Microexon ID Gm_16:4870580-4870585:-
Species Glycine max
Coordinates 16:4870580..4870585
Microexon Cluster ID MEP11
Size 6
Phase 0
Pfam Domain Motif TRAP_beta
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCTAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq TTGCCTTTGGACGTTCTTTCTGATAGACCTCCTGAGAAGAAGTTTGAATGGGCTAAGAGGTTGCTGGCTAAGTATGGATCTCTAATCTCAGTGATCTCCATCATGGTC
Microexon-tag Amino Acid Seq MPLDVLSDRPPEKKFEWAKRLLAKYGSLISVISIMV
Microexon-tag spanning region4870132-4870752
Microexon-tag prediction score0.9725
Overlapped with the annotated transcript (%) 100
New Transcript ID KRH06861x
Reference Transcript ID KRH06861
Gene ID GLYMA_16G050800
Gene Name NA
Transcript ID KRH06861
Protein ID KRH06861
Gene ID GLYMA_16G050800
Gene Name NA
Pfam domain motif TRAP_beta
Motif E-value 1.4e-53
Motif start 15
Motif end 190
Protein seq >KRH06861
MADPIAKALIAFALLASLLLCSHASSDVPFIVAHKKASLNRLKSGAERVSVTIDIFNQGTSTAYDVSLSDDSWPSDAFDV
ISGSTSKSWERLDAGGILSHTFELEAKSKGVFAGEPAVIKFRVPTKSALQEAYSTPILPLDVLSDRPPEKKFEWAKRLLA
KYGSLISVISIMVLFVYLVASPSKSSAKGSKKKR*
CDS seq >KRH06861
ATGGCGGATCCAATCGCGAAGGCTCTGATCGCGTTTGCGCTCTTAGCTTCCCTCTTGCTGTGTTCGCACGCTTCCTCCGA
CGTTCCCTTCATCGTTGCTCACAAGAAGGCCTCCCTCAACAGACTCAAGTCCGGCGCCGAAAGGGTCTCCGTCACCATCG
ACATCTTCAACCAAGGAACCTCGACGGCCTATGATGTAAGCTTATCAGACGATAGCTGGCCAAGTGATGCTTTTGATGTA
ATCAGCGGTAGCACTTCAAAGTCATGGGAAAGGCTTGATGCTGGTGGCATCCTTTCTCACACATTTGAGCTGGAGGCAAA
ATCAAAGGGAGTATTTGCCGGTGAACCAGCTGTCATAAAGTTCCGTGTTCCCACAAAGTCTGCTTTGCAGGAGGCATATT
CAACTCCCATATTGCCTTTGGACGTTCTTTCTGATAGACCTCCTGAGAAGAAGTTTGAATGGGCTAAGAGGTTGCTGGCT
AAGTATGGATCTCTAATCTCAGTGATCTCCATCATGGTCCTGTTCGTATACTTGGTAGCTTCACCATCAAAATCCAGTGC
AAAGGGAAGCAAGAAGAAGCGTTAA
Microexon DNA seq GCTAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq TTGCCTTTGGACGTTCTTTCTGATAGACCTCCTGAGAAGAAGTTTGAATGGGCTAAGAGGTTGCTGGCTAAGTATGGATCTCTAATCTCAGTGATCTCCATCATGGTC
Microexon-tag Amino Acid seq MPLDVLSDRPPEKKFEWAKRLLAKYGSLISVISIMV
Transcript ID KRH06861
Gene ID Gm.19771
Gene Name NA
Pfam domain motif TRAP_beta
Motif E-value 1.4e-53
Motif start 15
Motif end 190
Protein seq >KRH06861
MADPIAKALIAFALLASLLLCSHASSDVPFIVAHKKASLNRLKSGAERVSVTIDIFNQGTSTAYDVSLSDDSWPSDAFDV
ISGSTSKSWERLDAGGILSHTFELEAKSKGVFAGEPAVIKFRVPTKSALQEAYSTPILPLDVLSDRPPEKKFEWAKRLLA
KYGSLISVISIMVLFVYLVASPSKSSAKGSKKKR*
CDS seq >KRH06861
ATGGCGGATCCAATCGCGAAGGCTCTGATCGCGTTTGCGCTCTTAGCTTCCCTCTTGCTGTGTTCGCACGCTTCCTCCGA
CGTTCCCTTCATCGTTGCTCACAAGAAGGCCTCCCTCAACAGACTCAAGTCCGGCGCCGAAAGGGTCTCCGTCACCATCG
ACATCTTCAACCAAGGAACCTCGACGGCCTATGATGTAAGCTTATCAGACGATAGCTGGCCAAGTGATGCTTTTGATGTA
ATCAGCGGTAGCACTTCAAAGTCATGGGAAAGGCTTGATGCTGGTGGCATCCTTTCTCACACATTTGAGCTGGAGGCAAA
ATCAAAGGGAGTATTTGCCGGTGAACCAGCTGTCATAAAGTTCCGTGTTCCCACAAAGTCTGCTTTGCAGGAGGCATATT
CAACTCCCATATTGCCTTTGGACGTTCTTTCTGATAGACCTCCTGAGAAGAAGTTTGAATGGGCTAAGAGGTTGCTGGCT
AAGTATGGATCTCTAATCTCAGTGATCTCCATCATGGTCCTGTTCGTATACTTGGTAGCTTCACCATCAAAATCCAGTGC
AAAGGGAAGCAAGAAGAAGCGTTAA