
Microexon ID | Vv_14:25075992-25075997:- |
Species | Vistis vinifera | Coordinates | 14:25075992..25075997 |
Microexon Cluster ID | MEP11 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | TRAP_beta |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCTAAG |
Microexon Amino Acid seq | AK |
Microexon-tag DNA Seq | TTACCTTTAGATATCCTTGCAGTGAGACCTCCAGAGAAGAAGTTTGAGTGGGCTAAGAGGTTGTTGGCAAAATATGGGTCCCAGATCTCTGTGATCTCCATTGTGTCT |
Microexon-tag Amino Acid Seq | LPLDILAVRPPEKKFEWAKRLLAKYGSQISVISIVS |
Microexon-tag spanning region | 25075474-25076172 |
Microexon-tag prediction score | 0.9608 |
Overlapped with the annotated transcript (%) | 94.44 |
New Transcript ID | VIT_14s0068g01370.t01x |
Reference Transcript ID | VIT_14s0068g01370.t01 |
Gene ID | VIT_14s0068g01370 |
Gene Name | NA |
Vv_14:25075992-25075997:- does not have available information here.
Microexon DNA seq | GCTAAG |
Microexon Amino Acid seq | AK |
Microexon-tag DNA Seq | TTACCTTTAGATATCCTTGCAGTGAGACCTCCAGAGAAGAAGTTTGAGTGGGCTAAGAGGTTGTTGGCAAAATATGGGTCCCAGATCTCTGTGATCTCCATTGTGTCT |
Microexon-tag Amino Acid seq | LPLDILAVRPPEKKFEWAKRLLAKYGSQISVISIVS |
Transcript ID | Vv.9963.1 |
Gene ID | Vv.9963 |
Gene Name | NA |
Pfam domain motif | TRAP_beta |
Motif E-value | 3.4e-55 |
Motif start | 12 |
Motif end | 186 |
Protein seq | >Vv.9963.1 MAKTLISVVVALILVSSTLGSSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSTTAYDVSLTDDSWSQDVFNIVSGN TSTSWERLDAGGLLSHAFELESKVEGMFYGAPAVITFRIPTTAALQEAYSTPILPLDILAVRPPEKKFEWAKRLLAKYGS QISVISIVSVFVYLVASPSKSGAGKGSKKKR* |
CDS seq | >Vv.9963.1 ATGGCGAAGACTCTGATCTCTGTAGTCGTGGCTCTGATACTCGTTTCGTCGACGCTCGGGAGCTCAGATGTTCCGTTCAT TGTGGCCCACAAGAAGGCCTCTCTCACCAGGCTTAAGTCCGGCGCCGAGCGAGTCTCCGTGTCCATCGACATCTACAATC AAGGATCCACGACTGCGTATGATGTAAGTCTCACTGATGATAGCTGGTCTCAAGATGTATTTAATATTGTCAGTGGCAAC ACTTCAACATCATGGGAAAGGCTTGATGCTGGTGGTCTTCTATCACATGCTTTTGAATTGGAGTCCAAAGTGGAAGGAAT GTTTTATGGTGCACCAGCAGTCATTACATTCCGCATCCCTACCACGGCTGCTCTGCAGGAGGCATATTCAACTCCAATAT TACCTTTAGATATCCTTGCAGTGAGACCTCCAGAGAAGAAGTTTGAGTGGGCTAAGAGGTTGTTGGCAAAATATGGGTCC CAGATCTCTGTGATCTCCATTGTGTCTGTCTTTGTGTATCTGGTCGCCAGTCCATCAAAATCCGGTGCTGGGAAAGGAAG CAAGAAGAAGCGTTAA |