Microexon ID Ps_NC_039362.1:36464623-36464628:-
Species Papaver somniferum
Coordinates NC_039362.1:36464623..36464628
Microexon Cluster ID MEP11
Size 6
Phase 0
Pfam Domain Motif TRAP_beta
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCAAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq CTGCCTTTGGAAATTCTTGCTGATAGACCTCCAGAGAAGAAGTTTGAATGGGCAAAGAGATTATTGGCAAAATACGGATCACTTGTTTCTGTCCTCACCATTGTGGTC
Microexon-tag Amino Acid Seq MPLEILADRPPEKKFEWAKRLLAKYGSLVSVLTIVV
Microexon-tag spanning region36463982-36464791
Microexon-tag prediction score0.9643
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026530112.1x
Reference Transcript ID XM_026530112.1
Gene ID NA
Gene Name NA
Transcript ID XM_026530112.1
Protein ID XP_026385897.1
Gene ID LOC113281389
Gene Name NA
Pfam domain motif TRAP_beta
Motif E-value 6.1e-50
Motif start 14
Motif end 185
Protein seq >XP_026385897.1
MNSKMMAAISVMMCLLSISATFASSDSPFIVANKKVSLNRLKSGIERVSVSIDIYNQGSATAYDVSLTDGEWSPSIFNLV
SGNTSKSWEKLDVGSVVSHSFVLESNVKGAYHASPAVIKFRTPTKASLQEAFSSPILPLEILADRPPEKKFEWAKRLLAK
YGSLVSVLTIVVSFIYLVASPSKSSGGKAGKKRR*
CDS seq >XM_026530112.1
ATGAATTCAAAGATGATGGCTGCAATCTCAGTTATGATGTGTTTGTTGTCCATTTCTGCTACTTTTGCAAGTAGTGATTC
TCCTTTCATCGTTGCAAACAAGAAAGTTAGTCTCAATAGGCTCAAATCTGGAATTGAACGTGTTTCTGTCTCCATCGATA
TCTATAATCAAGGATCCGCGACTGCTTATGATGTAAGTCTTACCGATGGCGAGTGGTCACCATCAATCTTCAACTTAGTC
AGCGGGAACACTTCCAAGTCATGGGAAAAGCTCGATGTTGGTTCTGTTGTTTCTCACTCTTTTGTTCTGGAGTCCAATGT
GAAAGGCGCATACCATGCCTCCCCTGCTGTCATAAAATTCAGAACTCCTACGAAGGCATCTCTACAGGAGGCGTTCTCAT
CCCCCATCCTGCCTTTGGAAATTCTTGCTGATAGACCTCCAGAGAAGAAGTTTGAATGGGCAAAGAGATTATTGGCAAAA
TACGGATCACTTGTTTCTGTCCTCACCATTGTGGTCTCATTCATATACCTGGTTGCCTCGCCATCAAAATCCAGCGGTGG
AAAGGCGGGCAAGAAAAGACGTTAA
Microexon DNA seq GCAAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq CTGCCTTTGGAAATTCTTGCTGATAGACCTCCAGAGAAGAAGTTTGAATGGGCAAAGAGATTATTGGCAAAATACGGATCACTTGTTTCTGTCCTCACCATTGTGGTC
Microexon-tag Amino Acid seq MPLEILADRPPEKKFEWAKRLLAKYGSLVSVLTIVV
Transcript ID XM_026530112.1
Gene ID Ps.28005
Gene Name NA
Pfam domain motif TRAP_beta
Motif E-value 6.2e-50
Motif start 14
Motif end 185
Protein seq >XM_026530112.1
MNSKMMAAISVMMCLLSISATFASSDSPFIVANKKVSLNRLKSGIERVSVSIDIYNQGSATAYDVSLTDGEWSPSIFNLV
SGNTSKSWEKLDVGSVVSHSFVLESNVKGAYHASPAVIKFRTPTKASLQEAFSSPILPLEILADRPPEKKFEWAKRLLAK
YGSLVSVLTIVVSFIYLVASPSKSSGGKAGKKRR*
CDS seq >XM_026530112.1
ATGAATTCAAAGATGATGGCTGCAATCTCAGTTATGATGTGTTTGTTGTCCATTTCTGCTACTTTTGCAAGTAGTGATTC
TCCTTTCATCGTTGCAAACAAGAAAGTTAGTCTCAATAGGCTCAAATCTGGAATTGAACGTGTTTCTGTCTCCATCGATA
TCTATAATCAAGGATCCGCGACTGCTTATGATGTAAGTCTTACCGATGGCGAGTGGTCACCATCAATCTTCAACTTAGTC
AGCGGGAACACTTCCAAGTCATGGGAAAAGCTCGATGTTGGTTCTGTTGTTTCTCACTCTTTTGTTCTGGAGTCCAATGT
GAAAGGCGCATACCATGCCTCCCCTGCTGTCATAAAATTCAGAACTCCTACGAAGGCATCTCTACAGGAGGCGTTCTCAT
CCCCCATCCTGCCTTTGGAAATTCTTGCTGATAGACCTCCAGAGAAGAAGTTTGAATGGGCAAAGAGATTATTGGCAAAA
TACGGATCACTTGTTTCTGTCCTCACCATTGTGGTCTCATTCATATACCTGGTTGCCTCGCCATCAAAATCCAGCGGTGG
AAAGGCGGGCAAGAAAAGACGTTAA