Microexon ID Ps_NC_039362.1:20552696-20552701:-
Species Papaver somniferum
Coordinates NC_039362.1:20552696..20552701
Microexon Cluster ID MEP11
Size 6
Phase 0
Pfam Domain Motif TRAP_beta
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCAAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq CTAACTTTGGATGTCCTTGCTGACAGACCAGCAGAAAAGAAAATTGACTTGGCAAAGAGGTTGTTGACAAAATATGGGTCACTCGTTACCGTGATCTCCGTGGTGGTA
Microexon-tag Amino Acid Seq LTLDVLADRPAEKKIDLAKRLLTKYGSLVTVISVVV
Microexon-tag spanning region20552533-20552883
Microexon-tag prediction score0.9213
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026529766.1x
Reference Transcript ID XM_026529766.1
Gene ID NA
Gene Name NA
Transcript ID XM_026529766.1
Protein ID XP_026385551.1
Gene ID LOC113281117
Gene Name NA
Pfam domain motif TRAP_beta
Motif E-value 1.5e-45
Motif start 26
Motif end 189
Protein seq >XP_026385551.1
MANLKISTLCLFFLLSASSLGSCLGDGVFIVAHKKVSLNKLRSGMERVSVTIDIYNRGSETAYDVSLTDDSWPHHIFDIA
KGNFSKSWESLDAGSAVSHSFDLVSQVKGIFNGESAIIKFRVPTKAALQVAYSNPMLTLDVLADRPAEKKIDLAKRLLTK
YGSLVTVISVVVTFVYLVATPSKSGSAKSGKKRR*
CDS seq >XM_026529766.1
ATGGCGAACCTAAAAATCAGTACTCTCTGTCTCTTCTTCTTGCTGTCTGCATCGTCATTAGGGAGTTGTTTAGGAGATGG
CGTATTCATTGTTGCTCACAAGAAAGTGAGTCTTAACAAGCTTAGATCTGGTATGGAACGAGTCTCTGTTACTATCGACA
TTTACAATCGTGGATCTGAGACTGCATATGATGTAAGTCTTACTGATGATAGCTGGCCTCATCATATCTTTGATATTGCT
AAAGGCAACTTTTCCAAATCATGGGAAAGTCTCGATGCTGGCTCTGCTGTTTCTCACTCTTTTGATTTGGTTTCCCAAGT
CAAAGGGATATTCAATGGTGAATCTGCAATTATTAAATTCCGTGTGCCCACGAAGGCAGCTCTACAGGTGGCTTACTCGA
ATCCGATGCTAACTTTGGATGTCCTTGCTGACAGACCAGCAGAAAAGAAAATTGACTTGGCAAAGAGGTTGTTGACAAAA
TATGGGTCACTCGTTACCGTGATCTCCGTGGTGGTAACGTTTGTATACCTTGTTGCCACTCCATCAAAATCTGGCAGTGC
TAAGTCAGGCAAGAAAAGACGTTGA
Microexon DNA seq GCAAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq CTAACTTTGGATGTCCTTGCTGACAGACCAGCAGAAAAGAAAATTGACTTGGCAAAGAGGTTGTTGACAAAATATGGGTCACTCGTTACCGTGATCTCCGTGGTGGTA
Microexon-tag Amino Acid seq LTLDVLADRPAEKKIDLAKRLLTKYGSLVTVISVVV
Transcript ID XM_026529766.1
Gene ID Ps.27603
Gene Name NA
Pfam domain motif TRAP_beta
Motif E-value 1.5e-45
Motif start 26
Motif end 189
Protein seq >XM_026529766.1
MANLKISTLCLFFLLSASSLGSCLGDGVFIVAHKKVSLNKLRSGMERVSVTIDIYNRGSETAYDVSLTDDSWPHHIFDIA
KGNFSKSWESLDAGSAVSHSFDLVSQVKGIFNGESAIIKFRVPTKAALQVAYSNPMLTLDVLADRPAEKKIDLAKRLLTK
YGSLVTVISVVVTFVYLVATPSKSGSAKSGKKRR*
CDS seq >XM_026529766.1
ATGGCGAACCTAAAAATCAGTACTCTCTGTCTCTTCTTCTTGCTGTCTGCATCGTCATTAGGGAGTTGTTTAGGAGATGG
CGTATTCATTGTTGCTCACAAGAAAGTGAGTCTTAACAAGCTTAGATCTGGTATGGAACGAGTCTCTGTTACTATCGACA
TTTACAATCGTGGATCTGAGACTGCATATGATGTAAGTCTTACTGATGATAGCTGGCCTCATCATATCTTTGATATTGCT
AAAGGCAACTTTTCCAAATCATGGGAAAGTCTCGATGCTGGCTCTGCTGTTTCTCACTCTTTTGATTTGGTTTCCCAAGT
CAAAGGGATATTCAATGGTGAATCTGCAATTATTAAATTCCGTGTGCCCACGAAGGCAGCTCTACAGGTGGCTTACTCGA
ATCCGATGCTAACTTTGGATGTCCTTGCTGACAGACCAGCAGAAAAGAAAATTGACTTGGCAAAGAGGTTGTTGACAAAA
TATGGGTCACTCGTTACCGTGATCTCCGTGGTGGTAACGTTTGTATACCTTGTTGCCACTCCATCAAAATCTGGCAGTGC
TAAGTCAGGCAAGAAAAGACGTTGA