Microexon ID Ta_3A:53209767-53209772:-
Species Triticum   Aestivum
Coordinates 3A:53209767..53209772
Microexon Cluster ID MEP11
Size 6
Phase 0
Pfam Domain Motif TRAP_beta
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCTAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq CTCCCCCTGGACATTCTTGCTGAAAGACCTCCAGTGAAGAAGTTTGAATGGGCTAAGAAACTTGTTGCGAAGTATGGAGCACTGGTGTCCGTTGTTTCCTTCGTTCTG
Microexon-tag Amino Acid Seq LPLDILAERPPVKKFEWAKKLVAKYGALVSVVSFVL
Microexon-tag spanning region53209631-53209950
Microexon-tag prediction score0.9555
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS3A02G082100.1x
Reference Transcript ID TraesCS3A02G082100.1
Gene ID TraesCS3A02G082100
Gene Name NA
Transcript ID TraesCS3A02G082100.1
Protein ID
Gene ID TraesCS3A02G082100
Gene Name
Pfam domain motif TRAP_beta
Motif E-value 9.20E-53
Motif start 13
Motif end 188
Protein seq >TraesCS3A02G082100.1
MAATRSLLLCAAVLLAALSCTFAADAPFLVAHKKVALSRPKPGVERLAVSLDLYNQGSATAYDVAINDDSWPKEAFELVS
GEVSKTLERLEPGATASHAFVLESKTQGRFQASPAVIKYRVATKAALQEAYSTPILPLDILAERPPVKKFEWAKKLVAKY
GALVSVVSFVLGFIYLVASPSKSAGSKSGKKRR*
CDS seq >TraesCS3A02G082100.1
ATGGCGGCGACCCGCTCGCTCCTCCTCTGCGCCGCCGTCCTCCTCGCCGCCCTCTCCTGCACCTTCGCCGCCGACGCGCC
CTTCCTCGTCGCGCACAAGAAGGTGGCCCTCTCCCGCCCCAAGCCCGGCGTCGAGCGCCTCGCCGTCTCCCTCGACCTCT
ACAACCAGGGATCCGCAACTGCATATGATGTGGCCATTAATGATGACTCGTGGCCAAAGGAAGCATTTGAACTTGTCTCT
GGAGAGGTCTCAAAGACTTTGGAAAGGCTTGAACCTGGTGCCACTGCTTCGCACGCGTTTGTATTGGAGAGCAAAACACA
GGGCAGGTTCCAAGCTTCACCTGCTGTTATCAAGTACCGTGTTGCCACAAAGGCTGCACTTCAGGAGGCCTACTCAACTC
CCATCCTCCCCCTGGACATTCTTGCTGAAAGACCTCCAGTGAAGAAGTTTGAATGGGCTAAGAAACTTGTTGCGAAGTAT
GGAGCACTGGTGTCCGTTGTTTCCTTCGTTCTGGGGTTCATCTACCTGGTCGCGAGCCCATCGAAATCTGCCGGCTCAAA
GTCTGGCAAGAAGAGGCGCTGA
Ta_3A:53209767-53209772:- does not have available information here.