
Microexon ID | At_5:4528036-4528041:+ |
Species | Arabidopsis thaliana | Coordinates | 5:4528036..4528041 |
Microexon Cluster ID | MEP11 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | TRAP_beta |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCCAAG |
Microexon Amino Acid seq | AK |
Microexon-tag DNA Seq | CTACCTCTAGATATCCTCGCAGACAAACCTCCAACGAAACCTTTGGACGTGGCCAAGAGGTTGCTGGCGAAATATGGATCACTCGTCTCCGTGATCTCCATGGTGGTT |
Microexon-tag Amino Acid Seq | LPLDILADKPPTKPLDVAKRLLAKYGSLVSVISMVV |
Microexon-tag spanning region | 4527849-4528184 |
Microexon-tag prediction score | 0.9473 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT5G14030.1x |
Reference Transcript ID | AT5G14030.1 |
Gene ID | AT5G14030 |
Gene Name | NA |
Transcript ID | AT5G14030.1 |
Protein ID | AT5G14030.1 |
Gene ID | AT5G14030 |
Gene Name | NA |
Pfam domain motif | TRAP_beta |
Motif E-value | 1.2e-56 |
Motif start | 13 |
Motif end | 188 |
Protein seq | >AT5G14030.1 MAVAVAKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGSSSAYDVTLTDNSWDKKTFEV VNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVTFRIPTKPALQEAYSTPLLPLDILADKPPTKPLDVAKRLLA KYGSLVSVISMVVCFIYLVATPKSNVSKASSKKKR* |
CDS seq | >AT5G14030.1 ATGGCCGTCGCTGTAGCTAAGCTTCTGATCTCCGCCATGGCGGTTTTCATGCTTGTTTCTGCTTCGTTCGCGACCTCGGA AGTGCCGTTCATGGTGGTTCACAAGAAAGCCACTCTCAACAGGCTCAAATCTGGCGCCGAACGCGTCTCCGTTTCCTACG ACATCTATAACCAAGGATCCTCGTCGGCGTATGATGTGACTCTGACAGATAATAGCTGGGATAAAAAGACTTTTGAAGTT GTTAATGGAAACACTTCAAAATCATGGGAAAGACTTGATGCAGGAGGTATTCTGTCTCATTCTATCGAATTGGAGGCCAA GGTTAAAGGAGTCTTCTACGGTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGGAAGCATACT CAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTCCAACGAAACCTTTGGACGTGGCCAAGAGGTTGCTGGCG AAATATGGATCACTCGTCTCCGTGATCTCCATGGTGGTTTGTTTCATATACTTGGTGGCAACACCTAAGTCCAACGTATC AAAGGCAAGCAGCAAGAAGAAGCGTTAA |
Microexon DNA seq | GCCAAG |
Microexon Amino Acid seq | AK |
Microexon-tag DNA Seq | CTACCTCTAGATATCCTCGCAGACAAACCTCCAACGAAACCTTTGGACGTGGCCAAGAGGTTGCTGGCGAAATATGGATCACTCGTCTCCGTGATCTCCATGGTGGTT |
Microexon-tag Amino Acid seq | LPLDILADKPPTKPLDVAKRLLAKYGSLVSVISMVV |
Transcript ID | AT5G14030.1 |
Gene ID | At.22991 |
Gene Name | NA |
Pfam domain motif | TRAP_beta |
Motif E-value | 1.3e-56 |
Motif start | 13 |
Motif end | 188 |
Protein seq | >AT5G14030.1 MAVAVAKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGSSSAYDVTLTDNSWDKKTFEV VNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVTFRIPTKPALQEAYSTPLLPLDILADKPPTKPLDVAKRLLA KYGSLVSVISMVVCFIYLVATPKSNVSKASSKKKR* |
CDS seq | >AT5G14030.1 ATGGCCGTCGCTGTAGCTAAGCTTCTGATCTCCGCCATGGCGGTTTTCATGCTTGTTTCTGCTTCGTTCGCGACCTCGGA AGTGCCGTTCATGGTGGTTCACAAGAAAGCCACTCTCAACAGGCTCAAATCTGGCGCCGAACGCGTCTCCGTTTCCTACG ACATCTATAACCAAGGATCCTCGTCGGCGTATGATGTGACTCTGACAGATAATAGCTGGGATAAAAAGACTTTTGAAGTT GTTAATGGAAACACTTCAAAATCATGGGAAAGACTTGATGCAGGAGGTATTCTGTCTCATTCTATCGAATTGGAGGCCAA GGTTAAAGGAGTCTTCTACGGTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGGAAGCATACT CAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTCCAACGAAACCTTTGGACGTGGCCAAGAGGTTGCTGGCG AAATATGGATCACTCGTCTCCGTGATCTCCATGGTGGTTTGTTTCATATACTTGGTGGCAACACCTAAGTCCAACGTATC AAAGGCAAGCAGCAAGAAGAAGCGTTAA |