Microexon ID Ta_3D:41697576-41697581:-
Species Triticum   Aestivum
Coordinates 3D:41697576..41697581
Microexon Cluster ID MEP11
Size 6
Phase 0
Pfam Domain Motif TRAP_beta
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCTAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq CTCCCCCTGGACATTCTTGCTGAAAGACCTCCAGTGAAGAAGTTTGAATGGGCTAAGAAACTTATTGCAAAGTACGGAGCACTGGTGTCTGTCGTTTCCTTCGTTCTG
Microexon-tag Amino Acid Seq LPLDILAERPPVKKFEWAKKLIAKYGALVSVVSFVL
Microexon-tag spanning region41697440-41697756
Microexon-tag prediction score0.9516
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS3D02G082300.1x
Reference Transcript ID TraesCS3D02G082300.1
Gene ID TraesCS3D02G082300
Gene Name NA
Transcript ID TraesCS3D02G082300.1
Protein ID
Gene ID TraesCS3D02G082300
Gene Name
Pfam domain motif TRAP_beta
Motif E-value 6.70E-53
Motif start 13
Motif end 188
Protein seq >TraesCS3D02G082300.1
MATTRPLLLCAALLLAALSCTFAADAPFLVAHKKVALSRPKPGVERLAVSLDLYNQGSATAYDVAINDDSWPKEAFELVS
GEVSKTLERLEPGATASHAFVLESKTQGRFQASPAVIKYRVATKAALQEAYSTPILPLDILAERPPVKKFEWAKKLIAKY
GALVSVVSFVLGFIYLVASPSKSAGSKSGKKRR*
CDS seq >TraesCS3D02G082300.1
ATGGCGACGACGCGCCCGCTCCTCCTCTGTGCCGCCCTCCTCCTCGCCGCCCTCTCCTGCACCTTCGCCGCCGACGCGCC
CTTCCTCGTCGCGCACAAGAAGGTGGCCCTCTCCCGCCCCAAGCCCGGCGTCGAGCGCCTCGCCGTCTCCCTCGACCTCT
ACAACCAGGGATCCGCAACTGCATATGATGTGGCCATTAATGATGACTCGTGGCCAAAGGAAGCATTTGAACTTGTCTCT
GGAGAGGTCTCAAAGACTTTGGAAAGGCTTGAACCTGGCGCCACTGCTTCGCACGCGTTTGTATTGGAGAGCAAAACACA
GGGCAGGTTCCAAGCTTCACCTGCTGTTATCAAGTACCGTGTTGCCACAAAGGCTGCACTGCAGGAGGCCTACTCAACTC
CCATCCTCCCCCTGGACATTCTTGCTGAAAGACCTCCAGTGAAGAAGTTTGAATGGGCTAAGAAACTTATTGCAAAGTAC
GGAGCACTGGTGTCTGTCGTTTCCTTCGTTCTGGGGTTCATCTACCTGGTCGCGAGCCCATCGAAATCTGCCGGCTCAAA
GTCTGGCAAGAAGAGGCGCTGA
Ta_3D:41697576-41697581:- does not have available information here.