
Microexon ID | Ha_15:44027643-44027648:- |
Species | Helianthus annuus | Coordinates | 15:44027643..44027648 |
Microexon Cluster ID | MEP11 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | TRAP_beta |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCTAAG |
Microexon Amino Acid seq | AK |
Microexon-tag DNA Seq | CTGCCTCTCGAAATCCTATCGGAAAAACCTAAAGAGAGTCCACTTAATCTCGCTAAGAGGTTGTTGGCTAATTACGGGTCTCTAGTGTCGGTGATCTCCATTGTTGTT |
Microexon-tag Amino Acid Seq | MPLEILSEKPKESPLNLAKRLLANYGSLVSVISIVV |
Microexon-tag spanning region | 44027517-44028306 |
Microexon-tag prediction score | 0.9161 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTF94771x |
Reference Transcript ID | OTF94771 |
Gene ID | HannXRQ_Chr15g0475771 |
Gene Name | NA |
Transcript ID | OTF94771 |
Protein ID | OTF94771 |
Gene ID | HannXRQ_Chr15g0475771 |
Gene Name | NA |
Pfam domain motif | TRAP_beta |
Motif E-value | 2.7e-49 |
Motif start | 17 |
Motif end | 192 |
Protein seq | >OTF94771 MANFTMNNSLISIVTLLIIISSSVIASSDSPFIVAHKKATLNRLKSGAEKVSVSIDLYNQGSAPAYDVSLTDDGWSSDIF KIVSGNTSASWERLDVGAVLSHSFELESNVKTVFYSTPAVITFRAPSKTALQEAYSTSILPLEILSEKPKESPLNLAKRL LANYGSLVSVISIVVLFVYLVATPSKSGAAKGSKKKR* |
CDS seq | >OTF94771 ATGGCGAACTTCACGATGAACAACTCTCTCATCTCAATCGTAACACTCCTCATTATCATTTCATCATCGGTAATCGCCAG TTCCGATTCTCCCTTCATCGTAGCGCACAAGAAAGCTACACTCAACCGACTCAAATCCGGCGCCGAAAAAGTCTCCGTTT CGATCGATCTTTACAATCAAGGATCCGCGCCCGCATATGATGTTAGTCTCACTGATGATGGCTGGTCTTCTGACATATTT AAGATTGTCTCAGGAAACACTTCAGCCTCTTGGGAAAGACTTGATGTCGGTGCGGTTTTATCCCACTCCTTTGAGTTGGA ATCAAATGTGAAAACCGTCTTTTATAGCACCCCAGCTGTTATCACGTTCCGTGCCCCCTCAAAGACCGCGCTTCAGGAGG CTTATTCAACTTCAATTCTGCCTCTCGAAATCCTATCGGAAAAACCTAAAGAGAGTCCACTTAATCTCGCTAAGAGGTTG TTGGCTAATTACGGGTCTCTAGTGTCGGTGATCTCCATTGTTGTTTTATTTGTGTACCTAGTGGCGACTCCATCCAAGTC CGGTGCTGCTAAGGGAAGCAAGAAGAAACGTTGA |
Microexon DNA seq | GCTAAG |
Microexon Amino Acid seq | AK |
Microexon-tag DNA Seq | CTGCCTCTCGAAATCCTATCGGAAAAACCTAAAGAGAGTCCACTTAATCTCGCTAAGAGGTTGTTGGCTAATTACGGGTCTCTAGTGTCGGTGATCTCCATTGTTGTT |
Microexon-tag Amino Acid seq | MPLEILSEKPKESPLNLAKRLLANYGSLVSVISIVV |
Transcript ID | OTF94771 |
Gene ID | Ha.23213 |
Gene Name | NA |
Pfam domain motif | TRAP_beta |
Motif E-value | 2.7e-49 |
Motif start | 17 |
Motif end | 192 |
Protein seq | >OTF94771 MANFTMNNSLISIVTLLIIISSSVIASSDSPFIVAHKKATLNRLKSGAEKVSVSIDLYNQGSAPAYDVSLTDDGWSSDIF KIVSGNTSASWERLDVGAVLSHSFELESNVKTVFYSTPAVITFRAPSKTALQEAYSTSILPLEILSEKPKESPLNLAKRL LANYGSLVSVISIVVLFVYLVATPSKSGAAKGSKKKR* |
CDS seq | >OTF94771 ATGGCGAACTTCACGATGAACAACTCTCTCATCTCAATCGTAACACTCCTCATTATCATTTCATCATCGGTAATCGCCAG TTCCGATTCTCCCTTCATCGTAGCGCACAAGAAAGCTACACTCAACCGACTCAAATCCGGCGCCGAAAAAGTCTCCGTTT CGATCGATCTTTACAATCAAGGATCCGCGCCCGCATATGATGTTAGTCTCACTGATGATGGCTGGTCTTCTGACATATTT AAGATTGTCTCAGGAAACACTTCAGCCTCTTGGGAAAGACTTGATGTCGGTGCGGTTTTATCCCACTCCTTTGAGTTGGA ATCAAATGTGAAAACCGTCTTTTATAGCACCCCAGCTGTTATCACGTTCCGTGCCCCCTCAAAGACCGCGCTTCAGGAGG CTTATTCAACTTCAATTCTGCCTCTCGAAATCCTATCGGAAAAACCTAAAGAGAGTCCACTTAATCTCGCTAAGAGGTTG TTGGCTAATTACGGGTCTCTAGTGTCGGTGATCTCCATTGTTGTTTTATTTGTGTACCTAGTGGCGACTCCATCCAAGTC CGGTGCTGCTAAGGGAAGCAAGAAGAAACGTTGA |