Microexon ID At_5:4528036-4528041:+
Species Arabidopsis thaliana
Coordinates 5:4528036..4528041
Microexon Cluster ID MEP11
Size 6
Phase 0
Pfam Domain Motif TRAP_beta
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTGCCTYTDGAYRTYCTTGCWGAYAGRCCTCCWGAGAAGAAGTTTGAATKGGCTAAGAGRYTKBTGGCDAARTAYGGRTCWCTDRTYTCWGTGRTCTCCWTYGTKGTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCCAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq CTACCTCTAGATATCCTCGCAGACAAACCTCCAACGAAACCTTTGGACGTGGCCAAGAGGTTGCTGGCGAAATATGGATCACTCGTCTCCGTGATCTCCATGGTGGTT
Microexon-tag Amino Acid Seq LPLDILADKPPTKPLDVAKRLLAKYGSLVSVISMVV
Microexon-tag spanning region4527849-4528184
Microexon-tag prediction score0.9473
Overlapped with the annotated transcript (%) 100
New Transcript ID AT5G14030.1x
Reference Transcript ID AT5G14030.1
Gene ID AT5G14030
Gene Name NA
Transcript ID AT5G14030.1
Protein ID AT5G14030.1
Gene ID AT5G14030
Gene Name NA
Pfam domain motif TRAP_beta
Motif E-value 1.2e-56
Motif start 13
Motif end 188
Protein seq >AT5G14030.1
MAVAVAKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGSSSAYDVTLTDNSWDKKTFEV
VNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVTFRIPTKPALQEAYSTPLLPLDILADKPPTKPLDVAKRLLA
KYGSLVSVISMVVCFIYLVATPKSNVSKASSKKKR*
CDS seq >AT5G14030.1
ATGGCCGTCGCTGTAGCTAAGCTTCTGATCTCCGCCATGGCGGTTTTCATGCTTGTTTCTGCTTCGTTCGCGACCTCGGA
AGTGCCGTTCATGGTGGTTCACAAGAAAGCCACTCTCAACAGGCTCAAATCTGGCGCCGAACGCGTCTCCGTTTCCTACG
ACATCTATAACCAAGGATCCTCGTCGGCGTATGATGTGACTCTGACAGATAATAGCTGGGATAAAAAGACTTTTGAAGTT
GTTAATGGAAACACTTCAAAATCATGGGAAAGACTTGATGCAGGAGGTATTCTGTCTCATTCTATCGAATTGGAGGCCAA
GGTTAAAGGAGTCTTCTACGGTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGGAAGCATACT
CAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTCCAACGAAACCTTTGGACGTGGCCAAGAGGTTGCTGGCG
AAATATGGATCACTCGTCTCCGTGATCTCCATGGTGGTTTGTTTCATATACTTGGTGGCAACACCTAAGTCCAACGTATC
AAAGGCAAGCAGCAAGAAGAAGCGTTAA
Microexon DNA seq GCCAAG
Microexon Amino Acid seq AK
Microexon-tag DNA Seq CTACCTCTAGATATCCTCGCAGACAAACCTCCAACGAAACCTTTGGACGTGGCCAAGAGGTTGCTGGCGAAATATGGATCACTCGTCTCCGTGATCTCCATGGTGGTT
Microexon-tag Amino Acid seq LPLDILADKPPTKPLDVAKRLLAKYGSLVSVISMVV
Transcript ID AT5G14030.1
Gene ID At.22991
Gene Name NA
Pfam domain motif TRAP_beta
Motif E-value 1.3e-56
Motif start 13
Motif end 188
Protein seq >AT5G14030.1
MAVAVAKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGSSSAYDVTLTDNSWDKKTFEV
VNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVTFRIPTKPALQEAYSTPLLPLDILADKPPTKPLDVAKRLLA
KYGSLVSVISMVVCFIYLVATPKSNVSKASSKKKR*
CDS seq >AT5G14030.1
ATGGCCGTCGCTGTAGCTAAGCTTCTGATCTCCGCCATGGCGGTTTTCATGCTTGTTTCTGCTTCGTTCGCGACCTCGGA
AGTGCCGTTCATGGTGGTTCACAAGAAAGCCACTCTCAACAGGCTCAAATCTGGCGCCGAACGCGTCTCCGTTTCCTACG
ACATCTATAACCAAGGATCCTCGTCGGCGTATGATGTGACTCTGACAGATAATAGCTGGGATAAAAAGACTTTTGAAGTT
GTTAATGGAAACACTTCAAAATCATGGGAAAGACTTGATGCAGGAGGTATTCTGTCTCATTCTATCGAATTGGAGGCCAA
GGTTAAAGGAGTCTTCTACGGTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGGAAGCATACT
CAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTCCAACGAAACCTTTGGACGTGGCCAAGAGGTTGCTGGCG
AAATATGGATCACTCGTCTCCGTGATCTCCATGGTGGTTTGTTTCATATACTTGGTGGCAACACCTAAGTCCAACGTATC
AAAGGCAAGCAGCAAGAAGAAGCGTTAA