Microexon ID Vv_7:4221812-4221817:+
Species Vistis vinifera
Coordinates 7:4221812..4221817
Microexon Cluster ID MEP12
Size 6
Phase 1
Pfam Domain Motif Unknown
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 52,6,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GAAGAMCRTGTKCGKGAGGATKTKCARAAGTWYYCWAGRGGWTCYCCACAAGCWAGAGCTTATSGKAATGATGGMRCWMRRRGYCGWTCAASMCATTCAAAATCTCCM
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq CAAGAG
Microexon Amino Acid seq ARA
Microexon-tag DNA Seq GAAGACCGTATTCGTGACGATATGCAGAAACTGTCAAGAGGTTCCCCACAAGCAAGAGCTTATGGTAATGATGGAGCTAGAGGTCGTTCAAGCCATTCAAAATCTCCA
Microexon-tag Amino Acid Seq EDRIRDDMQKLSRGSPQARAYGNDGARGRSSHSKSP
Microexon-tag spanning region4221598-4222095
Microexon-tag prediction score0.9646
Overlapped with the annotated transcript (%) 94.44
New Transcript ID VIT_07s0005g01740.t01x
Reference Transcript ID VIT_07s0005g01740.t01
Gene ID VIT_07s0005g01740
Gene Name NA
Vv_7:4221812-4221817:+ does not have available information here.
Microexon DNA seq CAAGAG
Microexon Amino Acid seq QE
Microexon-tag DNA Seq CCACAAGGTAGGGACAGCATACGATATATTTACGGCATCCATAAAAAGCTGCAAGAGCTTATGGTAATGATGGAGCTAGAGGTCGTTCAAGCCATTCAAAATCTCCAG
Microexon-tag Amino Acid seq PQGRDSIRYIYGIHKKLQELMVMMELEVVQAIQNLQ
Transcript ID Vv.28460.3
Gene ID Vv.28460
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Vv.28460.3
MRFDFWAYPFVCVLISLFHIYYYGWVMFGNAGFHWMAKRPEPDDDDFSEIYKEYTGPPRSTTSNVQDKAKTSKRSHASSD
EEEEPRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGANRKSQDFFERVPAREKH
VKALFTEKVIHKIEKDIGCKIKMEEKFIIVSGKDRLILAKGIDAVHKVIKEEGNKKASSTSHMNRSRSPERSPVGPRFGR
SESQKSHPSPQNIAQFQQRFGRQERVVEDRIRDDMQKLSRGSPQGRDSIRYIYGIHKKLQELMVMMELEVVQAIQNLQLS
PLTRAVHIIHMMDIIRVWGSTEMMGGILRDEDLICNLAVSLNTLPPHRH*
CDS seq >Vv.28460.3
ATGCGTTTCGATTTTTGGGCTTATCCATTTGTTTGTGTTTTGATTTCTTTGTTCCACATATATTATTATGGCTGGGTAAT
GTTTGGCAATGCAGGTTTTCATTGGATGGCGAAAAGACCAGAACCAGACGATGATGATTTTAGCGAAATTTATAAGGAAT
ATACTGGTCCTCCTCGATCTACCACCAGCAATGTACAAGATAAAGCGAAAACAAGCAAAAGGTCTCATGCAAGTTCTGAT
GAGGAAGAGGAACCTCGTGACCCCAATGCTGTCCCAACAGATTTCACCAGTAGGGAAGCTAAGGTTTGGGAGGCTAAGTC
TAAAGCTACAGAGAGGAACTGGAAGAAAAGAAAGGAAGAAGAAATGATCTGCAAAATATGTGGCGAATCAGGCCACTTTA
CTCAGGGATGCCCATCTACTCTTGGAGCAAACCGCAAGTCTCAAGATTTCTTTGAAAGGGTTCCTGCAAGAGAAAAGCAT
GTGAAGGCGCTTTTCACAGAGAAAGTGATACACAAGATTGAAAAGGACATTGGCTGTAAAATTAAAATGGAGGAGAAATT
TATAATTGTTAGTGGCAAGGATAGGCTAATTTTGGCAAAAGGCATCGATGCAGTGCACAAAGTGATTAAGGAGGAGGGTA
ATAAAAAGGCTTCGTCTACTTCTCACATGAATAGGTCTAGGTCACCTGAGCGGAGCCCTGTTGGCCCTCGGTTTGGACGC
TCTGAATCCCAAAAATCTCATCCTAGTCCACAAAATATAGCACAGTTCCAACAGAGATTTGGCAGGCAAGAGAGAGTTGT
GGAAGACCGTATTCGTGACGATATGCAGAAACTGTCAAGAGGTTCCCCACAAGGTAGGGACAGCATACGATATATTTACG
GCATCCATAAAAAGCTGCAAGAGCTTATGGTAATGATGGAGCTAGAGGTCGTTCAAGCCATTCAAAATCTCCAGCTCAGC
CCCCTTACACGGGCAGTTCATATAATTCATATGATGGACATAATCAGAGTGTGGGGGTCTACAGAAATGATGGGTGGGAT
ACTGAGAGACGAGGATCTGATATGCAATCTGGCCGTAAGTTTGAATACCCTGCCGCCCCACAGACATTAG