Microexon ID Zm_3:185335594-185335599:+
Species Zea mays
Coordinates 3:185335594..185335599
Microexon Cluster ID MEP10
Size 6
Phase 0
Pfam Domain Motif DUF4788
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATGGAG
Microexon Amino Acid seq ME
Microexon-tag DNA Seq TTCGAGGAGTACGTCGAGCCTCTCAAGATTTACCTACAAAAGTACAAAGAGATGGAGGGTGATAGCAAGCTGTCTACAAAGGCTGGCGAGGGCTCTGTAAAGAAGGAT
Microexon-tag Amino Acid Seq FEEYVEPLKIYLQKYKEMEGDSKLSTKAGEGSVKKD
Microexon-tag spanning region185335408-185336081
Microexon-tag prediction score0.9347
Overlapped with the annotated transcript (%) 100
New Transcript ID Zm00001d042968_T002x
Reference Transcript ID Zm00001d042968_T002
Gene ID Zm00001d042968
Gene Name CCAAT-HAP3-transcription factor 31
Transcript ID Zm00001d042968_T002
Protein ID Zm00001d042968_P002
Gene ID Zm00001d042968
Gene Name CCAAT-HAP3-transcription factor 31
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Zm00001d042968_P002
MADDGGSHEGSGGGGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTING
DDLLWAMATLGFEEYVEPLKIYLQKYKEMEGDSKLSTKAGEGSVKKDAISPHGGTSSSSNQLVQHGVYNQGMGYMQPQLG
KSLHCLPCVLAENRRHLQRVLISAMAASQV*
CDS seq >Zm00001d042968_T002
ATGGCCGACGACGGCGGGAGCCACGAGGGCAGCGGCGGCGGCGGAGGCGTCCGGGAGCAGGACCGGTTCCTGCCCATCGC
CAACATCAGCCGGATCATGAAGAAGGCCGTCCCGGCCAACGGCAAGATCGCCAAGGACGCTAAGGAGACCCTGCAGGAGT
GCGTCTCCGAGTTCATATCATTCGTGACCAGCGAGGCCAGCGACAAATGCCAGAAGGAGAAACGAAAGACAATCAACGGG
GACGATTTGCTCTGGGCGATGGCCACTTTAGGATTCGAGGAGTACGTCGAGCCTCTCAAGATTTACCTACAAAAGTACAA
AGAGATGGAGGGTGATAGCAAGCTGTCTACAAAGGCTGGCGAGGGCTCTGTAAAGAAGGATGCAATTAGTCCCCATGGTG
GCACCAGTAGCTCAAGTAATCAGTTGGTTCAGCATGGAGTCTACAACCAAGGGATGGGCTATATGCAGCCACAGCTAGGG
AAGTCTCTGCATTGCTTACCATGTGTATTGGCAGAAAACAGGAGGCACTTACAAAGGGTGTTAATCTCTGCGATGGCTGC
CTCTCAGGTGTAA
Microexon DNA seq ATGGAG
Microexon Amino Acid seq ME
Microexon-tag DNA Seq TTCGAGGAGTACGTCGAGCCTCTCAAGATTTACCTACAAAAGTACAAAGAGATGGAGGGTGATAGCAAGCTGTCTACAAAGGCTGGCGAGGGCTCTGTAAAGAAGGAT
Microexon-tag Amino Acid seq FEEYVEPLKIYLQKYKEMEGDSKLSTKAGEGSVKKD
Transcript ID Zm.15975.1
Gene ID Zm.15975
Gene Name CCAAT-HAP3-transcription factor 31
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Zm.15975.1
MADDGGSHEGSGGGGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTING
DDLLWAMATLGFEEYVEPLKIYLQKYKEMEGDSKLSTKAGEGSVKKDAISPHGGTSSSSNQLVQHGVYNQGMGYMQPQYH
NGET*
CDS seq >Zm.15975.1
ATGGCCGACGACGGCGGGAGCCACGAGGGCAGCGGCGGCGGCGGAGGCGTCCGGGAGCAGGACCGGTTCCTGCCCATCGC
CAACATCAGCCGGATCATGAAGAAGGCCGTCCCGGCCAACGGCAAGATCGCCAAGGACGCTAAGGAGACCCTGCAGGAGT
GCGTCTCCGAGTTCATATCATTCGTGACCAGCGAGGCCAGCGACAAATGCCAGAAGGAGAAACGAAAGACAATCAACGGG
GACGATTTGCTCTGGGCGATGGCCACTTTAGGATTCGAGGAGTACGTCGAGCCTCTCAAGATTTACCTACAAAAGTACAA
AGAGATGGAGGGTGATAGCAAGCTGTCTACAAAGGCTGGCGAGGGCTCTGTAAAGAAGGATGCAATTAGTCCCCATGGTG
GCACCAGTAGCTCAAGTAATCAGTTGGTTCAGCATGGAGTCTACAACCAAGGGATGGGCTATATGCAGCCACAGTACCAC
AATGGGGAAACCTAA