
Microexon ID | Sm_GL377604:1450530-1450535:- |
Species | Selaginella moellendorffii | Coordinates | GL377604:1450530..1450535 |
Microexon Cluster ID | MEP11 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | TRAP_beta |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Sm_GL377604:1450530-1450535:- does not have available information here.
Sm_GL377604:1450530-1450535:- does not have available information here.
Microexon DNA seq | ATCAAG |
Microexon Amino Acid seq | IK |
Microexon-tag DNA Seq | CCGCCGCTGGACACTCTCTCCGACAAACCAAGTGGGATCAAATACGATTTCATCAAGAACATCGCGTTGAAATACGGCCCTCTTGTGTCGGTGCTTTCCATCGTGGGG |
Microexon-tag Amino Acid seq | PPLDTLSDKPSGIKYDFIKNIALKYGPLVSVLSIVG |
Transcript ID | Sm.17886.1 |
Gene ID | Sm.17886 |
Gene Name | NA |
Pfam domain motif | TRAP_beta |
Motif E-value | 2.8e-38 |
Motif start | 16 |
Motif end | 188 |
Protein seq | >Sm.17886.1 MAGAALVFAFVALLGAVGALADAGSGAFLLLHKEVQIKRLKPGSERITVSLVVHNAGSTTAYDVSLIDDSWPSSYFNVVS GDTSTAWEKLEVGKSLQHSFVLEPKTKGSFQAAPAVVKYRVAAKSALQEAWSTPLPPLDTLSDKPSGIKYDFIKNIALKY GPLVSVLSIVGIFVYLMVAPSSSKKPKSKKRR* |
CDS seq | >Sm.17886.1 ATGGCTGGAGCGGCGCTCGTCTTCGCATTCGTGGCGCTACTCGGCGCCGTGGGAGCGCTCGCGGATGCCGGCAGTGGTGC GTTCCTTCTCCTGCACAAGGAGGTGCAGATCAAGCGATTGAAGCCTGGATCGGAGCGCATCACTGTCTCGCTCGTCGTTC ACAACGCGGGATCCACCACAGCGTATGATGTGAGCTTGATCGACGATTCGTGGCCCAGTTCTTACTTCAATGTCGTGTCC GGGGACACATCCACAGCATGGGAGAAGCTAGAAGTTGGAAAGTCCCTGCAGCATTCGTTTGTCTTGGAGCCCAAAACCAA GGGTTCGTTCCAAGCCGCTCCCGCGGTCGTGAAGTATCGCGTGGCGGCCAAATCAGCGCTACAGGAAGCATGGTCTACTC CACTGCCGCCGCTGGACACTCTCTCCGACAAACCAAGTGGGATCAAATACGATTTCATCAAGAACATCGCGTTGAAATAC GGCCCTCTTGTGTCGGTGCTTTCCATCGTGGGGATCTTCGTGTACCTGATGGTGGCTCCTTCCAGCTCCAAAAAGCCCAA GAGCAAGAAGCGCCGGTAA |