
Microexon ID | Ps_NC_039362.1:36464623-36464628:- |
Species | Papaver somniferum | Coordinates | NC_039362.1:36464623..36464628 |
Microexon Cluster ID | MEP11 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | TRAP_beta |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCAAAG |
Microexon Amino Acid seq | AK |
Microexon-tag DNA Seq | CTGCCTTTGGAAATTCTTGCTGATAGACCTCCAGAGAAGAAGTTTGAATGGGCAAAGAGATTATTGGCAAAATACGGATCACTTGTTTCTGTCCTCACCATTGTGGTC |
Microexon-tag Amino Acid Seq | MPLEILADRPPEKKFEWAKRLLAKYGSLVSVLTIVV |
Microexon-tag spanning region | 36463982-36464791 |
Microexon-tag prediction score | 0.9643 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026530112.1x |
Reference Transcript ID | XM_026530112.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026530112.1 |
Protein ID | XP_026385897.1 |
Gene ID | LOC113281389 |
Gene Name | NA |
Pfam domain motif | TRAP_beta |
Motif E-value | 6.1e-50 |
Motif start | 14 |
Motif end | 185 |
Protein seq | >XP_026385897.1 MNSKMMAAISVMMCLLSISATFASSDSPFIVANKKVSLNRLKSGIERVSVSIDIYNQGSATAYDVSLTDGEWSPSIFNLV SGNTSKSWEKLDVGSVVSHSFVLESNVKGAYHASPAVIKFRTPTKASLQEAFSSPILPLEILADRPPEKKFEWAKRLLAK YGSLVSVLTIVVSFIYLVASPSKSSGGKAGKKRR* |
CDS seq | >XM_026530112.1 ATGAATTCAAAGATGATGGCTGCAATCTCAGTTATGATGTGTTTGTTGTCCATTTCTGCTACTTTTGCAAGTAGTGATTC TCCTTTCATCGTTGCAAACAAGAAAGTTAGTCTCAATAGGCTCAAATCTGGAATTGAACGTGTTTCTGTCTCCATCGATA TCTATAATCAAGGATCCGCGACTGCTTATGATGTAAGTCTTACCGATGGCGAGTGGTCACCATCAATCTTCAACTTAGTC AGCGGGAACACTTCCAAGTCATGGGAAAAGCTCGATGTTGGTTCTGTTGTTTCTCACTCTTTTGTTCTGGAGTCCAATGT GAAAGGCGCATACCATGCCTCCCCTGCTGTCATAAAATTCAGAACTCCTACGAAGGCATCTCTACAGGAGGCGTTCTCAT CCCCCATCCTGCCTTTGGAAATTCTTGCTGATAGACCTCCAGAGAAGAAGTTTGAATGGGCAAAGAGATTATTGGCAAAA TACGGATCACTTGTTTCTGTCCTCACCATTGTGGTCTCATTCATATACCTGGTTGCCTCGCCATCAAAATCCAGCGGTGG AAAGGCGGGCAAGAAAAGACGTTAA |
Microexon DNA seq | GCAAAG |
Microexon Amino Acid seq | AK |
Microexon-tag DNA Seq | CTGCCTTTGGAAATTCTTGCTGATAGACCTCCAGAGAAGAAGTTTGAATGGGCAAAGAGATTATTGGCAAAATACGGATCACTTGTTTCTGTCCTCACCATTGTGGTC |
Microexon-tag Amino Acid seq | MPLEILADRPPEKKFEWAKRLLAKYGSLVSVLTIVV |
Transcript ID | XM_026530112.1 |
Gene ID | Ps.28005 |
Gene Name | NA |
Pfam domain motif | TRAP_beta |
Motif E-value | 6.2e-50 |
Motif start | 14 |
Motif end | 185 |
Protein seq | >XM_026530112.1 MNSKMMAAISVMMCLLSISATFASSDSPFIVANKKVSLNRLKSGIERVSVSIDIYNQGSATAYDVSLTDGEWSPSIFNLV SGNTSKSWEKLDVGSVVSHSFVLESNVKGAYHASPAVIKFRTPTKASLQEAFSSPILPLEILADRPPEKKFEWAKRLLAK YGSLVSVLTIVVSFIYLVASPSKSSGGKAGKKRR* |
CDS seq | >XM_026530112.1 ATGAATTCAAAGATGATGGCTGCAATCTCAGTTATGATGTGTTTGTTGTCCATTTCTGCTACTTTTGCAAGTAGTGATTC TCCTTTCATCGTTGCAAACAAGAAAGTTAGTCTCAATAGGCTCAAATCTGGAATTGAACGTGTTTCTGTCTCCATCGATA TCTATAATCAAGGATCCGCGACTGCTTATGATGTAAGTCTTACCGATGGCGAGTGGTCACCATCAATCTTCAACTTAGTC AGCGGGAACACTTCCAAGTCATGGGAAAAGCTCGATGTTGGTTCTGTTGTTTCTCACTCTTTTGTTCTGGAGTCCAATGT GAAAGGCGCATACCATGCCTCCCCTGCTGTCATAAAATTCAGAACTCCTACGAAGGCATCTCTACAGGAGGCGTTCTCAT CCCCCATCCTGCCTTTGGAAATTCTTGCTGATAGACCTCCAGAGAAGAAGTTTGAATGGGCAAAGAGATTATTGGCAAAA TACGGATCACTTGTTTCTGTCCTCACCATTGTGGTCTCATTCATATACCTGGTTGCCTCGCCATCAAAATCCAGCGGTGG AAAGGCGGGCAAGAAAAGACGTTAA |