Microexon ID Sm_GL377604:1450530-1450535:-
Species Selaginella moellendorffii
Coordinates GL377604:1450530..1450535
Microexon Cluster ID MEP11
Size 6
Phase 0
Pfam Domain Motif TRAP_beta
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Sm_GL377604:1450530-1450535:- does not have available information here.
Sm_GL377604:1450530-1450535:- does not have available information here.
Microexon DNA seq ATCAAG
Microexon Amino Acid seq IK
Microexon-tag DNA Seq CCGCCGCTGGACACTCTCTCCGACAAACCAAGTGGGATCAAATACGATTTCATCAAGAACATCGCGTTGAAATACGGCCCTCTTGTGTCGGTGCTTTCCATCGTGGGG
Microexon-tag Amino Acid seq PPLDTLSDKPSGIKYDFIKNIALKYGPLVSVLSIVG
Transcript ID Sm.17886.1
Gene ID Sm.17886
Gene Name NA
Pfam domain motif TRAP_beta
Motif E-value 2.8e-38
Motif start 16
Motif end 188
Protein seq >Sm.17886.1
MAGAALVFAFVALLGAVGALADAGSGAFLLLHKEVQIKRLKPGSERITVSLVVHNAGSTTAYDVSLIDDSWPSSYFNVVS
GDTSTAWEKLEVGKSLQHSFVLEPKTKGSFQAAPAVVKYRVAAKSALQEAWSTPLPPLDTLSDKPSGIKYDFIKNIALKY
GPLVSVLSIVGIFVYLMVAPSSSKKPKSKKRR*
CDS seq >Sm.17886.1
ATGGCTGGAGCGGCGCTCGTCTTCGCATTCGTGGCGCTACTCGGCGCCGTGGGAGCGCTCGCGGATGCCGGCAGTGGTGC
GTTCCTTCTCCTGCACAAGGAGGTGCAGATCAAGCGATTGAAGCCTGGATCGGAGCGCATCACTGTCTCGCTCGTCGTTC
ACAACGCGGGATCCACCACAGCGTATGATGTGAGCTTGATCGACGATTCGTGGCCCAGTTCTTACTTCAATGTCGTGTCC
GGGGACACATCCACAGCATGGGAGAAGCTAGAAGTTGGAAAGTCCCTGCAGCATTCGTTTGTCTTGGAGCCCAAAACCAA
GGGTTCGTTCCAAGCCGCTCCCGCGGTCGTGAAGTATCGCGTGGCGGCCAAATCAGCGCTACAGGAAGCATGGTCTACTC
CACTGCCGCCGCTGGACACTCTCTCCGACAAACCAAGTGGGATCAAATACGATTTCATCAAGAACATCGCGTTGAAATAC
GGCCCTCTTGTGTCGGTGCTTTCCATCGTGGGGATCTTCGTGTACCTGATGGTGGCTCCTTCCAGCTCCAAAAAGCCCAA
GAGCAAGAAGCGCCGGTAA