
Microexon ID | Ps_NC_039361.1:150550745-150550750:+ |
Species | Papaver somniferum | Coordinates | NC_039361.1:150550745..150550750 |
Microexon Cluster ID | MEP11 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | TRAP_beta |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCAAAG |
Microexon Amino Acid seq | AK |
Microexon-tag DNA Seq | CTACCTTTGGATATCCTTGCTGACAGACCAGCAGAAAAGAAAATTGACTTGGCAAAGAGGTTGTTGACAAAATATGGGTCACTCGTTACCGTGATCTCCGTGGTGGTA |
Microexon-tag Amino Acid Seq | LPLDILADRPAEKKIDLAKRLLTKYGSLVTVISVVV |
Microexon-tag spanning region | 150550563-150550916 |
Microexon-tag prediction score | 0.9318 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026521463.1x |
Reference Transcript ID | XM_026521463.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026521463.1 |
Protein ID | XP_026377248.1 |
Gene ID | LOC113271568 |
Gene Name | NA |
Pfam domain motif | TRAP_beta |
Motif E-value | 4.5e-46 |
Motif start | 26 |
Motif end | 188 |
Protein seq | >XP_026377248.1 MANLRISTLCLFFLLSVSTLGSCLGDGVFIVAHKKVSLNKLRSGMERVSVTIDIYNRGSETAYDVSLTDDSWPHHIFDIA KGNFSKSWESLDAGSAVSHSFDLVSQVKGIFNGESAIIKFRVPTKAALQVAYSNPMLPLDILADRPAEKKIDLAKRLLTK YGSLVTVISVVVTFVYLVATPSKSGGAKSGKKRR* |
CDS seq | >XM_026521463.1 ATGGCGAACCTGAGAATCAGTACTCTCTGTCTCTTCTTCTTGTTGTCTGTGTCGACATTAGGGAGTTGTTTAGGAGATGG AGTATTCATTGTTGCTCACAAGAAAGTGAGTCTTAACAAGCTTAGATCTGGTATGGAACGAGTTTCTGTTACTATCGACA TTTACAATCGTGGATCTGAGACTGCATATGATGTAAGTCTTACTGATGATAGCTGGCCTCATCATATCTTTGATATTGCT AAAGGCAACTTTTCCAAATCATGGGAAAGTCTCGATGCTGGCTCTGCTGTTTCTCACTCTTTTGATTTGGTTTCCCAAGT CAAAGGGATATTCAATGGTGAATCTGCGATTATTAAATTCCGTGTGCCCACGAAGGCAGCTCTACAGGTGGCTTACTCGA ATCCGATGCTACCTTTGGATATCCTTGCTGACAGACCAGCAGAAAAGAAAATTGACTTGGCAAAGAGGTTGTTGACAAAA TATGGGTCACTCGTTACCGTGATCTCCGTGGTGGTAACGTTTGTATACCTTGTTGCCACTCCATCAAAATCTGGAGGTGC TAAGTCGGGCAAGAAAAGACGTTGA |
Microexon DNA seq | GCAAAG |
Microexon Amino Acid seq | AK |
Microexon-tag DNA Seq | CTACCTTTGGATATCCTTGCTGACAGACCAGCAGAAAAGAAAATTGACTTGGCAAAGAGGTTGTTGACAAAATATGGGTCACTCGTTACCGTGATCTCCGTGGTGGTA |
Microexon-tag Amino Acid seq | LPLDILADRPAEKKIDLAKRLLTKYGSLVTVISVVV |
Transcript ID | XM_026521463.1 |
Gene ID | Ps.26577 |
Gene Name | NA |
Pfam domain motif | TRAP_beta |
Motif E-value | 4.5e-46 |
Motif start | 26 |
Motif end | 188 |
Protein seq | >XM_026521463.1 MANLRISTLCLFFLLSVSTLGSCLGDGVFIVAHKKVSLNKLRSGMERVSVTIDIYNRGSETAYDVSLTDDSWPHHIFDIA KGNFSKSWESLDAGSAVSHSFDLVSQVKGIFNGESAIIKFRVPTKAALQVAYSNPMLPLDILADRPAEKKIDLAKRLLTK YGSLVTVISVVVTFVYLVATPSKSGGAKSGKKRR* |
CDS seq | >XM_026521463.1 ATGGCGAACCTGAGAATCAGTACTCTCTGTCTCTTCTTCTTGTTGTCTGTGTCGACATTAGGGAGTTGTTTAGGAGATGG AGTATTCATTGTTGCTCACAAGAAAGTGAGTCTTAACAAGCTTAGATCTGGTATGGAACGAGTTTCTGTTACTATCGACA TTTACAATCGTGGATCTGAGACTGCATATGATGTAAGTCTTACTGATGATAGCTGGCCTCATCATATCTTTGATATTGCT AAAGGCAACTTTTCCAAATCATGGGAAAGTCTCGATGCTGGCTCTGCTGTTTCTCACTCTTTTGATTTGGTTTCCCAAGT CAAAGGGATATTCAATGGTGAATCTGCGATTATTAAATTCCGTGTGCCCACGAAGGCAGCTCTACAGGTGGCTTACTCGA ATCCGATGCTACCTTTGGATATCCTTGCTGACAGACCAGCAGAAAAGAAAATTGACTTGGCAAAGAGGTTGTTGACAAAA TATGGGTCACTCGTTACCGTGATCTCCGTGGTGGTAACGTTTGTATACCTTGTTGCCACTCCATCAAAATCTGGAGGTGC TAAGTCGGGCAAGAAAAGACGTTGA |