
Microexon ID | Ta_3A:53209767-53209772:- |
Species | Triticum Aestivum | Coordinates | 3A:53209767..53209772 |
Microexon Cluster ID | MEP11 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | TRAP_beta |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCTAAG |
Microexon Amino Acid seq | AK |
Microexon-tag DNA Seq | CTCCCCCTGGACATTCTTGCTGAAAGACCTCCAGTGAAGAAGTTTGAATGGGCTAAGAAACTTGTTGCGAAGTATGGAGCACTGGTGTCCGTTGTTTCCTTCGTTCTG |
Microexon-tag Amino Acid Seq | LPLDILAERPPVKKFEWAKKLVAKYGALVSVVSFVL |
Microexon-tag spanning region | 53209631-53209950 |
Microexon-tag prediction score | 0.9555 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS3A02G082100.1x |
Reference Transcript ID | TraesCS3A02G082100.1 |
Gene ID | TraesCS3A02G082100 |
Gene Name | NA |
Transcript ID | TraesCS3A02G082100.1 |
Protein ID | |
Gene ID | TraesCS3A02G082100 |
Gene Name | |
Pfam domain motif | TRAP_beta |
Motif E-value | 9.20E-53 |
Motif start | 13 |
Motif end | 188 |
Protein seq | >TraesCS3A02G082100.1 MAATRSLLLCAAVLLAALSCTFAADAPFLVAHKKVALSRPKPGVERLAVSLDLYNQGSATAYDVAINDDSWPKEAFELVS GEVSKTLERLEPGATASHAFVLESKTQGRFQASPAVIKYRVATKAALQEAYSTPILPLDILAERPPVKKFEWAKKLVAKY GALVSVVSFVLGFIYLVASPSKSAGSKSGKKRR* |
CDS seq | >TraesCS3A02G082100.1 ATGGCGGCGACCCGCTCGCTCCTCCTCTGCGCCGCCGTCCTCCTCGCCGCCCTCTCCTGCACCTTCGCCGCCGACGCGCC CTTCCTCGTCGCGCACAAGAAGGTGGCCCTCTCCCGCCCCAAGCCCGGCGTCGAGCGCCTCGCCGTCTCCCTCGACCTCT ACAACCAGGGATCCGCAACTGCATATGATGTGGCCATTAATGATGACTCGTGGCCAAAGGAAGCATTTGAACTTGTCTCT GGAGAGGTCTCAAAGACTTTGGAAAGGCTTGAACCTGGTGCCACTGCTTCGCACGCGTTTGTATTGGAGAGCAAAACACA GGGCAGGTTCCAAGCTTCACCTGCTGTTATCAAGTACCGTGTTGCCACAAAGGCTGCACTTCAGGAGGCCTACTCAACTC CCATCCTCCCCCTGGACATTCTTGCTGAAAGACCTCCAGTGAAGAAGTTTGAATGGGCTAAGAAACTTGTTGCGAAGTAT GGAGCACTGGTGTCCGTTGTTTCCTTCGTTCTGGGGTTCATCTACCTGGTCGCGAGCCCATCGAAATCTGCCGGCTCAAA GTCTGGCAAGAAGAGGCGCTGA |
Ta_3A:53209767-53209772:- does not have available information here.