
Microexon ID | Ta_3D:41697576-41697581:- |
Species | Triticum Aestivum | Coordinates | 3D:41697576..41697581 |
Microexon Cluster ID | MEP11 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | TRAP_beta |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCTAAG |
Microexon Amino Acid seq | AK |
Microexon-tag DNA Seq | CTCCCCCTGGACATTCTTGCTGAAAGACCTCCAGTGAAGAAGTTTGAATGGGCTAAGAAACTTATTGCAAAGTACGGAGCACTGGTGTCTGTCGTTTCCTTCGTTCTG |
Microexon-tag Amino Acid Seq | LPLDILAERPPVKKFEWAKKLIAKYGALVSVVSFVL |
Microexon-tag spanning region | 41697440-41697756 |
Microexon-tag prediction score | 0.9516 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS3D02G082300.1x |
Reference Transcript ID | TraesCS3D02G082300.1 |
Gene ID | TraesCS3D02G082300 |
Gene Name | NA |
Transcript ID | TraesCS3D02G082300.1 |
Protein ID | |
Gene ID | TraesCS3D02G082300 |
Gene Name | |
Pfam domain motif | TRAP_beta |
Motif E-value | 6.70E-53 |
Motif start | 13 |
Motif end | 188 |
Protein seq | >TraesCS3D02G082300.1 MATTRPLLLCAALLLAALSCTFAADAPFLVAHKKVALSRPKPGVERLAVSLDLYNQGSATAYDVAINDDSWPKEAFELVS GEVSKTLERLEPGATASHAFVLESKTQGRFQASPAVIKYRVATKAALQEAYSTPILPLDILAERPPVKKFEWAKKLIAKY GALVSVVSFVLGFIYLVASPSKSAGSKSGKKRR* |
CDS seq | >TraesCS3D02G082300.1 ATGGCGACGACGCGCCCGCTCCTCCTCTGTGCCGCCCTCCTCCTCGCCGCCCTCTCCTGCACCTTCGCCGCCGACGCGCC CTTCCTCGTCGCGCACAAGAAGGTGGCCCTCTCCCGCCCCAAGCCCGGCGTCGAGCGCCTCGCCGTCTCCCTCGACCTCT ACAACCAGGGATCCGCAACTGCATATGATGTGGCCATTAATGATGACTCGTGGCCAAAGGAAGCATTTGAACTTGTCTCT GGAGAGGTCTCAAAGACTTTGGAAAGGCTTGAACCTGGCGCCACTGCTTCGCACGCGTTTGTATTGGAGAGCAAAACACA GGGCAGGTTCCAAGCTTCACCTGCTGTTATCAAGTACCGTGTTGCCACAAAGGCTGCACTGCAGGAGGCCTACTCAACTC CCATCCTCCCCCTGGACATTCTTGCTGAAAGACCTCCAGTGAAGAAGTTTGAATGGGCTAAGAAACTTATTGCAAAGTAC GGAGCACTGGTGTCTGTCGTTTCCTTCGTTCTGGGGTTCATCTACCTGGTCGCGAGCCCATCGAAATCTGCCGGCTCAAA GTCTGGCAAGAAGAGGCGCTGA |
Ta_3D:41697576-41697581:- does not have available information here.