
Microexon ID | Vv_7:4221812-4221817:+ |
Species | Vistis vinifera | Coordinates | 7:4221812..4221817 |
Microexon Cluster ID | MEP12 |
Size | 6 |
Phase | 1 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,6,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GAAGAMCRTGTKCGKGAGGATKTKCARAAGTWYYCWAGRGGWTCYCCACAAGCWAGAGCTTATSGKAATGATGGMRCWMRRRGYCGWTCAASMCATTCAAAATCTCCM |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CAAGAG |
Microexon Amino Acid seq | ARA |
Microexon-tag DNA Seq | GAAGACCGTATTCGTGACGATATGCAGAAACTGTCAAGAGGTTCCCCACAAGCAAGAGCTTATGGTAATGATGGAGCTAGAGGTCGTTCAAGCCATTCAAAATCTCCA |
Microexon-tag Amino Acid Seq | EDRIRDDMQKLSRGSPQARAYGNDGARGRSSHSKSP |
Microexon-tag spanning region | 4221598-4222095 |
Microexon-tag prediction score | 0.9646 |
Overlapped with the annotated transcript (%) | 94.44 |
New Transcript ID | VIT_07s0005g01740.t01x |
Reference Transcript ID | VIT_07s0005g01740.t01 |
Gene ID | VIT_07s0005g01740 |
Gene Name | NA |
Vv_7:4221812-4221817:+ does not have available information here.
Microexon DNA seq | CAAGAG |
Microexon Amino Acid seq | QE |
Microexon-tag DNA Seq | CCACAAGGTAGGGACAGCATACGATATATTTACGGCATCCATAAAAAGCTGCAAGAGCTTATGGTAATGATGGAGCTAGAGGTCGTTCAAGCCATTCAAAATCTCCAG |
Microexon-tag Amino Acid seq | PQGRDSIRYIYGIHKKLQELMVMMELEVVQAIQNLQ |
Transcript ID | Vv.28460.3 |
Gene ID | Vv.28460 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Vv.28460.3 MRFDFWAYPFVCVLISLFHIYYYGWVMFGNAGFHWMAKRPEPDDDDFSEIYKEYTGPPRSTTSNVQDKAKTSKRSHASSD EEEEPRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGANRKSQDFFERVPAREKH VKALFTEKVIHKIEKDIGCKIKMEEKFIIVSGKDRLILAKGIDAVHKVIKEEGNKKASSTSHMNRSRSPERSPVGPRFGR SESQKSHPSPQNIAQFQQRFGRQERVVEDRIRDDMQKLSRGSPQGRDSIRYIYGIHKKLQELMVMMELEVVQAIQNLQLS PLTRAVHIIHMMDIIRVWGSTEMMGGILRDEDLICNLAVSLNTLPPHRH* |
CDS seq | >Vv.28460.3 ATGCGTTTCGATTTTTGGGCTTATCCATTTGTTTGTGTTTTGATTTCTTTGTTCCACATATATTATTATGGCTGGGTAAT GTTTGGCAATGCAGGTTTTCATTGGATGGCGAAAAGACCAGAACCAGACGATGATGATTTTAGCGAAATTTATAAGGAAT ATACTGGTCCTCCTCGATCTACCACCAGCAATGTACAAGATAAAGCGAAAACAAGCAAAAGGTCTCATGCAAGTTCTGAT GAGGAAGAGGAACCTCGTGACCCCAATGCTGTCCCAACAGATTTCACCAGTAGGGAAGCTAAGGTTTGGGAGGCTAAGTC TAAAGCTACAGAGAGGAACTGGAAGAAAAGAAAGGAAGAAGAAATGATCTGCAAAATATGTGGCGAATCAGGCCACTTTA CTCAGGGATGCCCATCTACTCTTGGAGCAAACCGCAAGTCTCAAGATTTCTTTGAAAGGGTTCCTGCAAGAGAAAAGCAT GTGAAGGCGCTTTTCACAGAGAAAGTGATACACAAGATTGAAAAGGACATTGGCTGTAAAATTAAAATGGAGGAGAAATT TATAATTGTTAGTGGCAAGGATAGGCTAATTTTGGCAAAAGGCATCGATGCAGTGCACAAAGTGATTAAGGAGGAGGGTA ATAAAAAGGCTTCGTCTACTTCTCACATGAATAGGTCTAGGTCACCTGAGCGGAGCCCTGTTGGCCCTCGGTTTGGACGC TCTGAATCCCAAAAATCTCATCCTAGTCCACAAAATATAGCACAGTTCCAACAGAGATTTGGCAGGCAAGAGAGAGTTGT GGAAGACCGTATTCGTGACGATATGCAGAAACTGTCAAGAGGTTCCCCACAAGGTAGGGACAGCATACGATATATTTACG GCATCCATAAAAAGCTGCAAGAGCTTATGGTAATGATGGAGCTAGAGGTCGTTCAAGCCATTCAAAATCTCCAGCTCAGC CCCCTTACACGGGCAGTTCATATAATTCATATGATGGACATAATCAGAGTGTGGGGGTCTACAGAAATGATGGGTGGGAT ACTGAGAGACGAGGATCTGATATGCAATCTGGCCGTAAGTTTGAATACCCTGCCGCCCCACAGACATTAG |