403537.1 MSDQSAVKFSVLCSLFNWMQRSKTSSKKRSKFRKFLDNFCKTGDDYFGSIRLILPSLDRERGSYGLKESVLANCLIDAVG LSKDSEDAKKLISWRKGGSKTGYNVGNFGLVAAEVLQRRQGMISGGLTIKELNNMLDRLASSENRGDKTAVLADLIQKTN AQEMKWIVMIILKDLKIGVSEKSIFQEFHPDAEDLFNVTCDLKLVCEKLKDRSQRHKRQDIEIGKAVRPQLALRISDAAS AWKKLHGKEVVVECKFDGDRIQIHKSGPKINFYSRACGYWKDRNSQRNFLDHPEYEHAMSNVIMQNILVDRCILDGEMLV WDTSTNRFAEFGSNQEIAKAAREGFASDRQLCYVAFDILYVGDTSVIHQSLKERHELLRKVVKPLKGRLEILVPDGGINA HRSSGEPCWSVIVHNVEMVDKFFKATVENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIHTGSDLDVLIIGGYYGSGRR GGEVAQFLVGLAEPSASNTYPRRFISFCRVGTGLSDDELDALVTKLKPYFRKNEYPKKTPSFYELTNHSKERPDVWIDSP EKSIILSITSDIRTVRSEVFAAPYSLRFPRIDRVRYDKPWHECLDLQSFVDLVNSSNGNTRGADYGSSQYNKPKRAKPSS KGDKKKAPIVPSHFLRTDVSGITEETPIFANMMFYFINVPPSHSLDLFRKMVVEHGGEFSMNRNDSVTHCIAAERKGIQF EAAKRRGDVIYYSWVLDCCLQKRLLHLQPKYFLHLGDSSKEKLQEEVDEFADSYYWDLDLADIRQLFNNINPSEDLRSIA YYKKKYCPKTKWSRFQDCCIYFYSLKNSINSDWEFLLETSIKRLRLQVTMGGGEVSEKLSYATHLVVLSVPGCDVEFDSI LESFAAAEKRRLCSKKLHVVAYEWLEDSLEKDQKLDEEKYNLKPDGLEESNIEMSEHEISDTSEKDGKSISEEPAVKNVR TSAASEVVGKRKRGRPTLGNAKRGRTVASQARQTRVKGRTRPAKLDQSEPEKSASSDDTSNKDAIESKRGAQGVQGSITG LSQSRRTRAKMGAKHAKLDENELELSAASENAPSNEATESDRGFHEIHETETKEDDKNSTKEKAEVFDVSQGNNINGIAS MELDGRDDYQDSEKVTGHSEIYNSKGEEKIDVSDKPEVTLDPLQAMLLNMIPSLGVKSEAYQSASGSEVPVRIDPSIGVK KTEASSKPALEDEVPPVRVDPDAGPVQKKKKVSYKDVAGELLKDW* |
CDS seq | >XM_026547752.1 ATGAGTGATCAAAGTGCAGTGAAATTCAGCGTACTATGCAGTTTATTCAATTGGATGCAAAGAAGTAAAACATCATCAAA GAAACGATCAAAGTTCCGGAAATTTCTAGATAATTTCTGTAAAACTGGTGATGATTATTTCGGTTCAATACGATTGATAT TACCATCATTAGATAGAGAAAGAGGAAGTTACGGATTGAAAGAATCAGTACTTGCTAATTGTTTGATCGATGCCGTTGGT TTATCTAAAGATTCTGAAGATGCTAAGAAACTTATTAGTTGGAGAAAAGGTGGGAGTAAAACTGGTTATAATGTTGGGAA TTTTGGTCTTGTTGCTGCTGAGGTACTGCAAAGAAGGCAAGGAATGATATCTGGTGGATTGACGATCAAGGAGTTAAATA ATATGCTTGATCGCTTAGCGTCAAGTGAGAATAGAGGTGACAAGACTGCTGTACTTGCTGATCTCATACAGAAAACAAAT GCACAAGAAATGAAGTGGATTGTCATGATCATTCTAAAAGACCTAAAAATTGGAGTCAGTGAAAAGAGCATTTTCCAAGA ATTTCATCCAGATGCGGAAGACTTGTTTAATGTCACTTGTGACTTAAAACTAGTTTGTGAAAAGCTTAAGGACCGAAGTC AACGGCACAAGCGCCAGGACATAGAAATTGGAAAGGCTGTACGCCCTCAACTAGCTCTGAGGATTAGTGATGCTGCTTCT GCATGGAAAAAGCTTCATGGAAAAGAAGTCGTAGTTGAGTGCAAATTTGATGGCGACCGCATTCAAATTCATAAAAGTGG ACCTAAGATAAACTTCTACTCAAGGGCTTGTGGTTATTGGAAAGACAGGAATTCCCAACGGAACTTTCTTGATCACCCTG AATATGAGCATGCAATGTCAAACGTCATCATGCAGAATATCTTGGTCGATAGGTGCATCCTTGATGGTGAAATGTTGGTC TGGGACACATCTACAAATCGTTTTGCCGAATTTGGGTCTAATCAGGAAATTGCAAAGGCTGCAAGAGAGGGATTCGCCAG TGATAGACAGTTATGCTATGTTGCATTTGACATTCTTTATGTTGGAGACACTAGTGTTATCCATCAGAGCTTGAAAGAGA GACATGAACTTCTTCGGAAAGTGGTAAAGCCTTTAAAGGGCCGTTTGGAAATATTAGTACCGGATGGTGGTATTAATGCT CATCGTTCTTCAGGGGAACCTTGCTGGTCTGTTATTGTGCATAATGTTGAAATGGTTGACAAGTTCTTCAAAGCCACTGT AGAGAATAGAGATGAAGGGATCGTATTGAAAGACCTTGGATCTAAATGGGAACCTAGTGATCGAAGTGGAAAGTGGTTAA AGTTGAAGCCTGATTACATACACACTGGTTCTGATCTGGATGTTCTGATTATAGGTGGGTATTATGGTTCTGGTCGTCGA GGAGGGGAGGTTGCTCAGTTTCTGGTGGGTCTTGCGGAACCTTCAGCCTCTAATACATACCCCAGACGGTTTATATCATT TTGCAGAGTTGGTACTGGCCTTTCTGATGACGAGCTTGATGCATTGGTTACAAAATTGAAGCCCTATTTTAGGAAGAATG AGTACCCAAAGAAGACACCGAGCTTTTATGAACTAACCAACCATTCAAAAGAGAGGCCAGATGTTTGGATTGATAGTCCT GAAAAATCAATCATATTGTCCATAACTAGTGATATCCGAACTGTCAGGTCTGAGGTATTTGCTGCACCCTACAGTTTGAG ATTTCCTCGCATTGACAGGGTGAGATATGACAAACCTTGGCATGAGTGCCTTGATCTGCAGTCTTTTGTGGACTTGGTGA ACTCAAGTAATGGCAACACTAGGGGGGCAGATTATGGAAGCTCTCAATATAATAAACCAAAGCGCGCCAAACCCTCGAGC AAGGGAGACAAGAAGAAGGCCCCTATTGTTCCTTCTCATTTCCTTCGCACAGATGTCTCCGGCATAACAGAAGAAACCCC CATATTTGCAAACATGATGTTTTATTTCATCAATGTACCCCCAAGCCATTCTCTGGATCTCTTTCGCAAAATGGTGGTTG AGCACGGAGGGGAGTTCTCGATGAACCGAAACGATTCAGTTACTCACTGCATTGCAGCAGAAAGAAAAGGTATCCAATTC GAGGCAGCAAAGCGTCGTGGAGACGTTATTTACTACTCATGGGTTCTGGATTGTTGCTTACAAAAGCGTCTTCTGCATTT GCAGCCGAAGTATTTCCTTCATCTCGGCGACTCATCAAAGGAAAAATTACAAGAAGAAGTTGATGAATTTGCTGATTCTT ATTACTGGGATCTTGATCTCGCAGACATTAGACAGCTCTTCAACAACATAAATCCATCAGAAGATCTAAGAAGTATTGCC TACTACAAGAAAAAGTATTGCCCGAAGACAAAATGGTCCCGCTTTCAAGATTGCTGCATTTACTTCTACTCATTAAAGAA CTCTATAAATTCTGATTGGGAGTTCCTGTTGGAGACTTCAATAAAGAGATTGAGGCTTCAAGTTACTATGGGTGGAGGTG AAGTTAGCGAGAAACTTTCTTATGCCACCCATCTGGTAGTCCTGTCAGTACCTGGGTGTGACGTAGAATTTGATTCAATA CTGGAAAGCTTTGCAGCAGCAGAGAAACGTCGATTATGTAGCAAAAAGCTGCATGTTGTGGCTTATGAATGGTTAGAGGA CTCTTTGGAGAAGGACCAGAAATTGGATGAGGAAAAATACAACTTGAAGCCTGACGGGTTAGAAGAGTCAAATATTGAAA TGAGTGAGCATGAAATATCTGATACTTCCGAAAAGGATGGGAAGAGTATTAGCGAGGAACCTGCGGTAAAAAATGTGAGA ACGTCAGCAGCATCTGAGGTTGTTGGGAAACGAAAGAGAGGAAGACCCACTCTTGGAAACGCAAAAAGAGGACGAACTGT TGCCAGCCAAGCTCGACAAACGAGGGTAAAAGGTCGAACAAGGCCTGCTAAATTAGATCAAAGTGAACCAGAAAAAAGTG CATCCTCTGATGATACATCAAACAAAGATGCCATAGAGTCAAAACGAGGGGCCCAAGGAGTTCAAGGAAGCATAACCGGT TTAAGCCAATCTCGAAGAACACGGGCAAAGATGGGAGCCAAGCATGCCAAATTAGACGAAAACGAACTTGAACTCAGTGC TGCCTCAGAAAATGCACCTTCTAATGAAGCCACTGAATCAGATAGGGGGTTTCATGAAATTCACGAAACAGAGACAAAAG AAGATGATAAAAACAGCACGAAAGAAAAAGCAGAAGTTTTTGATGTATCTCAAGGGAACAATATCAATGGGATAGCGTCT ATGGAATTGGATGGCAGAGACGACTATCAGGACAGTGAAAAGGTCACGGGACATAGTGAGATATATAACTCGAAAGGAGA AGAAAAAATAGATGTTTCAGATAAGCCGGAAGTAACACTTGATCCTCTTCAAGCGATGTTGTTAAATATGATACCGAGCC TTGGAGTGAAATCTGAAGCATATCAATCTGCATCTGGAAGTGAGGTACCGGTAAGAATAGATCCAAGCATTGGAGTGAAG AAAACTGAGGCATCATCAAAACCTGCCCTCGAAGATGAGGTACCACCAGTAAGAGTAGATCCTGATGCAGGGCCTGTTCA AAAGAAGAAGAAAGTCAGTTACAAGGATGTTGCTGGCGAGCTGCTTAAGGATTGGTAA |
Microexon DNA seq | TTATGCT |
Microexon Amino Acid seq | LCY |
Microexon-tag DNA Seq | AATCAGGAAATTGCAAAGGCTGCAAGAGAGGGATTCGCCAGTGATAGACAGTTATGCTATGTTGCATTTGACATTCTTTATGTTGGAGACACTAGTGTTATCCATCAG |
Microexon-tag Amino Acid seq | NQEIAKAAREGFASDRQLCYVAFDILYVGDTSVIHQ |
Transcript ID | Ps.44482.1 |
Gene ID | Ps.44482 |
Gene Name | NA |
Pfam domain motif | DNA_ligase_A_M |
Motif E-value | 2.3e-26 |
Motif start | 24 |
Motif end | 171 |
Protein seq | >Ps.44482.1 MWNFLDHPEYEHAMSNVIMQNILVDRCILDGEMLVWDTSTNRFAEFGSNQEIAKAAREGFASDRQLCYVAFDILYVGDTS VIHQSLKERHELLRKVVKPLKGRLEILVPDGGINAHRSSGEPCWSVIVHNVEMVDKFFKATVENRDEGIVLKDLGSKWEP SDRSGKWLKLKPDYIHTGSDLDVLIIGGYYGSGRRGGEVAQFLVGLAEPSASNTYPRRFISFCRVGTGLSDDELDALVTK LKPYFRKNEYPKKTPSFYELTNHSKERPDVWIDSPEKSIILSITSDIRTVRSEVFAAPYSLRFPRIDRVRYDKPWHECLD LQSFVDLVNSSNGNTRGADYGSSQYNKPKRAKPSSKGDKKKAPIVPSHFLRTDVSGITEETPIFANMMFYFINVPPSHSL DLFRKMVVEHGGEFSMNRNDSVTHCIAAERKGIQFEAAKRRGDVIYYSWVLDCCLQKRLLHLQPKYFLHLGDSSKEKLQE EVDEFADSYYWDLDLADIRQLFNNINPSEDLRSIAYYKKKYCPKTKWSRFQDCCIYFYSLKNSINSDWEFLLETSIKRLR LQVTMGGGEVSEKLSYATHLVVLSVPGCDVEFDSILESFAAAEKRRLCSKKLHVVAYEWLEDSLEKDQKLDEEKYNLKPD GLEESNIEMSEHEISDTSEKDGKSISEEPAVKNVRTSAASEVVGKRKRGRPTLGNAKRGRTVASQARQTRVKGRTRPAKL DQSEPEKSASSDDTSNKDAIESKRGAQGVQGSITGLSQSRRTRAKMGAKHAKLDENELELSAASENAPSNEATESDRGFH EIHETETKEDDKNSTKEKAEVFDVSQGNNINGIASMELDGRDDYQDSEKVTGHSEIYNSKGEEKIDVSDKPEVTLDPLQA MLLNMIPSLGVKSEAYQSASGSEVPVRIDPSIGVKKTEASSKPALEDEVPPVRVDPDAGPVQKKKKVSYKDVAGELLKDW * |
CDS seq | >Ps.44482.1 ATGTGGAACTTTCTTGATCACCCTGAATATGAGCATGCAATGTCAAACGTCATCATGCAGAATATCTTGGTCGATAGGTG CATCCTTGATGGTGAAATGTTGGTCTGGGACACATCTACAAATCGTTTTGCCGAATTTGGGTCTAATCAGGAAATTGCAA AGGCTGCAAGAGAGGGATTCGCCAGTGATAGACAGTTATGCTATGTTGCATTTGACATTCTTTATGTTGGAGACACTAGT GTTATCCATCAGAGCTTGAAAGAGAGACATGAACTTCTTCGGAAAGTGGTAAAGCCTTTAAAGGGCCGTTTGGAAATATT AGTACCGGATGGTGGTATTAATGCTCATCGTTCTTCAGGGGAACCTTGCTGGTCTGTTATTGTGCATAATGTTGAAATGG TTGACAAGTTCTTCAAAGCCACTGTAGAGAATAGAGATGAAGGGATCGTATTGAAAGACCTTGGATCTAAATGGGAACCT AGTGATCGAAGTGGAAAGTGGTTAAAGTTGAAGCCTGATTACATACACACTGGTTCTGATCTGGATGTTCTGATTATAGG TGGGTATTATGGTTCTGGTCGTCGAGGAGGGGAGGTTGCTCAGTTTCTGGTGGGTCTTGCGGAACCTTCAGCCTCTAATA CATACCCCAGACGGTTTATATCATTTTGCAGAGTTGGTACTGGCCTTTCTGATGACGAGCTTGATGCATTGGTTACAAAA TTGAAGCCCTATTTTAGGAAGAATGAGTACCCAAAGAAGACACCGAGCTTTTATGAACTAACCAACCATTCAAAAGAGAG GCCAGATGTTTGGATTGATAGTCCTGAAAAATCAATCATATTGTCCATAACTAGTGATATCCGAACTGTCAGGTCTGAGG TATTTGCTGCACCCTACAGTTTGAGATTTCCTCGCATTGACAGGGTGAGATATGACAAACCTTGGCATGAGTGCCTTGAT CTGCAGTCTTTTGTGGACTTGGTGAACTCAAGTAATGGCAACACTAGGGGGGCAGATTATGGAAGCTCTCAATATAATAA ACCAAAGCGCGCCAAACCCTCGAGCAAGGGAGACAAGAAGAAGGCCCCTATTGTTCCTTCTCATTTCCTTCGCACAGATG TCTCCGGCATAACAGAAGAAACCCCCATATTTGCAAACATGATGTTTTATTTCATCAATGTACCCCCAAGCCATTCTCTG GATCTCTTTCGCAAAATGGTGGTTGAGCACGGAGGGGAGTTCTCGATGAACCGAAACGATTCAGTTACTCACTGCATTGC AGCAGAAAGAAAAGGTATCCAATTCGAGGCAGCAAAGCGTCGTGGAGACGTTATTTACTACTCATGGGTTCTGGATTGTT GCTTACAAAAGCGTCTTCTGCATTTGCAGCCGAAGTATTTCCTTCATCTCGGCGACTCATCAAAGGAAAAATTACAAGAA GAAGTTGATGAATTTGCTGATTCTTATTACTGGGATCTTGATCTCGCAGACATTAGACAGCTCTTCAACAACATAAATCC ATCAGAAGATCTAAGAAGTATTGCCTACTACAAGAAAAAGTATTGCCCGAAGACAAAATGGTCCCGCTTTCAAGATTGCT GCATTTACTTCTACTCATTAAAGAACTCTATAAATTCTGATTGGGAGTTCCTGTTGGAGACTTCAATAAAGAGATTGAGG CTTCAAGTTACTATGGGTGGAGGTGAAGTTAGCGAGAAACTTTCTTATGCCACCCATCTGGTAGTCCTGTCAGTACCTGG GTGTGACGTAGAATTTGATTCAATACTGGAAAGCTTTGCAGCAGCAGAGAAACGTCGATTATGTAGCAAAAAGCTGCATG TTGTGGCTTATGAATGGTTAGAGGACTCTTTGGAGAAGGACCAGAAATTGGATGAGGAAAAATACAACTTGAAGCCTGAC GGGTTAGAAGAGTCAAATATTGAAATGAGTGAGCATGAAATATCTGATACTTCCGAAAAGGATGGGAAGAGTATTAGCGA GGAACCTGCGGTAAAAAATGTGAGAACGTCAGCAGCATCTGAGGTTGTTGGGAAACGAAAGAGAGGAAGACCCACTCTTG GAAACGCAAAAAGAGGACGAACTGTTGCCAGCCAAGCTCGACAAACGAGGGTAAAAGGTCGAACAAGGCCTGCTAAATTA GATCAAAGTGAACCAGAAAAAAGTGCATCCTCTGATGATACATCAAACAAAGATGCCATAGAGTCAAAACGAGGGGCCCA AGGAGTTCAAGGAAGCATAACCGGTTTAAGCCAATCTCGAAGAACACGGGCAAAGATGGGAGCCAAGCATGCCAAATTAG ACGAAAACGAACTTGAACTCAGTGCTGCCTCAGAAAATGCACCTTCTAATGAAGCCACTGAATCAGATAGGGGGTTTCAT GAAATTCACGAAACAGAGACAAAAGAAGATGATAAAAACAGCACGAAAGAAAAAGCAGAAGTTTTTGATGTATCTCAAGG GAACAATATCAATGGGATAGCGTCTATGGAATTGGATGGCAGAGACGACTATCAGGACAGTGAAAAGGTCACGGGACATA GTGAGATATATAACTCGAAAGGAGAAGAAAAAATAGATGTTTCAGATAAGCCGGAAGTAACACTTGATCCTCTTCAAGCG ATGTTGTTAAATATGATACCGAGCCTTGGAGTGAAATCTGAAGCATATCAATCTGCATCTGGAAGTGAGGTACCGGTAAG AATAGATCCAAGCATTGGAGTGAAGAAAACTGAGGCATCATCAAAACCTGCCCTCGAAGATGAGGTACCACCAGTAAGAG TAGATCCTGATGCAGGGCCTGTTCAAAAGAAGAAGAAAGTCAGTTACAAGGATGTTGCTGGCGAGCTGCTTAAGGATTGG TAA |