
Microexon ID | Ps_NC_039360.1:217303442-217303448:- |
Species | Papaver somniferum | Coordinates | NC_039360.1:217303442..217303448 |
Microexon Cluster ID | MEP13 |
Size | 7 |
Phase | 0 |
Pfam Domain Motif | DNA_ligase_A_M |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 13,38,7,50 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | AAYCAGGAAATWGCMAAGGCWGCAARRGAKGGRYTKGMSASTGATMGACAGTTRTGYTATGTTGCWTTTGAYRTTCTKTATGYTGGAGAYACYAGYGTYATYCAYCAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTATGCT |
Microexon Amino Acid seq | LCY |
Microexon-tag DNA Seq | AATCAAGAAATTGCAAAGGCTGCAAGAGAGGGATTCGCCAGTGATCGACAGTTATGCTATGTTGCATTTGACATTCTTTATGTTGGAGATACTAGTGTTATCCATCAG |
Microexon-tag Amino Acid Seq | NQEIAKAAREGFASDRQLCYVAFDILYVGDTSVIHQ |
Microexon-tag spanning region | 217303207-217303686 |
Microexon-tag prediction score | 0.9755 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026602278.1x |
Reference Transcript ID | XM_026602278.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026602278.1 |
Protein ID | XP_026458063.1 |
Gene ID | LOC113358662 |
Gene Name | NA |
Pfam domain motif | DNA_ligase_A_M |
Motif E-value | 4.9e-41 |
Motif start | 229 |
Motif end | 444 |
Protein seq | >XP_026458063.1 MSDQSAVKFSVLCSLFNWMQRSKTSSKKRSKFRKFLDNFCKTGDDYFASIRLILPSLDRERGSYGLKESVLANCLIDAVG LSKDSEDAKKLINWRKGGSKTGYNVGNFGLVAAEVLQRRQGMISGGLTIKELNNMLDRLASSENRGDKTAVLADLIQKTN AQEMKWIVMIILKDLKLGVSEKSIFQEFHPDAEDLFNVTCDLKLVCEKLKDRSQRHKRQDIEIGKAVRPQLALRISDATS AWKKLHGKEVVVECKFDGDRIQIHKSGPKINFFSRNFLDHPEYEHAMSNVITQNILVDRCILDGEMLVWDTSTNRFAEFG SNQEIAKAAREGFASDRQLCYVAFDILYVGDTSVIHQSLKERHELLRKVVKPLKGRLEILVPDGGINAHRSSGEPCWSVI AQNVEMVDKFFKATVENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIHTGSDLDVLIIGGYYGSGRRGGEVAQFLVGLA EPSASNTYPRRFISFCRVGTGLSDDELDALVTKLKPYFRKNEYPKKIPSFYELTNHSKERPDVWIDSPEKSIILSITSDI RTVRSEVFAAPYSLRFPRIDRVRYDKPWHECLDLQSFVDLVNSSNGNTRGADYGGSQYNKPKRAKPSSKGDKKKAPIVPS HFLRTDVSGVTEETPIFANMMFYFINVPPTHSLDLFRKMVVEHGGQFSMNLNDSVTHCIAAERKGIKFEAAKRRGDVIHY SWVLDCCLQKRLLHLQPKYFLHLGDSSKEKLQEEVDEFADSYYWDLDLADIRQLFNNINPSEDLRNIAYYKKKYCPKTKW SRFQDCCIYFYSLKNSINSDWEFPLETSIKRLRLEVTMGGGEVSEKLSYATHLVVLSVPGCDVEFDSILESFAAAEKHRL CSKKLHVVAYEWLEDSLEKGQKLDEEKYNLKPDGLEESNIEMSEHEISDTSEKDGKSISEEPAVKNVRTSAASEVVGKRT RGRPTLGNAKRGRTVASQARQTRVKGRTRPAKLDQSEPEKSASSDDTSNKDAIESKRGAQGVQGSITGLSQSRRTRAKMG AKHAKLDENELEVGAASENAPSNEATESDRGFHEIHETETKEDKNNTKEKAEVFDVSQGDNISGTGSMELDGRNDYQDSE KVTGHIEISNSKGEEKIDVSDKPEVTLDPLQAMLLNMIPSLGVKSEAYQSASGSEVPVRIDPSIEVKKTEASKPALEDEV PPVRVDPDAGPVKKKKKVSYKDVAGELLKDW* |
CDS seq | >XM_026602278.1 ATGAGTGATCAAAGTGCAGTGAAATTCAGCGTACTATGCAGTTTATTCAATTGGATGCAAAGAAGTAAAACATCATCAAA GAAACGATCAAAGTTCCGGAAATTTCTAGATAATTTCTGTAAAACTGGTGATGATTACTTCGCTTCAATACGATTAATAT TACCATCATTAGATAGAGAAAGAGGAAGTTACGGATTGAAAGAATCAGTACTTGCTAATTGTTTGATCGATGCCGTTGGT TTATCTAAAGATTCTGAAGATGCTAAGAAACTTATTAATTGGAGAAAAGGTGGGAGTAAAACTGGTTATAATGTTGGGAA TTTTGGTCTTGTTGCTGCTGAGGTACTGCAAAGAAGGCAAGGAATGATATCTGGTGGATTAACGATCAAGGAGTTAAATA ATATGCTTGATCGCTTAGCATCAAGTGAGAATAGAGGTGACAAGACTGCTGTACTTGCTGATCTTATACAGAAAACAAAT GCACAAGAAATGAAGTGGATTGTCATGATCATTCTAAAAGATCTAAAACTTGGAGTCAGTGAAAAGAGCATTTTCCAAGA ATTTCATCCAGATGCTGAAGACTTGTTTAATGTCACTTGTGACTTAAAACTAGTTTGTGAAAAGCTAAAGGACCGAAGTC AACGGCACAAGCGCCAGGACATAGAAATTGGAAAAGCTGTACGCCCTCAACTAGCTCTGAGAATTAGTGATGCAACTTCT GCATGGAAAAAGCTTCATGGAAAAGAAGTCGTGGTTGAGTGCAAATTTGATGGCGACCGCATTCAAATTCATAAAAGTGG ACCTAAGATAAACTTCTTCTCAAGGAACTTTCTTGATCACCCTGAATATGAGCATGCAATGTCAAATGTCATCACACAAA ATATCTTGGTTGATAGGTGCATCCTTGATGGTGAAATGTTGGTCTGGGACACATCTACAAATCGTTTTGCCGAATTTGGG TCTAATCAAGAAATTGCAAAGGCTGCAAGAGAGGGATTCGCCAGTGATCGACAGTTATGCTATGTTGCATTTGACATTCT TTATGTTGGAGATACTAGTGTTATCCATCAGAGCTTGAAAGAGAGACACGAACTTCTTCGGAAAGTGGTAAAACCTTTAA AGGGCCGTTTGGAAATATTAGTACCGGATGGTGGTATTAATGCTCATCGTTCTTCAGGGGAACCTTGCTGGTCTGTTATT GCGCAGAATGTGGAAATGGTTGACAAATTCTTCAAAGCTACCGTGGAGAACAGAGATGAAGGTATTGTATTGAAAGACCT TGGATCTAAATGGGAACCTAGTGATCGAAGTGGAAAGTGGTTAAAGTTGAAGCCTGATTACATACACACTGGTTCTGATC TGGATGTTCTGATTATAGGTGGATATTATGGTTCTGGTCGTCGAGGAGGGGAGGTTGCTCAGTTTTTGGTGGGTCTTGCG GAACCTTCAGCCTCTAATACCTACCCCAGACGGTTTATATCATTTTGCAGAGTTGGTACTGGCCTTTCTGATGACGAGCT TGATGCGTTGGTTACAAAATTGAAGCCCTATTTTAGGAAGAATGAGTACCCAAAGAAGATACCGAGCTTTTATGAACTAA CCAACCATTCAAAAGAGAGGCCAGATGTTTGGATTGATAGTCCTGAAAAGTCAATCATATTGTCCATAACTAGTGATATC CGAACTGTCAGGTCTGAGGTATTTGCTGCACCCTACAGTTTGAGATTTCCTCGCATTGACAGGGTGAGATATGACAAACC TTGGCATGAGTGCCTTGATCTGCAGTCTTTTGTGGACTTGGTGAACTCAAGTAATGGCAACACTAGGGGGGCAGATTATG GAGGCTCTCAATATAATAAACCAAAGCGTGCCAAACCCTCGAGCAAGGGAGACAAGAAGAAGGCCCCTATTGTCCCTTCT CATTTCCTCCGGACAGATGTCTCCGGCGTAACAGAAGAAACCCCCATATTTGCAAACATGATGTTTTATTTCATCAATGT ACCCCCAACCCATTCTCTGGATCTCTTTCGCAAAATGGTGGTTGAGCACGGAGGGCAGTTCTCGATGAACCTAAACGATT CAGTTACTCACTGCATTGCAGCAGAAAGAAAAGGTATCAAATTCGAGGCAGCAAAGCGTCGTGGAGACGTTATTCACTAC TCATGGGTTCTAGATTGTTGCTTACAAAAGCGTCTTCTGCATTTGCAGCCGAAGTACTTCCTTCATCTCGGTGACTCATC AAAGGAAAAATTACAAGAAGAAGTTGATGAATTTGCTGATTCTTATTACTGGGATCTTGATCTTGCAGATATTAGACAGC TCTTCAACAACATAAATCCATCAGAAGATCTAAGAAATATTGCCTACTACAAGAAAAAGTATTGCCCGAAGACAAAATGG TCCCGCTTTCAAGATTGCTGCATTTACTTCTACTCATTAAAGAACTCTATAAATTCTGACTGGGAGTTCCCGTTGGAGAC TTCAATAAAGAGATTGAGACTTGAAGTTACTATGGGTGGAGGTGAAGTTAGCGAGAAACTTTCTTATGCGACCCATCTGG TAGTCCTGTCAGTACCCGGGTGTGACGTAGAATTTGATTCAATACTGGAAAGCTTTGCAGCAGCAGAGAAACATCGATTA TGTAGCAAAAAGCTGCATGTTGTGGCTTACGAATGGTTAGAGGACTCTTTGGAGAAGGGCCAGAAATTGGACGAGGAAAA ATACAACTTGAAGCCTGACGGGTTAGAAGAGTCAAATATTGAAATGAGTGAGCATGAAATATCTGATACTTCCGAAAAGG ATGGGAAGAGTATTAGCGAGGAACCTGCGGTAAAAAATGTGAGAACGTCAGCAGCATCTGAGGTTGTTGGGAAACGAACG AGAGGAAGACCCACTCTTGGAAACGCAAAAAGAGGACGAACTGTTGCCAGCCAAGCTCGACAAACGAGGGTAAAAGGTCG AACAAGGCCTGCTAAATTAGATCAAAGTGAACCAGAAAAAAGTGCTTCCTCTGATGATACATCAAACAAAGATGCCATAG AGTCAAAACGAGGGGCCCAAGGAGTTCAAGGAAGCATAACCGGTTTAAGCCAATCTCGAAGAACACGGGCAAAGATGGGA GCCAAGCATGCCAAATTAGATGAAAACGAACTTGAAGTCGGTGCTGCCTCAGAAAATGCACCTTCTAACGAAGCCACTGA ATCAGATAGGGGGTTTCATGAAATTCACGAAACAGAGACAAAAGAAGATAAAAACAACACGAAAGAAAAAGCAGAAGTTT TTGATGTATCACAAGGGGACAATATTAGTGGGACAGGGTCTATGGAATTGGATGGCAGAAATGACTATCAGGACAGTGAA AAGGTCACGGGACATATTGAGATATCTAACTCGAAAGGAGAAGAAAAAATAGATGTTTCAGATAAGCCGGAAGTAACACT TGATCCTCTTCAAGCGATGTTGTTAAATATGATACCAAGCCTTGGAGTGAAATCTGAAGCATATCAATCTGCATCTGGAA GTGAGGTACCGGTAAGAATAGATCCAAGCATTGAAGTGAAGAAAACTGAGGCATCAAAACCTGCTCTCGAAGATGAGGTA CCACCAGTAAGAGTAGATCCTGATGCAGGGCCTGTTAAAAAGAAGAAGAAAGTCAGTTACAAGGATGTCGCTGGCGAGCT GCTTAAGGATTGGTAA |
Microexon DNA seq | TTATGCT |
Microexon Amino Acid seq | LCY |
Microexon-tag DNA Seq | AATCAAGAAATTGCAAAGGCTGCAAGAGAGGGATTCGCCAGTGATCGACAGTTATGCTATGTTGCATTTGACATTCTTTATGTTGGAGATACTAGTGTTATCCATCAG |
Microexon-tag Amino Acid seq | NQEIAKAAREGFASDRQLCYVAFDILYVGDTSVIHQ |
Transcript ID | XM_026602278.1 |
Gene ID | Ps.21729 |
Gene Name | NA |
Pfam domain motif | DNA_ligase_A_M |
Motif E-value | 4.9e-41 |
Motif start | 229 |
Motif end | 444 |
Protein seq | >XM_026602278.1 MSDQSAVKFSVLCSLFNWMQRSKTSSKKRSKFRKFLDNFCKTGDDYFASIRLILPSLDRERGSYGLKESVLANCLIDAVG LSKDSEDAKKLINWRKGGSKTGYNVGNFGLVAAEVLQRRQGMISGGLTIKELNNMLDRLASSENRGDKTAVLADLIQKTN AQEMKWIVMIILKDLKLGVSEKSIFQEFHPDAEDLFNVTCDLKLVCEKLKDRSQRHKRQDIEIGKAVRPQLALRISDATS AWKKLHGKEVVVECKFDGDRIQIHKSGPKINFFSRNFLDHPEYEHAMSNVITQNILVDRCILDGEMLVWDTSTNRFAEFG SNQEIAKAAREGFASDRQLCYVAFDILYVGDTSVIHQSLKERHELLRKVVKPLKGRLEILVPDGGINAHRSSGEPCWSVI AQNVEMVDKFFKATVENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIHTGSDLDVLIIGGYYGSGRRGGEVAQFLVGLA EPSASNTYPRRFISFCRVGTGLSDDELDALVTKLKPYFRKNEYPKKIPSFYELTNHSKERPDVWIDSPEKSIILSITSDI RTVRSEVFAAPYSLRFPRIDRVRYDKPWHECLDLQSFVDLVNSSNGNTRGADYGGSQYNKPKRAKPSSKGDKKKAPIVPS HFLRTDVSGVTEETPIFANMMFYFINVPPTHSLDLFRKMVVEHGGQFSMNLNDSVTHCIAAERKGIKFEAAKRRGDVIHY SWVLDCCLQKRLLHLQPKYFLHLGDSSKEKLQEEVDEFADSYYWDLDLADIRQLFNNINPSEDLRNIAYYKKKYCPKTKW SRFQDCCIYFYSLKNSINSDWEFPLETSIKRLRLEVTMGGGEVSEKLSYATHLVVLSVPGCDVEFDSILESFAAAEKHRL CSKKLHVVAYEWLEDSLEKGQKLDEEKYNLKPDGLEESNIEMSEHEISDTSEKDGKSISEEPAVKNVRTSAASEVVGKRT RGRPTLGNAKRGRTVASQARQTRVKGRTRPAKLDQSEPEKSASSDDTSNKDAIESKRGAQGVQGSITGLSQSRRTRAKMG AKHAKLDENELEVGAASENAPSNEATESDRGFHEIHETETKEDKNNTKEKAEVFDVSQGDNISGTGSMELDGRNDYQDSE KVTGHIEISNSKGEEKIDVSDKPEVTLDPLQAMLLNMIPSLGVKSEAYQSASGSEVPVRIDPSIEVKKTEASKPALEDEV PPVRVDPDAGPVKKKKKVSYKDVAGELLKDW* |
CDS seq | >XM_026602278.1 ATGAGTGATCAAAGTGCAGTGAAATTCAGCGTACTATGCAGTTTATTCAATTGGATGCAAAGAAGTAAAACATCATCAAA GAAACGATCAAAGTTCCGGAAATTTCTAGATAATTTCTGTAAAACTGGTGATGATTACTTCGCTTCAATACGATTAATAT TACCATCATTAGATAGAGAAAGAGGAAGTTACGGATTGAAAGAATCAGTACTTGCTAATTGTTTGATCGATGCCGTTGGT TTATCTAAAGATTCTGAAGATGCTAAGAAACTTATTAATTGGAGAAAAGGTGGGAGTAAAACTGGTTATAATGTTGGGAA TTTTGGTCTTGTTGCTGCTGAGGTACTGCAAAGAAGGCAAGGAATGATATCTGGTGGATTAACGATCAAGGAGTTAAATA ATATGCTTGATCGCTTAGCATCAAGTGAGAATAGAGGTGACAAGACTGCTGTACTTGCTGATCTTATACAGAAAACAAAT GCACAAGAAATGAAGTGGATTGTCATGATCATTCTAAAAGATCTAAAACTTGGAGTCAGTGAAAAGAGCATTTTCCAAGA ATTTCATCCAGATGCTGAAGACTTGTTTAATGTCACTTGTGACTTAAAACTAGTTTGTGAAAAGCTAAAGGACCGAAGTC AACGGCACAAGCGCCAGGACATAGAAATTGGAAAAGCTGTACGCCCTCAACTAGCTCTGAGAATTAGTGATGCAACTTCT GCATGGAAAAAGCTTCATGGAAAAGAAGTCGTGGTTGAGTGCAAATTTGATGGCGACCGCATTCAAATTCATAAAAGTGG ACCTAAGATAAACTTCTTCTCAAGGAACTTTCTTGATCACCCTGAATATGAGCATGCAATGTCAAATGTCATCACACAAA ATATCTTGGTTGATAGGTGCATCCTTGATGGTGAAATGTTGGTCTGGGACACATCTACAAATCGTTTTGCCGAATTTGGG TCTAATCAAGAAATTGCAAAGGCTGCAAGAGAGGGATTCGCCAGTGATCGACAGTTATGCTATGTTGCATTTGACATTCT TTATGTTGGAGATACTAGTGTTATCCATCAGAGCTTGAAAGAGAGACACGAACTTCTTCGGAAAGTGGTAAAACCTTTAA AGGGCCGTTTGGAAATATTAGTACCGGATGGTGGTATTAATGCTCATCGTTCTTCAGGGGAACCTTGCTGGTCTGTTATT GCGCAGAATGTGGAAATGGTTGACAAATTCTTCAAAGCTACCGTGGAGAACAGAGATGAAGGTATTGTATTGAAAGACCT TGGATCTAAATGGGAACCTAGTGATCGAAGTGGAAAGTGGTTAAAGTTGAAGCCTGATTACATACACACTGGTTCTGATC TGGATGTTCTGATTATAGGTGGATATTATGGTTCTGGTCGTCGAGGAGGGGAGGTTGCTCAGTTTTTGGTGGGTCTTGCG GAACCTTCAGCCTCTAATACCTACCCCAGACGGTTTATATCATTTTGCAGAGTTGGTACTGGCCTTTCTGATGACGAGCT TGATGCGTTGGTTACAAAATTGAAGCCCTATTTTAGGAAGAATGAGTACCCAAAGAAGATACCGAGCTTTTATGAACTAA CCAACCATTCAAAAGAGAGGCCAGATGTTTGGATTGATAGTCCTGAAAAGTCAATCATATTGTCCATAACTAGTGATATC CGAACTGTCAGGTCTGAGGTATTTGCTGCACCCTACAGTTTGAGATTTCCTCGCATTGACAGGGTGAGATATGACAAACC TTGGCATGAGTGCCTTGATCTGCAGTCTTTTGTGGACTTGGTGAACTCAAGTAATGGCAACACTAGGGGGGCAGATTATG GAGGCTCTCAATATAATAAACCAAAGCGTGCCAAACCCTCGAGCAAGGGAGACAAGAAGAAGGCCCCTATTGTCCCTTCT CATTTCCTCCGGACAGATGTCTCCGGCGTAACAGAAGAAACCCCCATATTTGCAAACATGATGTTTTATTTCATCAATGT ACCCCCAACCCATTCTCTGGATCTCTTTCGCAAAATGGTGGTTGAGCACGGAGGGCAGTTCTCGATGAACCTAAACGATT CAGTTACTCACTGCATTGCAGCAGAAAGAAAAGGTATCAAATTCGAGGCAGCAAAGCGTCGTGGAGACGTTATTCACTAC TCATGGGTTCTAGATTGTTGCTTACAAAAGCGTCTTCTGCATTTGCAGCCGAAGTACTTCCTTCATCTCGGTGACTCATC AAAGGAAAAATTACAAGAAGAAGTTGATGAATTTGCTGATTCTTATTACTGGGATCTTGATCTTGCAGATATTAGACAGC TCTTCAACAACATAAATCCATCAGAAGATCTAAGAAATATTGCCTACTACAAGAAAAAGTATTGCCCGAAGACAAAATGG TCCCGCTTTCAAGATTGCTGCATTTACTTCTACTCATTAAAGAACTCTATAAATTCTGACTGGGAGTTCCCGTTGGAGAC TTCAATAAAGAGATTGAGACTTGAAGTTACTATGGGTGGAGGTGAAGTTAGCGAGAAACTTTCTTATGCGACCCATCTGG TAGTCCTGTCAGTACCCGGGTGTGACGTAGAATTTGATTCAATACTGGAAAGCTTTGCAGCAGCAGAGAAACATCGATTA TGTAGCAAAAAGCTGCATGTTGTGGCTTACGAATGGTTAGAGGACTCTTTGGAGAAGGGCCAGAAATTGGACGAGGAAAA ATACAACTTGAAGCCTGACGGGTTAGAAGAGTCAAATATTGAAATGAGTGAGCATGAAATATCTGATACTTCCGAAAAGG ATGGGAAGAGTATTAGCGAGGAACCTGCGGTAAAAAATGTGAGAACGTCAGCAGCATCTGAGGTTGTTGGGAAACGAACG AGAGGAAGACCCACTCTTGGAAACGCAAAAAGAGGACGAACTGTTGCCAGCCAAGCTCGACAAACGAGGGTAAAAGGTCG AACAAGGCCTGCTAAATTAGATCAAAGTGAACCAGAAAAAAGTGCTTCCTCTGATGATACATCAAACAAAGATGCCATAG AGTCAAAACGAGGGGCCCAAGGAGTTCAAGGAAGCATAACCGGTTTAAGCCAATCTCGAAGAACACGGGCAAAGATGGGA GCCAAGCATGCCAAATTAGATGAAAACGAACTTGAAGTCGGTGCTGCCTCAGAAAATGCACCTTCTAACGAAGCCACTGA ATCAGATAGGGGGTTTCATGAAATTCACGAAACAGAGACAAAAGAAGATAAAAACAACACGAAAGAAAAAGCAGAAGTTT TTGATGTATCACAAGGGGACAATATTAGTGGGACAGGGTCTATGGAATTGGATGGCAGAAATGACTATCAGGACAGTGAA AAGGTCACGGGACATATTGAGATATCTAACTCGAAAGGAGAAGAAAAAATAGATGTTTCAGATAAGCCGGAAGTAACACT TGATCCTCTTCAAGCGATGTTGTTAAATATGATACCAAGCCTTGGAGTGAAATCTGAAGCATATCAATCTGCATCTGGAA GTGAGGTACCGGTAAGAATAGATCCAAGCATTGAAGTGAAGAAAACTGAGGCATCAAAACCTGCTCTCGAAGATGAGGTA CCACCAGTAAGAGTAGATCCTGATGCAGGGCCTGTTAAAAAGAAGAAGAAAGTCAGTTACAAGGATGTCGCTGGCGAGCT GCTTAAGGATTGGTAA |