Microexon ID Zm_8:120715054-120715059:+
Species Zea mays
Coordinates 8:120715054..120715059
Microexon Cluster ID MEP10
Size 6
Phase 0
Pfam Domain Motif DUF4788
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATGGAG
Microexon Amino Acid seq ME
Microexon-tag DNA Seq TTTGAGGACTATATTGAACCCCTCAAGGTGTACCTGCAGAAGTACAGAGAGATGGAGGGTGATAGTAAGTTAACTTCAAAATCCAGCGATGGCTCCATTAAAAAGGAT
Microexon-tag Amino Acid Seq FEDYIEPLKVYLQKYREMEGDSKLTSKSSDGSIKKD
Microexon-tag spanning region120714255-120716248
Microexon-tag prediction score0.9424
Overlapped with the annotated transcript (%) 94.44
New Transcript ID Zm00001d010574_T001x
Reference Transcript ID Zm00001d010574_T001
Gene ID Zm00001d010574
Gene Name CCAAT-DR1-transcription factor 15
Zm_8:120715054-120715059:+ does not have available information here.
Microexon DNA seq ATGGAG
Microexon Amino Acid seq ME
Microexon-tag DNA Seq TTTGAGGACTATATTGAACCCCTCAAGGTGTACCTGCAGAAGTACAGAGAGATGGAGGGTGATAGTAAGTTAACTTCAAAATCCAGCGATGGCTCCATTAAAAAGGAT
Microexon-tag Amino Acid seq FEDYIEPLKVYLQKYREMEGDSKLTSKSSDGSIKKD
Transcript ID Zm.34264.1
Gene ID Zm.34264
Gene Name CCAAT-DR1-transcription factor 15
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Zm.34264.1
MADAPASPGGGGGSHESGSPRGGGGGGGGSVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEA
SDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTSKSSDGSIKKDALGHVGASSSAVQGMGQQG
TYNQGMGYMQPQYHNGDISN*
CDS seq >Zm.34264.1
ATGGCGGACGCTCCGGCGAGCCCTGGGGGCGGAGGCGGGAGCCACGAGAGCGGGAGCCCCAGGGGCGGCGGAGGTGGAGG
CGGTGGCAGCGTCAGGGAGCAGGACAGGTTCCTGCCCATCGCCAACATCAGTCGCATCATGAAGAAGGCCATCCCGGCTA
ACGGGAAGATCGCCAAGGACGCTAAGGAGACCGTGCAGGAGTGCGTCTCGGAGTTCATCTCCTTCATCACTAGCGAGGCG
AGTGACAAGTGCCAGAGGGAGAAGCGGAAGACCATCAATGGCGACGACCTGCTGTGGGCCATGGCCACGCTGGGGTTTGA
GGACTATATTGAACCCCTCAAGGTGTACCTGCAGAAGTACAGAGAGATGGAGGGTGATAGTAAGTTAACTTCAAAATCCA
GCGATGGCTCCATTAAAAAGGATGCCCTTGGTCATGTGGGAGCAAGTAGCTCAGCTGTACAAGGGATGGGTCAGCAAGGA
ACATACAACCAAGGAATGGGTTATATGCAACCTCAGTACCATAACGGAGATATCTCGAACTAA