| Microexon ID | Hv_2H:605241430-605241436:+ |
| Species | Hordeum Vulgare | Coordinates | 2H:605241430..605241436 |
| Microexon Cluster ID | MEP13 |
| Size | 7 |
| Phase | 0 |
| Pfam Domain Motif | DNA_ligase_A_M |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 13,38,7,50 |
| Microexon location in the Microexon-tag | 3 |
| Microexon-tag DNA Seq | AAYCAGGAAATWGCMAAGGCWGCAARRGAKGGRYTKGMSASTGATMGACAGTTRTGYTATGTTGCWTTTGAYRTTCTKTATGYTGGAGAYACYAGYGTYATYCAYCAR |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTGTGCT |
| Microexon Amino Acid seq | LCY |
| Microexon-tag DNA Seq | AACCAGGAAATAGCAAAGGCCGCTAGTGAGGGACTGGAGACTAATCGACAGTTGTGCTATATTGCTTTTGACATTCTTTATTCTGGAGACACTAGTGTTATCCACCAA |
| Microexon-tag Amino Acid Seq | NQEIAKAASEGLETNRQLCYIAFDILYSGDTSVIHQ |
| Microexon-tag spanning region | 605241200-605241763 |
| Microexon-tag prediction score | 0.9531 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | HORVU.MOREX.r3.2HG0192610.1x |
| Reference Transcript ID | HORVU.MOREX.r3.2HG0192610.1 |
| Gene ID | HORVU.MOREX.r3.2HG0192610 |
| Gene Name | NA |
| Transcript ID | HORVU.MOREX.r3.2HG0192610.1 |
| Protein ID | |
| Gene ID | HORVU.MOREX.r3.2HG0192610 |
| Gene Name | |
| Pfam domain motif | DNA_ligase_A_M |
| Motif E-value | 1.20E-43 |
| Motif start | 227 |
| Motif end | 442 |
| Protein seq | >HORVU.MOREX.r3.2HG0192610.1 MAATVRFGLLVAMFQAMTKDRTSAKKRGRLRTFLDRAYGASGRDDYFSALRLILPSLDRERGSYGLKEAALAAALVEALG IAKDSPDAVRLTNWRRGGGGRNAGNFSLVAAEVLQRRQGMTSGGLTIKEVNDALDRLSASDTRSEKASVLSSLIKKTNAL EMKWLLMIIIKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLNDRSQRHKRQDIEVGKAVRPQLAMRVGNASSAW KKLHGKPVVAECKFDGDRIQIHKNGEEIHFFSRTFLDHSEYTSGMSKFIKENILVDRCILDGEMLVWDTALNRFAEFGSN QEIAKAASEGLETNRQLCYIAFDILYSGDTSVIHQSLTERHEILRKVVKSLKGRLEILVPTGGLNTHRSPDEPCWSIFAP SIEDVEKFFKETVENRDEGIVLKDLDSKWEPGDRSGKWLKLKPDYIHAGADLDVIIIGGYYGSGRRGGEVAQFLVGLAVS SDDNSHPKRFLSFCRVGTGLSDEELATLVAKLKPHFSKSGTPKKTPRFYEVTNNSKERPDVWIESPDKSVLLSITSDIRT IKSEVFAAPYCLRFPRIQRVRYDKPWHECLDVQSFVEIVHSSNGSMHKAEDDKSLKNDNLKNPKINKRGEKKNVSIIPSH LMKTDISGLKGETLIFANTMFYFVNTPPSYNLDYFHKLVVENGGSFSMNLNDSVTHCIAAEKKGIKYQAAIRHGRIIHYS WILDCCKQKLLLRLQPKYILFLADFARHKFPEEIDLYADFYYWDIDVSDLKQIFINMDKVTVDPSMVHRYKKKYYADERF CFFQGCRVYLYHAPLVNEDYNVISDLALKRVKQDLTMHGGQCCSSLAPATHLVIVSVLEVYNFDILYKSFSPAERRYLHD KRLHVVSNKWLEDSVEKQMKLPETAYNLKPDTLEEIQIERSEEKAHPSNDKTAENEEVEISHVKHARKRGRAASSSSRTV RAAPRPVRTTRARRGNKQAKIDDGEPEENGPGETGQDDEKSNTDHISRMEEDNSDKDQRPPRAAPRPVRRTSARRGTRQA KIDYRESDESGPGETGEEDQKLGTDSVVKMEEDSLDEDQGPPAGAQFITLDEREPKVVKLSAAGETTSSPKYESKETSQR TDAGEGASMAGDKIEQMVDPLHAMLLDMIPSLREDTSSDPLAKVEHDPPRARSSVSDHRVPVPGTGSSASNPVAPAPRAG SSSYSVGVPAPDPNPAAPKKKKVSYKDLADEFLKDL* |
| CDS seq | >HORVU.MOREX.r3.2HG0192610.1 ATGGCGGCGACGGTGCGGTTCGGGCTGCTGGTGGCGATGTTCCAGGCCATGACGAAGGACCGCACGTCCGCGAAGAAGCG GGGCCGCCTCCGCACGTTCCTCGACCGCGCCTACGGGGCCAGCGGCAGGGACGACTACTTCAGCGCGCTCCGCCTCATCC TCCCGTCCCTCGACCGGGAGCGCGGCTCCTACGGCCTCAAGGAGGCCGCCCTCGCCGCCGCCCTCGTCGAAGCGCTCGGC ATCGCCAAGGACTCCCCCGACGCCGTCCGCCTCACCAACTGGCGCCGCGGCGGCGGCGGCCGCAACGCGGGCAACTTCTC CCTCGTCGCCGCCGAGGTGCTGCAGCGGAGGCAAGGAATGACTTCTGGTGGATTGACAATAAAGGAGGTTAATGACGCAC TCGATCGTCTATCTGCAAGTGATACTAGGTCTGAGAAGGCTTCGGTTCTTTCAAGTCTGATCAAGAAAACCAATGCCCTT GAAATGAAGTGGCTTCTAATGATTATTATTAAAGACTTGAAATTGGGGATCAGTGAGAAGAGCATATTCCATGAATTTCA TCCTGACGCTGAGGACTTGTTCAATGTCACTTGTGACTTAAAATTGGTCTGTGAAAAGCTTAATGATCGAAGTCAAAGGC ATAAACGTCAGGATATAGAAGTCGGAAAAGCTGTGAGACCTCAGCTAGCTATGAGAGTCGGTAACGCTTCATCTGCATGG AAGAAGCTTCACGGCAAACCAGTGGTTGCTGAGTGCAAATTTGATGGCGACCGTATCCAAATTCACAAGAATGGGGAAGA GATTCATTTCTTCTCACGGACCTTTCTTGATCATTCTGAATATACATCTGGGATGTCCAAATTTATTAAGGAAAATATCC TGGTTGACAGGTGTATTTTGGACGGAGAGATGCTTGTTTGGGACACTGCGCTTAATCGGTTTGCAGAATTTGGCTCAAAC CAGGAAATAGCAAAGGCCGCTAGTGAGGGACTGGAGACTAATCGACAGTTGTGCTATATTGCTTTTGACATTCTTTATTC TGGAGACACTAGTGTTATCCACCAAAGTTTGACGGAGCGTCATGAAATTCTGCGGAAGGTTGTCAAATCTTTAAAGGGTC GTCTTGAGATTTTGGTCCCAACAGGTGGTCTAAACACCCATCGCTCCCCAGATGAACCATGCTGGTCCATTTTTGCTCCC AGTATTGAAGACGTTGAGAAATTCTTCAAGGAGACCGTTGAAAACAGAGATGAGGGAATTGTACTGAAGGACCTTGATTC CAAATGGGAACCTGGTGATCGAAGTGGAAAGTGGCTTAAACTAAAGCCTGATTATATACATGCTGGTGCTGATCTGGATG TTATTATTATAGGTGGATATTATGGATCAGGGCGCCGAGGAGGAGAGGTTGCACAGTTTTTAGTTGGTCTTGCAGTGTCT TCAGATGATAATAGTCACCCCAAAAGGTTTCTTTCTTTTTGTCGAGTCGGTACTGGTCTCTCCGATGAAGAACTTGCAAC TCTAGTCGCGAAACTGAAGCCCCACTTTAGCAAAAGTGGGACCCCCAAAAAAACACCCAGATTTTATGAAGTAACAAACA ATTCGAAGGAGCGCCCAGATGTTTGGATAGAAAGCCCTGATAAGTCAGTCTTACTATCTATAACAAGTGATATTCGAACA ATCAAATCTGAGGTATTTGCTGCCCCATACTGCTTGAGGTTCCCCCGCATTCAACGAGTGAGATATGATAAGCCATGGCA TGAGTGCCTTGATGTGCAATCATTTGTGGAGATCGTGCATTCAAGTAATGGGTCAATGCACAAGGCAGAAGATGATAAGA GTCTGAAAAATGACAACTTAAAGAACCCAAAAATAAACAAAAGGGGTGAGAAAAAGAATGTATCAATCATCCCTTCACAT CTTATGAAGACTGACATATCAGGCTTAAAGGGCGAAACCCTGATTTTTGCAAACACGATGTTCTATTTTGTGAACACCCC TCCGTCATATAACCTCGACTATTTCCATAAACTGGTTGTGGAGAATGGAGGATCTTTCTCGATGAATCTTAATGACTCTG TTACTCACTGCATAGCAGCGGAGAAGAAAGGTATCAAATATCAAGCGGCCATACGCCATGGAAGGATCATTCATTATTCC TGGATCTTGGACTGTTGCAAGCAAAAACTACTACTTCGTTTGCAACCCAAGTATATCCTCTTCCTTGCAGATTTTGCCAG ACACAAATTTCCTGAAGAGATCGACTTGTACGCTGATTTTTACTACTGGGACATTGACGTTTCTGACCTGAAGCAGATTT TCATCAACATGGACAAAGTTACTGTCGATCCAAGCATGGTACATCGGTACAAAAAGAAGTATTATGCAGATGAAAGATTC TGCTTCTTCCAGGGTTGCCGCGTTTACTTGTATCATGCACCTTTAGTGAACGAGGACTACAACGTAATATCTGATCTTGC ACTAAAGAGGGTGAAGCAGGACCTTACAATGCATGGTGGTCAGTGTTGCAGCAGCCTTGCTCCTGCTACCCATTTGGTTA TAGTTTCAGTTCTTGAGGTGTACAATTTTGACATATTGTACAAGAGCTTCTCTCCAGCTGAGAGGCGTTACCTACATGAC AAAAGATTGCATGTTGTCAGTAACAAGTGGTTAGAAGATTCAGTGGAGAAACAAATGAAACTGCCTGAAACGGCCTACAA CCTTAAACCGGATACATTAGAAGAAATACAAATCGAAAGGAGTGAGGAGAAGGCCCATCCCTCTAATGACAAGACTGCTG AAAATGAGGAGGTTGAAATATCTCATGTTAAACATGCAAGGAAAAGGGGCAGAGCGGCCAGCAGTAGTTCGAGAACTGTA CGGGCTGCTCCTAGGCCGGTCCGAACAACAAGGGCTAGAAGAGGAAATAAGCAGGCAAAAATAGATGACGGTGAACCTGA AGAAAACGGTCCTGGTGAAACAGGTCAAGATGATGAAAAGTCGAACACCGATCACATCTCCAGGATGGAAGAAGATAACA GTGACAAGGACCAACGACCACCTCGAGCTGCTCCTAGACCAGTTCGAAGAACAAGTGCTAGAAGAGGAACCCGGCAAGCA AAAATAGACTATCGTGAATCTGACGAAAGCGGCCCTGGTGAAACAGGTGAAGAAGATCAAAAGCTGGGCACAGATTCCGT CGTAAAGATGGAAGAGGATAGCCTGGATGAAGACCAAGGACCGCCTGCAGGTGCCCAGTTCATCACATTGGACGAGCGGG AGCCCAAAGTCGTCAAATTGAGTGCGGCGGGGGAGACGACAAGCAGTCCAAAGTACGAAAGCAAAGAAACCTCCCAAAGA ACAGACGCTGGTGAAGGAGCAAGCATGGCAGGTGATAAGATAGAACAGATGGTGGATCCTCTGCATGCGATGCTCCTCGA CATGATACCGTCGCTTAGGGAAGACACAAGCAGCGATCCCCTGGCCAAAGTCGAGCATGACCCACCTCGTGCAAGAAGCT CCGTGTCGGATCACAGGGTTCCAGTGCCCGGGACAGGAAGTTCTGCATCGAATCCCGTGGCCCCGGCACCGCGGGCAGGA AGTTCGTCATACAGTGTGGGGGTTCCAGCACCAGATCCAAATCCCGCGGCTCCGAAGAAGAAAAAGGTTAGCTACAAAGA TCTGGCCGACGAGTTTCTGAAAGATTTGTGA |
Hv_2H:605241430-605241436:+ does not have available information here.