Microexon ID Ps_NC_039361.1:138658840-138658845:-
Species Papaver somniferum
Coordinates NC_039361.1:138658840..138658845
Microexon Cluster ID MEP11
Size 6
Phase 0
Pfam Domain Motif TRAP_beta
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCAAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq CTGCCTTTGGAAATTCTTGCTGATAGACCTCCAGAGAAGAAGTTTGAATGGGCAAAGAGATTATTGGCAAAATACGGATCACTTGTTTCTGTCCTCACCATTGTGGTC
Microexon-tag Amino Acid Seq MPLEILADRPPEKKFEWAKRLLAKYGSLVSVLTIVV
Microexon-tag spanning region138658200-138659008
Microexon-tag prediction score0.9643
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026605302.1x
Reference Transcript ID XM_026605302.1
Gene ID NA
Gene Name NA
Transcript ID XM_026605302.1
Protein ID XP_026461087.1
Gene ID LOC113362807
Gene Name NA
Pfam domain motif TRAP_beta
Motif E-value 6.3e-50
Motif start 14
Motif end 185
Protein seq >XP_026461087.1
MNSKMMAAISVMMCLLSISATFASSDSPFIVANKKVSLNRLKSGIERISVSIDIYNQGSATAYDVSLTDGEWSPSIFNLV
SGNTSKSWEKLDVGSVVSHSFVLESNVKGVYHASPAVIKFRTPTKASLQEAFSSPILPLEILADRPPEKKFEWAKRLLAK
YGSLVSVLTIVVSFIYLVASPSKSSGGKAGKKRR*
CDS seq >XM_026605302.1
ATGAATTCAAAGATGATGGCTGCAATCTCAGTTATGATGTGTTTGTTGTCCATTTCTGCTACTTTTGCAAGTAGTGATTC
TCCTTTCATCGTTGCAAACAAGAAAGTTAGTCTCAATAGGCTCAAATCTGGAATTGAACGTATTTCTGTCTCCATCGATA
TCTATAATCAAGGATCCGCGACTGCTTATGATGTAAGTCTTACTGATGGCGAGTGGTCACCATCAATCTTCAACTTAGTC
AGCGGGAACACTTCCAAGTCATGGGAAAAGCTCGATGTTGGTTCTGTTGTTTCTCACTCTTTTGTTCTGGAGTCCAATGT
GAAAGGCGTATACCATGCCTCCCCTGCTGTCATAAAATTCAGAACTCCTACGAAGGCATCTCTACAGGAGGCGTTCTCAT
CCCCCATCCTGCCTTTGGAAATTCTTGCTGATAGACCTCCAGAGAAGAAGTTTGAATGGGCAAAGAGATTATTGGCAAAA
TACGGATCACTTGTTTCTGTCCTCACCATTGTGGTCTCATTCATATACCTGGTTGCCTCGCCATCAAAATCCAGCGGTGG
AAAGGCGGGCAAGAAAAGACGTTAA
Microexon DNA seq GCAAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq CTGCCTTTGGAAATTCTTGCTGATAGACCTCCAGAGAAGAAGTTTGAATGGGCAAAGAGATTATTGGCAAAATACGGATCACTTGTTTCTGTCCTCACCATTGTGGTC
Microexon-tag Amino Acid seq MPLEILADRPPEKKFEWAKRLLAKYGSLVSVLTIVV
Transcript ID XM_026605302.1
Gene ID Ps.26233
Gene Name NA
Pfam domain motif TRAP_beta
Motif E-value 6.4e-50
Motif start 14
Motif end 185
Protein seq >XM_026605302.1
MNSKMMAAISVMMCLLSISATFASSDSPFIVANKKVSLNRLKSGIERISVSIDIYNQGSATAYDVSLTDGEWSPSIFNLV
SGNTSKSWEKLDVGSVVSHSFVLESNVKGVYHASPAVIKFRTPTKASLQEAFSSPILPLEILADRPPEKKFEWAKRLLAK
YGSLVSVLTIVVSFIYLVASPSKSSGGKAGKKRR*
CDS seq >XM_026605302.1
ATGAATTCAAAGATGATGGCTGCAATCTCAGTTATGATGTGTTTGTTGTCCATTTCTGCTACTTTTGCAAGTAGTGATTC
TCCTTTCATCGTTGCAAACAAGAAAGTTAGTCTCAATAGGCTCAAATCTGGAATTGAACGTATTTCTGTCTCCATCGATA
TCTATAATCAAGGATCCGCGACTGCTTATGATGTAAGTCTTACTGATGGCGAGTGGTCACCATCAATCTTCAACTTAGTC
AGCGGGAACACTTCCAAGTCATGGGAAAAGCTCGATGTTGGTTCTGTTGTTTCTCACTCTTTTGTTCTGGAGTCCAATGT
GAAAGGCGTATACCATGCCTCCCCTGCTGTCATAAAATTCAGAACTCCTACGAAGGCATCTCTACAGGAGGCGTTCTCAT
CCCCCATCCTGCCTTTGGAAATTCTTGCTGATAGACCTCCAGAGAAGAAGTTTGAATGGGCAAAGAGATTATTGGCAAAA
TACGGATCACTTGTTTCTGTCCTCACCATTGTGGTCTCATTCATATACCTGGTTGCCTCGCCATCAAAATCCAGCGGTGG
AAAGGCGGGCAAGAAAAGACGTTAA