
Microexon ID | Ps_NC_039362.1:20552696-20552701:- |
Species | Papaver somniferum | Coordinates | NC_039362.1:20552696..20552701 |
Microexon Cluster ID | MEP11 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | TRAP_beta |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCAAAG |
Microexon Amino Acid seq | AK |
Microexon-tag DNA Seq | CTAACTTTGGATGTCCTTGCTGACAGACCAGCAGAAAAGAAAATTGACTTGGCAAAGAGGTTGTTGACAAAATATGGGTCACTCGTTACCGTGATCTCCGTGGTGGTA |
Microexon-tag Amino Acid Seq | LTLDVLADRPAEKKIDLAKRLLTKYGSLVTVISVVV |
Microexon-tag spanning region | 20552533-20552883 |
Microexon-tag prediction score | 0.9213 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026529766.1x |
Reference Transcript ID | XM_026529766.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026529766.1 |
Protein ID | XP_026385551.1 |
Gene ID | LOC113281117 |
Gene Name | NA |
Pfam domain motif | TRAP_beta |
Motif E-value | 1.5e-45 |
Motif start | 26 |
Motif end | 189 |
Protein seq | >XP_026385551.1 MANLKISTLCLFFLLSASSLGSCLGDGVFIVAHKKVSLNKLRSGMERVSVTIDIYNRGSETAYDVSLTDDSWPHHIFDIA KGNFSKSWESLDAGSAVSHSFDLVSQVKGIFNGESAIIKFRVPTKAALQVAYSNPMLTLDVLADRPAEKKIDLAKRLLTK YGSLVTVISVVVTFVYLVATPSKSGSAKSGKKRR* |
CDS seq | >XM_026529766.1 ATGGCGAACCTAAAAATCAGTACTCTCTGTCTCTTCTTCTTGCTGTCTGCATCGTCATTAGGGAGTTGTTTAGGAGATGG CGTATTCATTGTTGCTCACAAGAAAGTGAGTCTTAACAAGCTTAGATCTGGTATGGAACGAGTCTCTGTTACTATCGACA TTTACAATCGTGGATCTGAGACTGCATATGATGTAAGTCTTACTGATGATAGCTGGCCTCATCATATCTTTGATATTGCT AAAGGCAACTTTTCCAAATCATGGGAAAGTCTCGATGCTGGCTCTGCTGTTTCTCACTCTTTTGATTTGGTTTCCCAAGT CAAAGGGATATTCAATGGTGAATCTGCAATTATTAAATTCCGTGTGCCCACGAAGGCAGCTCTACAGGTGGCTTACTCGA ATCCGATGCTAACTTTGGATGTCCTTGCTGACAGACCAGCAGAAAAGAAAATTGACTTGGCAAAGAGGTTGTTGACAAAA TATGGGTCACTCGTTACCGTGATCTCCGTGGTGGTAACGTTTGTATACCTTGTTGCCACTCCATCAAAATCTGGCAGTGC TAAGTCAGGCAAGAAAAGACGTTGA |
Microexon DNA seq | GCAAAG |
Microexon Amino Acid seq | AK |
Microexon-tag DNA Seq | CTAACTTTGGATGTCCTTGCTGACAGACCAGCAGAAAAGAAAATTGACTTGGCAAAGAGGTTGTTGACAAAATATGGGTCACTCGTTACCGTGATCTCCGTGGTGGTA |
Microexon-tag Amino Acid seq | LTLDVLADRPAEKKIDLAKRLLTKYGSLVTVISVVV |
Transcript ID | XM_026529766.1 |
Gene ID | Ps.27603 |
Gene Name | NA |
Pfam domain motif | TRAP_beta |
Motif E-value | 1.5e-45 |
Motif start | 26 |
Motif end | 189 |
Protein seq | >XM_026529766.1 MANLKISTLCLFFLLSASSLGSCLGDGVFIVAHKKVSLNKLRSGMERVSVTIDIYNRGSETAYDVSLTDDSWPHHIFDIA KGNFSKSWESLDAGSAVSHSFDLVSQVKGIFNGESAIIKFRVPTKAALQVAYSNPMLTLDVLADRPAEKKIDLAKRLLTK YGSLVTVISVVVTFVYLVATPSKSGSAKSGKKRR* |
CDS seq | >XM_026529766.1 ATGGCGAACCTAAAAATCAGTACTCTCTGTCTCTTCTTCTTGCTGTCTGCATCGTCATTAGGGAGTTGTTTAGGAGATGG CGTATTCATTGTTGCTCACAAGAAAGTGAGTCTTAACAAGCTTAGATCTGGTATGGAACGAGTCTCTGTTACTATCGACA TTTACAATCGTGGATCTGAGACTGCATATGATGTAAGTCTTACTGATGATAGCTGGCCTCATCATATCTTTGATATTGCT AAAGGCAACTTTTCCAAATCATGGGAAAGTCTCGATGCTGGCTCTGCTGTTTCTCACTCTTTTGATTTGGTTTCCCAAGT CAAAGGGATATTCAATGGTGAATCTGCAATTATTAAATTCCGTGTGCCCACGAAGGCAGCTCTACAGGTGGCTTACTCGA ATCCGATGCTAACTTTGGATGTCCTTGCTGACAGACCAGCAGAAAAGAAAATTGACTTGGCAAAGAGGTTGTTGACAAAA TATGGGTCACTCGTTACCGTGATCTCCGTGGTGGTAACGTTTGTATACCTTGTTGCCACTCCATCAAAATCTGGCAGTGC TAAGTCAGGCAAGAAAAGACGTTGA |