Microexon ID Zm_1:153226649-153226654:+
Species Zea mays
Coordinates 1:153226649..153226654
Microexon Cluster ID MEP11
Size 6
Phase 0
Pfam Domain Motif TRAP_beta
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCTAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq TTCCCACTGGATATTCTCGCTGAGAGACTTCCTGAGAAGAAGTTTGAATGGGCTAAGAGGCTTGTGGCGAAATATGGGTCACTTGTGTCTGTTGTCTCATTTGTTGGA
Microexon-tag Amino Acid Seq FPLDILAERLPEKKFEWAKRLVAKYGSLVSVVSFVG
Microexon-tag spanning region153226475-153226830
Microexon-tag prediction score0.9683
Overlapped with the annotated transcript (%) 100
New Transcript ID Zm00001d030690_T001x
Reference Transcript ID Zm00001d030690_T001
Gene ID Zm00001d030690
Gene Name NA
Transcript ID Zm00001d030690_T001
Protein ID Zm00001d030690_P001
Gene ID Zm00001d030690
Gene Name NA
Pfam domain motif TRAP_beta
Motif E-value 6.4e-47
Motif start 14
Motif end 195
Protein seq >Zm00001d030690_P001
MARCLALVSLLLLGLASAASAADAPFVVAHKKVSLSRPKPGVERVAVSLDLYNQGSAICMDLCKAYCRTAYDVSLNDDSW
PTQAFELVTGEKSKTLERLDPGATATHTYVLETKTQGRFQGSPAIITYRVPTKTALQEAYSTPIFPLDILAERLPEKKFE
WAKRLVAKYGSLVSVVSFVGLFIYLVASPSKSSSKGSKKRR*
CDS seq >Zm00001d030690_T001
ATGGCGCGGTGCCTCGCGCTCGTCTCCCTCCTTCTCCTCGGCCTCGCCTCCGCCGCCTCCGCTGCCGATGCGCCCTTTGT
CGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCGGGCGTCGAGCGCGTCGCCGTCTCCCTCGACCTCTACAACC
AGGGATCCGCCATCTGCATGGACTTATGTAAAGCCTATTGCAGGACTGCCTATGATGTGTCACTTAATGACGACTCTTGG
CCAACACAAGCATTTGAGCTTGTCACTGGAGAGAAATCGAAGACATTGGAAAGGCTTGACCCTGGTGCCACTGCTACACA
CACATATGTCCTGGAGACCAAAACACAGGGCAGGTTCCAGGGTTCACCAGCTATTATTACGTACCGTGTTCCCACAAAGA
CTGCTCTTCAGGAGGCCTACTCAACTCCCATCTTCCCACTGGATATTCTCGCTGAGAGACTTCCTGAGAAGAAGTTTGAA
TGGGCTAAGAGGCTTGTGGCGAAATATGGGTCACTTGTGTCTGTTGTCTCATTTGTTGGATTGTTTATCTACCTCGTTGC
GAGCCCGTCGAAGAGCAGCTCAAAAGGAAGCAAGAAGAGACGTTGA
Microexon DNA seq GCTAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq TTCCCACTGGATATTCTCGCTGAGAGACTTCCTGAGAAGAAGTTTGAATGGGCTAAGAGGCTTGTGGCGAAATATGGGTCACTTGTGTCTGTTGTCTCATTTGTTGGA
Microexon-tag Amino Acid seq FPLDILAERLPEKKFEWAKRLVAKYGSLVSVVSFVG
Transcript ID Zm00001d030690_T001
Gene ID Zm.2556
Gene Name NA
Pfam domain motif TRAP_beta
Motif E-value 6.5e-47
Motif start 14
Motif end 195
Protein seq >Zm00001d030690_T001
MARCLALVSLLLLGLASAASAADAPFVVAHKKVSLSRPKPGVERVAVSLDLYNQGSAICMDLCKAYCRTAYDVSLNDDSW
PTQAFELVTGEKSKTLERLDPGATATHTYVLETKTQGRFQGSPAIITYRVPTKTALQEAYSTPIFPLDILAERLPEKKFE
WAKRLVAKYGSLVSVVSFVGLFIYLVASPSKSSSKGSKKRR*
CDS seq >Zm00001d030690_T001
ATGGCGCGGTGCCTCGCGCTCGTCTCCCTCCTTCTCCTCGGCCTCGCCTCCGCCGCCTCCGCTGCCGATGCGCCCTTTGT
CGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCGGGCGTCGAGCGCGTCGCCGTCTCCCTCGACCTCTACAACC
AGGGATCCGCCATCTGCATGGACTTATGTAAAGCCTATTGCAGGACTGCCTATGATGTGTCACTTAATGACGACTCTTGG
CCAACACAAGCATTTGAGCTTGTCACTGGAGAGAAATCGAAGACATTGGAAAGGCTTGACCCTGGTGCCACTGCTACACA
CACATATGTCCTGGAGACCAAAACACAGGGCAGGTTCCAGGGTTCACCAGCTATTATTACGTACCGTGTTCCCACAAAGA
CTGCTCTTCAGGAGGCCTACTCAACTCCCATCTTCCCACTGGATATTCTCGCTGAGAGACTTCCTGAGAAGAAGTTTGAA
TGGGCTAAGAGGCTTGTGGCGAAATATGGGTCACTTGTGTCTGTTGTCTCATTTGTTGGATTGTTTATCTACCTCGTTGC
GAGCCCGTCGAAGAGCAGCTCAAAAGGAAGCAAGAAGAGACGTTGA