Microexon ID Ta_3B:65194417-65194422:-
Species Triticum   Aestivum
Coordinates 3B:65194417..65194422
Microexon Cluster ID MEP11
Size 6
Phase 0
Pfam Domain Motif TRAP_beta
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCTAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq CCCCCCCTGGACATTCTTGCTGAAAGACCTCCAGTGAAGAAGTTTGAATGGGCTAAGAAACTTGTTGCGAAGTACGGAGCACTGGTGTCTGTCGTTTCCTTCGTTCTG
Microexon-tag Amino Acid Seq PPLDILAERPPVKKFEWAKKLVAKYGALVSVVSFVL
Microexon-tag spanning region65194281-65194598
Microexon-tag prediction score0.9507
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS3B02G097200.1x
Reference Transcript ID TraesCS3B02G097200.1
Gene ID TraesCS3B02G097200
Gene Name NA
Transcript ID TraesCS3B02G097200.1
Protein ID
Gene ID TraesCS3B02G097200
Gene Name
Pfam domain motif TRAP_beta
Motif E-value 9.90E-53
Motif start 13
Motif end 188
Protein seq >TraesCS3B02G097200.1
MATTRPLLLCAALLLAALSCTFAADAPFLVAHKKVALSRPKPGVERLAVSLDLYNQGSATAYDVAINDDSWPKEAFELVS
GEVSKTLERLEPGATASHAFVLESKTQGRFQASPAVIKYRVATKAALQEAYSTPIPPLDILAERPPVKKFEWAKKLVAKY
GALVSVVSFVLGFIYLVASPSKSAGSKSGKKRR*
CDS seq >TraesCS3B02G097200.1
ATGGCGACGACGCGCCCGCTCCTCCTCTGCGCCGCCCTCCTCCTCGCCGCCCTCTCCTGCACCTTCGCCGCCGACGCGCC
CTTCCTCGTCGCGCACAAGAAGGTGGCCCTCTCCCGCCCCAAGCCCGGCGTCGAGCGCCTCGCCGTCTCCCTCGACCTCT
ACAACCAGGGATCCGCAACTGCATATGATGTGGCCATTAATGATGACTCGTGGCCCAAGGAAGCATTTGAACTTGTCTCT
GGAGAGGTCTCGAAGACTTTGGAAAGGCTTGAACCTGGTGCCACTGCCTCGCACGCGTTTGTATTGGAGAGCAAAACACA
GGGCAGGTTCCAAGCTTCACCCGCTGTTATCAAGTACCGTGTTGCCACAAAGGCTGCACTTCAGGAGGCCTACTCAACTC
CCATCCCCCCCCTGGACATTCTTGCTGAAAGACCTCCAGTGAAGAAGTTTGAATGGGCTAAGAAACTTGTTGCGAAGTAC
GGAGCACTGGTGTCTGTCGTTTCCTTCGTTCTGGGGTTCATCTACCTGGTCGCGAGCCCATCGAAATCTGCTGGCTCAAA
GTCTGGCAAGAAGAGGCGCTGA
Ta_3B:65194417-65194422:- does not have available information here.