Microexon ID Sm_GL377743:22539-22544:+
Species Selaginella moellendorffii
Coordinates GL377743:22539..22544
Microexon Cluster ID MEP11
Size 6
Phase 0
Pfam Domain Motif TRAP_beta
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Sm_GL377743:22539-22544:+ does not have available information here.
Sm_GL377743:22539-22544:+ does not have available information here.
Microexon DNA seq ATCAAG
Microexon Amino Acid seq IK
Microexon-tag DNA Seq CCGCCGCTGGACACTCTCTCCGACAAACCAAGTGGGATCAAATACGATTTCATCAAGAACATCGCGTTGAAATACGGCCCTCTTGTGTCGGTGCTTTCCATCGTGGGG
Microexon-tag Amino Acid seq PPLDTLSDKPSGIKYDFIKNIALKYGPLVSVLSIVG
Transcript ID Sm.31971.1
Gene ID Sm.31971
Gene Name NA
Pfam domain motif TRAP_beta
Motif E-value 3.6e-39
Motif start 16
Motif end 190
Protein seq >Sm.31971.1
MAGAALVFAFVALLGAVGALADASSGAFLLLHKEVQIKRLKPGSERITVSLVVHNAGSTTAYDVSLIDDSWPSSYFNVVS
GDTSTAWEKLEVGKSLQHSFVLEPKTKGSFQAAPAVVKYRVAAKSALQEAWSTPLPPLDTLSDKPSGIKYDFIKNIALKY
GPLVSVLSIVGIFVYLMVAPSSSKKSKSKKRR*
CDS seq >Sm.31971.1
ATGGCTGGAGCGGCCCTCGTCTTCGCATTCGTGGCGCTGCTCGGCGCCGTGGGAGCGCTCGCGGATGCCAGCAGTGGCGC
ATTCCTTCTCCTGCACAAGGAGGTGCAGATCAAGCGATTGAAGCCTGGATCGGAGCGCATCACTGTCTCGCTCGTCGTTC
ACAACGCGGGATCCACCACAGCGTATGATGTGAGCTTGATCGACGATTCGTGGCCCAGTTCTTATTTCAATGTCGTGTCC
GGGGACACATCCACAGCATGGGAGAAGCTAGAAGTTGGAAAGTCCCTGCAGCATTCGTTTGTCTTGGAGCCCAAAACCAA
GGGTTCGTTTCAAGCCGCTCCCGCGGTCGTGAAGTATCGCGTGGCGGCCAAATCAGCGCTACAGGAAGCATGGTCTACTC
CACTGCCGCCGCTGGACACTCTCTCCGACAAACCAAGTGGGATCAAATACGATTTCATCAAGAACATCGCGTTGAAATAC
GGCCCTCTTGTGTCGGTGCTTTCCATCGTGGGGATCTTCGTGTACCTGATGGTGGCTCCTTCCAGCTCCAAAAAGTCCAA
GAGCAAGAAGCGCCGCTAA