Microexon ID Ha_15:44027643-44027648:-
Species Helianthus annuus
Coordinates 15:44027643..44027648
Microexon Cluster ID MEP11
Size 6
Phase 0
Pfam Domain Motif TRAP_beta
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCTAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq CTGCCTCTCGAAATCCTATCGGAAAAACCTAAAGAGAGTCCACTTAATCTCGCTAAGAGGTTGTTGGCTAATTACGGGTCTCTAGTGTCGGTGATCTCCATTGTTGTT
Microexon-tag Amino Acid Seq MPLEILSEKPKESPLNLAKRLLANYGSLVSVISIVV
Microexon-tag spanning region44027517-44028306
Microexon-tag prediction score0.9161
Overlapped with the annotated transcript (%) 100
New Transcript ID OTF94771x
Reference Transcript ID OTF94771
Gene ID HannXRQ_Chr15g0475771
Gene Name NA
Transcript ID OTF94771
Protein ID OTF94771
Gene ID HannXRQ_Chr15g0475771
Gene Name NA
Pfam domain motif TRAP_beta
Motif E-value 2.7e-49
Motif start 17
Motif end 192
Protein seq >OTF94771
MANFTMNNSLISIVTLLIIISSSVIASSDSPFIVAHKKATLNRLKSGAEKVSVSIDLYNQGSAPAYDVSLTDDGWSSDIF
KIVSGNTSASWERLDVGAVLSHSFELESNVKTVFYSTPAVITFRAPSKTALQEAYSTSILPLEILSEKPKESPLNLAKRL
LANYGSLVSVISIVVLFVYLVATPSKSGAAKGSKKKR*
CDS seq >OTF94771
ATGGCGAACTTCACGATGAACAACTCTCTCATCTCAATCGTAACACTCCTCATTATCATTTCATCATCGGTAATCGCCAG
TTCCGATTCTCCCTTCATCGTAGCGCACAAGAAAGCTACACTCAACCGACTCAAATCCGGCGCCGAAAAAGTCTCCGTTT
CGATCGATCTTTACAATCAAGGATCCGCGCCCGCATATGATGTTAGTCTCACTGATGATGGCTGGTCTTCTGACATATTT
AAGATTGTCTCAGGAAACACTTCAGCCTCTTGGGAAAGACTTGATGTCGGTGCGGTTTTATCCCACTCCTTTGAGTTGGA
ATCAAATGTGAAAACCGTCTTTTATAGCACCCCAGCTGTTATCACGTTCCGTGCCCCCTCAAAGACCGCGCTTCAGGAGG
CTTATTCAACTTCAATTCTGCCTCTCGAAATCCTATCGGAAAAACCTAAAGAGAGTCCACTTAATCTCGCTAAGAGGTTG
TTGGCTAATTACGGGTCTCTAGTGTCGGTGATCTCCATTGTTGTTTTATTTGTGTACCTAGTGGCGACTCCATCCAAGTC
CGGTGCTGCTAAGGGAAGCAAGAAGAAACGTTGA
Microexon DNA seq GCTAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq CTGCCTCTCGAAATCCTATCGGAAAAACCTAAAGAGAGTCCACTTAATCTCGCTAAGAGGTTGTTGGCTAATTACGGGTCTCTAGTGTCGGTGATCTCCATTGTTGTT
Microexon-tag Amino Acid seq MPLEILSEKPKESPLNLAKRLLANYGSLVSVISIVV
Transcript ID OTF94771
Gene ID Ha.23213
Gene Name NA
Pfam domain motif TRAP_beta
Motif E-value 2.7e-49
Motif start 17
Motif end 192
Protein seq >OTF94771
MANFTMNNSLISIVTLLIIISSSVIASSDSPFIVAHKKATLNRLKSGAEKVSVSIDLYNQGSAPAYDVSLTDDGWSSDIF
KIVSGNTSASWERLDVGAVLSHSFELESNVKTVFYSTPAVITFRAPSKTALQEAYSTSILPLEILSEKPKESPLNLAKRL
LANYGSLVSVISIVVLFVYLVATPSKSGAAKGSKKKR*
CDS seq >OTF94771
ATGGCGAACTTCACGATGAACAACTCTCTCATCTCAATCGTAACACTCCTCATTATCATTTCATCATCGGTAATCGCCAG
TTCCGATTCTCCCTTCATCGTAGCGCACAAGAAAGCTACACTCAACCGACTCAAATCCGGCGCCGAAAAAGTCTCCGTTT
CGATCGATCTTTACAATCAAGGATCCGCGCCCGCATATGATGTTAGTCTCACTGATGATGGCTGGTCTTCTGACATATTT
AAGATTGTCTCAGGAAACACTTCAGCCTCTTGGGAAAGACTTGATGTCGGTGCGGTTTTATCCCACTCCTTTGAGTTGGA
ATCAAATGTGAAAACCGTCTTTTATAGCACCCCAGCTGTTATCACGTTCCGTGCCCCCTCAAAGACCGCGCTTCAGGAGG
CTTATTCAACTTCAATTCTGCCTCTCGAAATCCTATCGGAAAAACCTAAAGAGAGTCCACTTAATCTCGCTAAGAGGTTG
TTGGCTAATTACGGGTCTCTAGTGTCGGTGATCTCCATTGTTGTTTTATTTGTGTACCTAGTGGCGACTCCATCCAAGTC
CGGTGCTGCTAAGGGAAGCAAGAAGAAACGTTGA