| Microexon ID | Pp_14:4075744-4075750:+ |
| Species | Physcomitrium patens | Coordinates | 14:4075744..4075750 |
| Microexon Cluster ID | MEP13 |
| Size | 7 |
| Phase | 0 |
| Pfam Domain Motif | DNA_ligase_A_M |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 13,38,7,50 |
| Microexon location in the Microexon-tag | 3 |
| Microexon-tag DNA Seq | AAYCAGGAAATWGCMAAGGCWGCAARRGAKGGRYTKGMSASTGATMGACAGTTRTGYTATGTTGCWTTTGAYRTTCTKTATGYTGGAGAYACYAGYGTYATYCAYCAR |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
Pp_14:4075744-4075750:+ does not have available information here.
| Transcript ID | Pp3c14_5920V3.1 |
| Protein ID | Pp3c14_5920V3.1 |
| Gene ID | Pp3c14_5920 |
| Gene Name | NA |
| Pfam domain motif | DNA_ligase_A_M |
| Motif E-value | 7.3e-42 |
| Motif start | 229 |
| Motif end | 445 |
| Protein seq | >Pp3c14_5920V3.1 MKRMEETVEFGVLCSMFEAIVRCKKGALKRKHVRTFLEHVYNGQEHFSAMRLILPDLDKERANYGLREAVLAKFLADALG LSKESEDAKKLINWRKGGQRAGSNAGNFSMVASEVLCRRQKTAPGGLMIKEVNDLLDRLAAAQDKEEKTAVLAELINKTN AQEMRWIIMIILKDLKLGISEKTVFSEFHPDAEDYFNVTCDLKLVCEKLRDRSIRYKRQDIEVGKAVRPQLAARAANVED AWKKMRGKDVVVECKFDGDRIQVHKNGNNLNFWSRTFNDHPEFKEAIGDVLCQRIIPEKCILDGEMLVWDRVSQRFAEFG SNRGVAKAAKDGLDSDLQICYVAFDILYDGDSSVIHRPLRERQRLLQNAIRPLSGRLEVLIPAAGGLNAKHAVGDPRWSI LATSPEEVEQFFQETIDNREEGVVLKDLDSKWEPSDRSGKWLKLKPDYVHSESDLDALIIGGYFGTGRRGGEVAQFLLGL AEPSEVGGYPTKFRSFCRVGTGLTDDEAEQLVHKLKPHFRRNHKSTKPPSCYVLTNSSKERPDVWIERPEKSVILQITSD IRTIRSEVFATPYSLRFPRIQRIRYDKPWYDCLDVQTLVDTVHAKSQNDGQAEGGNQFKYRARRAKQEKPERASLVPSHM LVTDVSHVKQATRIFKGLVFYVANTSSEYPVEKIHKLVVENGGTFSMNLSSTVTHAVAFEKKGLKYQASFMNGDVIHLSW LLDCMAQKVLLVVSPKYYLNMSDATKERLKGEVDEFGDFYCNEVDETDLTQIFENIDVNKQYHDIDRVNYYIKKYSPSPT WCLFSGCCVFFLRPLHSANENTLQVANLTLRRLALEVEMHEGTVSDKLTRSITHVVMYVPTESPVSFQIILRSASSEERR LLLSKRVKVVSHRWIEDSVNRSIYRHPADEEYDLRTGEVLLSDEEEEELVSKTSVPIKADSMVPITPDKRVVPRSLRKPA TRRRALNLGRPSRRSKGTEEELPRVEAQKSGKEEHVEDDRAPTEITNKGTRNDPKAVEPFQLDDSASRTPEKRVLRVTRS RKKDKPSSGNERLPLKRRLIHDEGEASLTQPSDKALTGAEPFIPRMSTRLAEKRKAFESKREADTYKLECTAADLREEDQ EEPVEASEFEGLQNTSSLKEPTGRDDSRLHFNDFDHQSPAIDDMINTLLPNYASSQQANLSQQTNRESALPSRSNSFFIK PTLAPQPTQGVLGSYSRPYLPSHCASEALQPVPDAPDNSDLFSSVHRLASSQDHLTGTVTVESSSQGLATYLPPTNNPEK KKRSFKDLVNQMLNGN* |
| CDS seq | >Pp3c14_5920V3.1 ATGAAGAGGATGGAGGAAACTGTGGAGTTCGGAGTATTGTGTAGCATGTTTGAGGCCATCGTTAGGTGTAAGAAGGGAGC TCTGAAGCGGAAACATGTGCGGACGTTTTTGGAGCATGTTTACAATGGCCAAGAGCATTTTAGCGCTATGCGTTTGATTC TTCCCGACTTGGATAAAGAGCGTGCCAACTATGGACTCCGCGAGGCTGTGTTGGCCAAATTCTTAGCCGATGCTCTGGGG CTGTCTAAAGAATCTGAGGACGCTAAGAAACTTATCAATTGGCGTAAAGGAGGCCAAAGAGCCGGCAGCAATGCCGGCAA TTTCTCTATGGTTGCGTCTGAGGTGCTCTGCAGGAGGCAGAAAACAGCACCTGGTGGTCTAATGATTAAAGAGGTCAATG ATCTTCTCGATCGCTTAGCGGCAGCACAAGACAAGGAAGAGAAAACAGCTGTGCTAGCTGAGCTCATCAACAAGACAAAT GCTCAGGAAATGAGGTGGATTATTATGATTATTCTGAAAGATTTGAAACTCGGGATTAGTGAGAAGACAGTTTTCAGCGA GTTTCATCCCGACGCGGAAGATTATTTCAATGTCACATGCGATCTGAAGTTGGTTTGTGAAAAGCTTCGTGATCGCAGCA TACGTTACAAGCGCCAGGATATCGAAGTGGGGAAGGCAGTGCGACCACAATTAGCCGCAAGGGCTGCCAATGTCGAAGAT GCCTGGAAGAAGATGCGAGGCAAAGACGTTGTGGTAGAATGCAAGTTTGATGGAGACCGTATTCAAGTGCACAAAAATGG AAATAATCTGAACTTCTGGTCAAGGACGTTTAATGACCATCCAGAGTTCAAGGAGGCTATTGGTGACGTATTGTGTCAAC GTATCATTCCCGAGAAGTGTATACTTGACGGAGAGATGTTGGTTTGGGATCGAGTGTCGCAAAGATTTGCTGAGTTTGGC TCTAATCGTGGAGTTGCAAAGGCTGCTAAGGATGGCTTGGATTCTGATCTTCAGATTTGTTATGTTGCATTCGATATTCT GTATGATGGTGACAGCAGTGTTATCCATCGTCCGTTGCGTGAACGGCAACGGCTCCTTCAGAACGCTATTCGTCCTCTCA GTGGCCGTCTGGAGGTTCTTATACCTGCAGCCGGAGGGCTTAATGCAAAGCATGCTGTTGGAGATCCGAGGTGGTCAATC TTGGCCACAAGTCCCGAGGAGGTGGAACAGTTTTTTCAAGAGACGATCGACAATAGGGAGGAAGGGGTTGTGTTAAAAGA CCTAGATTCCAAATGGGAGCCCAGTGATCGTAGTGGAAAATGGCTTAAACTCAAGCCTGATTACGTTCACTCTGAATCTG ACCTTGATGCGCTGATAATAGGTGGTTATTTTGGAACTGGACGGCGTGGTGGTGAGGTTGCTCAATTTTTATTGGGATTG GCTGAGCCGTCAGAAGTGGGTGGCTACCCTACAAAATTTCGTTCCTTCTGCAGAGTGGGTACAGGCCTCACTGATGATGA GGCTGAGCAGTTAGTGCACAAGCTCAAACCCCACTTCAGGAGGAATCATAAAAGCACCAAACCACCGAGCTGTTATGTGC TGACTAACTCATCCAAAGAGCGGCCTGATGTCTGGATTGAACGACCTGAAAAGTCCGTAATACTTCAAATCACAAGTGAT ATCCGAACCATACGCTCTGAGGTATTTGCAACGCCGTATAGTCTACGGTTTCCTCGAATCCAAAGAATTCGATATGATAA ACCTTGGTATGACTGCCTCGATGTTCAGACATTAGTAGATACGGTACATGCAAAGAGCCAGAACGATGGTCAAGCGGAAG GTGGGAATCAATTCAAATATCGAGCAAGACGGGCCAAACAGGAAAAGCCTGAACGAGCATCATTGGTCCCCTCCCACATG TTGGTAACAGACGTATCGCATGTAAAGCAAGCCACTCGCATCTTCAAGGGCCTTGTCTTCTACGTTGCCAACACTTCCAG TGAGTACCCAGTTGAGAAAATTCACAAATTGGTTGTAGAGAATGGAGGCACCTTCTCTATGAACTTGAGCAGTACTGTTA CTCACGCGGTCGCATTCGAAAAGAAAGGACTCAAGTATCAGGCATCTTTTATGAATGGGGATGTCATTCATCTATCATGG CTTTTAGACTGCATGGCTCAGAAAGTACTCCTTGTAGTAAGCCCCAAGTATTACTTGAATATGTCAGATGCCACAAAGGA AAGACTGAAAGGTGAAGTTGACGAATTTGGAGATTTTTACTGCAACGAAGTTGATGAAACTGACCTTACACAGATCTTCG AAAACATAGATGTGAACAAGCAGTACCACGACATTGACAGAGTGAATTACTACATCAAGAAATATTCCCCATCTCCAACT TGGTGCCTTTTCTCCGGCTGCTGCGTCTTCTTTCTCCGTCCTCTTCACTCCGCGAATGAAAATACTCTACAGGTGGCAAA CCTAACATTGAGAAGACTTGCACTCGAGGTGGAGATGCACGAAGGCACCGTTTCTGACAAATTGACGCGTAGCATCACAC ACGTTGTGATGTATGTACCTACGGAAAGTCCCGTATCGTTCCAGATTATATTACGAAGTGCGTCATCGGAGGAAAGAAGG CTGCTATTATCGAAGCGGGTCAAAGTTGTAAGCCATCGCTGGATAGAGGATTCTGTTAACAGAAGTATCTACCGTCACCC CGCAGACGAAGAGTATGATCTCAGGACTGGAGAAGTGCTTTTGTCCGATGAGGAAGAAGAAGAGCTGGTGTCAAAAACTT CAGTCCCCATAAAGGCTGACTCGATGGTACCCATCACCCCAGACAAGAGGGTTGTACCTAGATCTCTTCGAAAACCAGCT ACGCGGAGACGAGCCCTGAACCTTGGAAGGCCTAGTAGAAGATCCAAAGGAACAGAGGAGGAACTTCCAAGAGTAGAGGC CCAAAAGTCGGGCAAAGAAGAGCACGTAGAGGATGACAGAGCACCAACAGAAATAACCAATAAGGGAACCAGGAATGATC CGAAGGCAGTGGAACCTTTTCAATTAGATGATTCTGCTTCTCGTACACCAGAAAAGAGAGTTCTTAGAGTTACTCGAAGC AGGAAAAAAGACAAACCATCATCTGGGAATGAGCGCCTACCTTTAAAACGACGTCTCATTCATGATGAAGGTGAGGCATC TCTGACCCAACCTTCAGACAAGGCACTCACAGGAGCGGAACCTTTCATACCAAGAATGTCGACCAGATTGGCTGAGAAAA GAAAAGCATTCGAAAGCAAGAGAGAAGCCGACACATATAAGCTAGAATGTACTGCAGCGGATCTTCGTGAGGAAGACCAA GAAGAGCCCGTGGAAGCTTCAGAATTCGAGGGGTTGCAGAACACCAGTTCTTTGAAAGAGCCAACTGGAAGGGACGACAG CAGATTACATTTCAACGATTTCGACCATCAAAGCCCAGCCATTGATGATATGATCAATACTCTACTTCCAAATTACGCCT CATCACAACAGGCTAACTTATCTCAACAAACGAACAGAGAGAGTGCCTTGCCCTCAAGGTCGAACTCATTTTTTATCAAA CCGACGTTGGCCCCACAACCCACTCAGGGAGTTCTAGGTAGCTACTCTCGACCATATCTCCCTTCACATTGTGCATCTGA AGCCCTCCAGCCGGTACCAGATGCTCCAGATAACTCTGATTTATTTTCATCAGTGCATCGTTTGGCAAGTTCACAAGACC ACTTGACTGGGACTGTGACGGTTGAATCATCCTCACAGGGGTTGGCAACTTATCTACCTCCGACCAACAACCCTGAGAAG AAGAAAAGAAGCTTTAAGGATCTGGTCAACCAGATGCTCAACGGTAACTGA |
| Microexon DNA seq | ATTTGTT |
| Microexon Amino Acid seq | ICY |
| Microexon-tag DNA Seq | AATCGTGGAGTTGCAAAGGCTGCTAAGGATGGCTTGGATTCTGATCTTCAGATTTGTTATGTTGCATTCGATATTCTGTATGATGGTGACAGCAGTGTTATCCATCGT |
| Microexon-tag Amino Acid seq | NRGVAKAAKDGLDSDLQICYVAFDILYDGDSSVIHR |
| Transcript ID | Pp3c14_5920V3.1 |
| Gene ID | Pp.5522 |
| Gene Name | NA |
| Pfam domain motif | DNA_ligase_A_M |
| Motif E-value | 7.3e-42 |
| Motif start | 229 |
| Motif end | 445 |
| Protein seq | >Pp3c14_5920V3.1 MKRMEETVEFGVLCSMFEAIVRCKKGALKRKHVRTFLEHVYNGQEHFSAMRLILPDLDKERANYGLREAVLAKFLADALG LSKESEDAKKLINWRKGGQRAGSNAGNFSMVASEVLCRRQKTAPGGLMIKEVNDLLDRLAAAQDKEEKTAVLAELINKTN AQEMRWIIMIILKDLKLGISEKTVFSEFHPDAEDYFNVTCDLKLVCEKLRDRSIRYKRQDIEVGKAVRPQLAARAANVED AWKKMRGKDVVVECKFDGDRIQVHKNGNNLNFWSRTFNDHPEFKEAIGDVLCQRIIPEKCILDGEMLVWDRVSQRFAEFG SNRGVAKAAKDGLDSDLQICYVAFDILYDGDSSVIHRPLRERQRLLQNAIRPLSGRLEVLIPAAGGLNAKHAVGDPRWSI LATSPEEVEQFFQETIDNREEGVVLKDLDSKWEPSDRSGKWLKLKPDYVHSESDLDALIIGGYFGTGRRGGEVAQFLLGL AEPSEVGGYPTKFRSFCRVGTGLTDDEAEQLVHKLKPHFRRNHKSTKPPSCYVLTNSSKERPDVWIERPEKSVILQITSD IRTIRSEVFATPYSLRFPRIQRIRYDKPWYDCLDVQTLVDTVHAKSQNDGQAEGGNQFKYRARRAKQEKPERASLVPSHM LVTDVSHVKQATRIFKGLVFYVANTSSEYPVEKIHKLVVENGGTFSMNLSSTVTHAVAFEKKGLKYQASFMNGDVIHLSW LLDCMAQKVLLVVSPKYYLNMSDATKERLKGEVDEFGDFYCNEVDETDLTQIFENIDVNKQYHDIDRVNYYIKKYSPSPT WCLFSGCCVFFLRPLHSANENTLQVANLTLRRLALEVEMHEGTVSDKLTRSITHVVMYVPTESPVSFQIILRSASSEERR LLLSKRVKVVSHRWIEDSVNRSIYRHPADEEYDLRTGEVLLSDEEEEELVSKTSVPIKADSMVPITPDKRVVPRSLRKPA TRRRALNLGRPSRRSKGTEEELPRVEAQKSGKEEHVEDDRAPTEITNKGTRNDPKAVEPFQLDDSASRTPEKRVLRVTRS RKKDKPSSGNERLPLKRRLIHDEGEASLTQPSDKALTGAEPFIPRMSTRLAEKRKAFESKREADTYKLECTAADLREEDQ EEPVEASEFEGLQNTSSLKEPTGRDDSRLHFNDFDHQSPAIDDMINTLLPNYASSQQANLSQQTNRESALPSRSNSFFIK PTLAPQPTQGVLGSYSRPYLPSHCASEALQPVPDAPDNSDLFSSVHRLASSQDHLTGTVTVESSSQGLATYLPPTNNPEK KKRSFKDLVNQMLNGN* |
| CDS seq | >Pp3c14_5920V3.1 ATGAAGAGGATGGAGGAAACTGTGGAGTTCGGAGTATTGTGTAGCATGTTTGAGGCCATCGTTAGGTGTAAGAAGGGAGC TCTGAAGCGGAAACATGTGCGGACGTTTTTGGAGCATGTTTACAATGGCCAAGAGCATTTTAGCGCTATGCGTTTGATTC TTCCCGACTTGGATAAAGAGCGTGCCAACTATGGACTCCGCGAGGCTGTGTTGGCCAAATTCTTAGCCGATGCTCTGGGG CTGTCTAAAGAATCTGAGGACGCTAAGAAACTTATCAATTGGCGTAAAGGAGGCCAAAGAGCCGGCAGCAATGCCGGCAA TTTCTCTATGGTTGCGTCTGAGGTGCTCTGCAGGAGGCAGAAAACAGCACCTGGTGGTCTAATGATTAAAGAGGTCAATG ATCTTCTCGATCGCTTAGCGGCAGCACAAGACAAGGAAGAGAAAACAGCTGTGCTAGCTGAGCTCATCAACAAGACAAAT GCTCAGGAAATGAGGTGGATTATTATGATTATTCTGAAAGATTTGAAACTCGGGATTAGTGAGAAGACAGTTTTCAGCGA GTTTCATCCCGACGCGGAAGATTATTTCAATGTCACATGCGATCTGAAGTTGGTTTGTGAAAAGCTTCGTGATCGCAGCA TACGTTACAAGCGCCAGGATATCGAAGTGGGGAAGGCAGTGCGACCACAATTAGCCGCAAGGGCTGCCAATGTCGAAGAT GCCTGGAAGAAGATGCGAGGCAAAGACGTTGTGGTAGAATGCAAGTTTGATGGAGACCGTATTCAAGTGCACAAAAATGG AAATAATCTGAACTTCTGGTCAAGGACGTTTAATGACCATCCAGAGTTCAAGGAGGCTATTGGTGACGTATTGTGTCAAC GTATCATTCCCGAGAAGTGTATACTTGACGGAGAGATGTTGGTTTGGGATCGAGTGTCGCAAAGATTTGCTGAGTTTGGC TCTAATCGTGGAGTTGCAAAGGCTGCTAAGGATGGCTTGGATTCTGATCTTCAGATTTGTTATGTTGCATTCGATATTCT GTATGATGGTGACAGCAGTGTTATCCATCGTCCGTTGCGTGAACGGCAACGGCTCCTTCAGAACGCTATTCGTCCTCTCA GTGGCCGTCTGGAGGTTCTTATACCTGCAGCCGGAGGGCTTAATGCAAAGCATGCTGTTGGAGATCCGAGGTGGTCAATC TTGGCCACAAGTCCCGAGGAGGTGGAACAGTTTTTTCAAGAGACGATCGACAATAGGGAGGAAGGGGTTGTGTTAAAAGA CCTAGATTCCAAATGGGAGCCCAGTGATCGTAGTGGAAAATGGCTTAAACTCAAGCCTGATTACGTTCACTCTGAATCTG ACCTTGATGCGCTGATAATAGGTGGTTATTTTGGAACTGGACGGCGTGGTGGTGAGGTTGCTCAATTTTTATTGGGATTG GCTGAGCCGTCAGAAGTGGGTGGCTACCCTACAAAATTTCGTTCCTTCTGCAGAGTGGGTACAGGCCTCACTGATGATGA GGCTGAGCAGTTAGTGCACAAGCTCAAACCCCACTTCAGGAGGAATCATAAAAGCACCAAACCACCGAGCTGTTATGTGC TGACTAACTCATCCAAAGAGCGGCCTGATGTCTGGATTGAACGACCTGAAAAGTCCGTAATACTTCAAATCACAAGTGAT ATCCGAACCATACGCTCTGAGGTATTTGCAACGCCGTATAGTCTACGGTTTCCTCGAATCCAAAGAATTCGATATGATAA ACCTTGGTATGACTGCCTCGATGTTCAGACATTAGTAGATACGGTACATGCAAAGAGCCAGAACGATGGTCAAGCGGAAG GTGGGAATCAATTCAAATATCGAGCAAGACGGGCCAAACAGGAAAAGCCTGAACGAGCATCATTGGTCCCCTCCCACATG TTGGTAACAGACGTATCGCATGTAAAGCAAGCCACTCGCATCTTCAAGGGCCTTGTCTTCTACGTTGCCAACACTTCCAG TGAGTACCCAGTTGAGAAAATTCACAAATTGGTTGTAGAGAATGGAGGCACCTTCTCTATGAACTTGAGCAGTACTGTTA CTCACGCGGTCGCATTCGAAAAGAAAGGACTCAAGTATCAGGCATCTTTTATGAATGGGGATGTCATTCATCTATCATGG CTTTTAGACTGCATGGCTCAGAAAGTACTCCTTGTAGTAAGCCCCAAGTATTACTTGAATATGTCAGATGCCACAAAGGA AAGACTGAAAGGTGAAGTTGACGAATTTGGAGATTTTTACTGCAACGAAGTTGATGAAACTGACCTTACACAGATCTTCG AAAACATAGATGTGAACAAGCAGTACCACGACATTGACAGAGTGAATTACTACATCAAGAAATATTCCCCATCTCCAACT TGGTGCCTTTTCTCCGGCTGCTGCGTCTTCTTTCTCCGTCCTCTTCACTCCGCGAATGAAAATACTCTACAGGTGGCAAA CCTAACATTGAGAAGACTTGCACTCGAGGTGGAGATGCACGAAGGCACCGTTTCTGACAAATTGACGCGTAGCATCACAC ACGTTGTGATGTATGTACCTACGGAAAGTCCCGTATCGTTCCAGATTATATTACGAAGTGCGTCATCGGAGGAAAGAAGG CTGCTATTATCGAAGCGGGTCAAAGTTGTAAGCCATCGCTGGATAGAGGATTCTGTTAACAGAAGTATCTACCGTCACCC CGCAGACGAAGAGTATGATCTCAGGACTGGAGAAGTGCTTTTGTCCGATGAGGAAGAAGAAGAGCTGGTGTCAAAAACTT CAGTCCCCATAAAGGCTGACTCGATGGTACCCATCACCCCAGACAAGAGGGTTGTACCTAGATCTCTTCGAAAACCAGCT ACGCGGAGACGAGCCCTGAACCTTGGAAGGCCTAGTAGAAGATCCAAAGGAACAGAGGAGGAACTTCCAAGAGTAGAGGC CCAAAAGTCGGGCAAAGAAGAGCACGTAGAGGATGACAGAGCACCAACAGAAATAACCAATAAGGGAACCAGGAATGATC CGAAGGCAGTGGAACCTTTTCAATTAGATGATTCTGCTTCTCGTACACCAGAAAAGAGAGTTCTTAGAGTTACTCGAAGC AGGAAAAAAGACAAACCATCATCTGGGAATGAGCGCCTACCTTTAAAACGACGTCTCATTCATGATGAAGGTGAGGCATC TCTGACCCAACCTTCAGACAAGGCACTCACAGGAGCGGAACCTTTCATACCAAGAATGTCGACCAGATTGGCTGAGAAAA GAAAAGCATTCGAAAGCAAGAGAGAAGCCGACACATATAAGCTAGAATGTACTGCAGCGGATCTTCGTGAGGAAGACCAA GAAGAGCCCGTGGAAGCTTCAGAATTCGAGGGGTTGCAGAACACCAGTTCTTTGAAAGAGCCAACTGGAAGGGACGACAG CAGATTACATTTCAACGATTTCGACCATCAAAGCCCAGCCATTGATGATATGATCAATACTCTACTTCCAAATTACGCCT CATCACAACAGGCTAACTTATCTCAACAAACGAACAGAGAGAGTGCCTTGCCCTCAAGGTCGAACTCATTTTTTATCAAA CCGACGTTGGCCCCACAACCCACTCAGGGAGTTCTAGGTAGCTACTCTCGACCATATCTCCCTTCACATTGTGCATCTGA AGCCCTCCAGCCGGTACCAGATGCTCCAGATAACTCTGATTTATTTTCATCAGTGCATCGTTTGGCAAGTTCACAAGACC ACTTGACTGGGACTGTGACGGTTGAATCATCCTCACAGGGGTTGGCAACTTATCTACCTCCGACCAACAACCCTGAGAAG AAGAAAAGAAGCTTTAAGGATCTGGTCAACCAGATGCTCAACGGTAACTGA |