Microexon ID Ha_17:68371464-68371469:-
Species Helianthus annuus
Coordinates 17:68371464..68371469
Microexon Cluster ID MEP11
Size 6
Phase 0
Pfam Domain Motif TRAP_beta
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCTAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq CTACCTCTTGAAATCCTATCAGATAAGCCTAAGGCGAGCGCACTTCATCTTGCTAAGAGAATGTTGGGTAATTATGGGTCGCTGGTATCTGTGATCTCCATTATGGTC
Microexon-tag Amino Acid Seq LPLEILSDKPKASALHLAKRMLGNYGSLVSVISIMV
Microexon-tag spanning region68371306-68371630
Microexon-tag prediction score0.8978
Overlapped with the annotated transcript (%) 100
New Transcript ID OTF86443x
Reference Transcript ID OTF86443
Gene ID HannXRQ_Chr17g0550841
Gene Name NA
Transcript ID OTF86443
Protein ID OTF86443
Gene ID HannXRQ_Chr17g0550841
Gene Name NA
Pfam domain motif TRAP_beta
Motif E-value 1.9e-44
Motif start 17
Motif end 192
Protein seq >OTF86443
MAKFFTNSLLTLTTVVLLLIAPSVIDGSEAPFIVAHKKATLNRLKSGADKLSVSIDIYNRGSASAYDVSLTDDGWSPEIF
KIISGNTSTSWERLDVGAVLSHSFELESNVKTVFYSTPAVITFRVPTKAALQEAYSTSLLPLEILSDKPKASALHLAKRM
LGNYGSLVSVISIMVLFVYMVATPSKSGSAKGSKKKR*
CDS seq >OTF86443
ATGGCGAAATTCTTCACGAATTCTCTCCTCACCTTAACAACAGTAGTCCTGTTGTTGATCGCACCGTCGGTAATTGACGG
ATCGGAGGCTCCGTTCATCGTAGCTCACAAGAAAGCTACACTCAATAGGCTCAAATCCGGTGCCGATAAACTCTCCGTTT
CAATCGACATTTATAACCGTGGATCTGCGAGTGCATATGATGTTAGCCTCACTGATGACGGCTGGTCTCCCGAAATATTC
AAAATCATCTCCGGAAACACTTCAACATCTTGGGAAAGGCTTGACGTTGGTGCCGTTCTATCTCACTCCTTTGAGCTGGA
GTCAAATGTGAAAACCGTCTTCTATAGCACACCAGCTGTTATTACATTCCGTGTCCCCACAAAGGCTGCACTGCAGGAGG
CATATTCGACATCACTCCTACCTCTTGAAATCCTATCAGATAAGCCTAAGGCGAGCGCACTTCATCTTGCTAAGAGAATG
TTGGGTAATTATGGGTCGCTGGTATCTGTGATCTCCATTATGGTCTTATTTGTGTACATGGTGGCAACTCCATCCAAGTC
CGGTTCTGCAAAGGGAAGCAAGAAGAAACGTTGA
Microexon DNA seq GCTAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq CTACCTCTTGAAATCCTATCAGATAAGCCTAAGGCGAGCGCACTTCATCTTGCTAAGAGAATGTTGGGTAATTATGGGTCGCTGGTATCTGTGATCTCCATTATGGTC
Microexon-tag Amino Acid seq LPLEILSDKPKASALHLAKRMLGNYGSLVSVISIMV
Transcript ID OTF86443
Gene ID Ha.30999
Gene Name NA
Pfam domain motif TRAP_beta
Motif E-value 1.9e-44
Motif start 17
Motif end 192
Protein seq >OTF86443
MAKFFTNSLLTLTTVVLLLIAPSVIDGSEAPFIVAHKKATLNRLKSGADKLSVSIDIYNRGSASAYDVSLTDDGWSPEIF
KIISGNTSTSWERLDVGAVLSHSFELESNVKTVFYSTPAVITFRVPTKAALQEAYSTSLLPLEILSDKPKASALHLAKRM
LGNYGSLVSVISIMVLFVYMVATPSKSGSAKGSKKKR*
CDS seq >OTF86443
ATGGCGAAATTCTTCACGAATTCTCTCCTCACCTTAACAACAGTAGTCCTGTTGTTGATCGCACCGTCGGTAATTGACGG
ATCGGAGGCTCCGTTCATCGTAGCTCACAAGAAAGCTACACTCAATAGGCTCAAATCCGGTGCCGATAAACTCTCCGTTT
CAATCGACATTTATAACCGTGGATCTGCGAGTGCATATGATGTTAGCCTCACTGATGACGGCTGGTCTCCCGAAATATTC
AAAATCATCTCCGGAAACACTTCAACATCTTGGGAAAGGCTTGACGTTGGTGCCGTTCTATCTCACTCCTTTGAGCTGGA
GTCAAATGTGAAAACCGTCTTCTATAGCACACCAGCTGTTATTACATTCCGTGTCCCCACAAAGGCTGCACTGCAGGAGG
CATATTCGACATCACTCCTACCTCTTGAAATCCTATCAGATAAGCCTAAGGCGAGCGCACTTCATCTTGCTAAGAGAATG
TTGGGTAATTATGGGTCGCTGGTATCTGTGATCTCCATTATGGTCTTATTTGTGTACATGGTGGCAACTCCATCCAAGTC
CGGTTCTGCAAAGGGAAGCAAGAAGAAACGTTGA