Microexon ID Vv_14:25075992-25075997:-
Species Vistis vinifera
Coordinates 14:25075992..25075997
Microexon Cluster ID MEP11
Size 6
Phase 0
Pfam Domain Motif TRAP_beta
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCTAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq TTACCTTTAGATATCCTTGCAGTGAGACCTCCAGAGAAGAAGTTTGAGTGGGCTAAGAGGTTGTTGGCAAAATATGGGTCCCAGATCTCTGTGATCTCCATTGTGTCT
Microexon-tag Amino Acid Seq LPLDILAVRPPEKKFEWAKRLLAKYGSQISVISIVS
Microexon-tag spanning region25075474-25076172
Microexon-tag prediction score0.9608
Overlapped with the annotated transcript (%) 94.44
New Transcript ID VIT_14s0068g01370.t01x
Reference Transcript ID VIT_14s0068g01370.t01
Gene ID VIT_14s0068g01370
Gene Name NA
Vv_14:25075992-25075997:- does not have available information here.
Microexon DNA seq GCTAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq TTACCTTTAGATATCCTTGCAGTGAGACCTCCAGAGAAGAAGTTTGAGTGGGCTAAGAGGTTGTTGGCAAAATATGGGTCCCAGATCTCTGTGATCTCCATTGTGTCT
Microexon-tag Amino Acid seq LPLDILAVRPPEKKFEWAKRLLAKYGSQISVISIVS
Transcript ID Vv.9963.1
Gene ID Vv.9963
Gene Name NA
Pfam domain motif TRAP_beta
Motif E-value 3.4e-55
Motif start 12
Motif end 186
Protein seq >Vv.9963.1
MAKTLISVVVALILVSSTLGSSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSTTAYDVSLTDDSWSQDVFNIVSGN
TSTSWERLDAGGLLSHAFELESKVEGMFYGAPAVITFRIPTTAALQEAYSTPILPLDILAVRPPEKKFEWAKRLLAKYGS
QISVISIVSVFVYLVASPSKSGAGKGSKKKR*
CDS seq >Vv.9963.1
ATGGCGAAGACTCTGATCTCTGTAGTCGTGGCTCTGATACTCGTTTCGTCGACGCTCGGGAGCTCAGATGTTCCGTTCAT
TGTGGCCCACAAGAAGGCCTCTCTCACCAGGCTTAAGTCCGGCGCCGAGCGAGTCTCCGTGTCCATCGACATCTACAATC
AAGGATCCACGACTGCGTATGATGTAAGTCTCACTGATGATAGCTGGTCTCAAGATGTATTTAATATTGTCAGTGGCAAC
ACTTCAACATCATGGGAAAGGCTTGATGCTGGTGGTCTTCTATCACATGCTTTTGAATTGGAGTCCAAAGTGGAAGGAAT
GTTTTATGGTGCACCAGCAGTCATTACATTCCGCATCCCTACCACGGCTGCTCTGCAGGAGGCATATTCAACTCCAATAT
TACCTTTAGATATCCTTGCAGTGAGACCTCCAGAGAAGAAGTTTGAGTGGGCTAAGAGGTTGTTGGCAAAATATGGGTCC
CAGATCTCTGTGATCTCCATTGTGTCTGTCTTTGTGTATCTGGTCGCCAGTCCATCAAAATCCGGTGCTGGGAAAGGAAG
CAAGAAGAAGCGTTAA