
Microexon ID | Zm_3:185335594-185335599:+ |
Species | Zea mays | Coordinates | 3:185335594..185335599 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATGGAG |
Microexon Amino Acid seq | ME |
Microexon-tag DNA Seq | TTCGAGGAGTACGTCGAGCCTCTCAAGATTTACCTACAAAAGTACAAAGAGATGGAGGGTGATAGCAAGCTGTCTACAAAGGCTGGCGAGGGCTCTGTAAAGAAGGAT |
Microexon-tag Amino Acid Seq | FEEYVEPLKIYLQKYKEMEGDSKLSTKAGEGSVKKD |
Microexon-tag spanning region | 185335408-185336081 |
Microexon-tag prediction score | 0.9347 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Zm00001d042968_T002x |
Reference Transcript ID | Zm00001d042968_T002 |
Gene ID | Zm00001d042968 |
Gene Name | CCAAT-HAP3-transcription factor 31 |
Transcript ID | Zm00001d042968_T002 |
Protein ID | Zm00001d042968_P002 |
Gene ID | Zm00001d042968 |
Gene Name | CCAAT-HAP3-transcription factor 31 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm00001d042968_P002 MADDGGSHEGSGGGGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTING DDLLWAMATLGFEEYVEPLKIYLQKYKEMEGDSKLSTKAGEGSVKKDAISPHGGTSSSSNQLVQHGVYNQGMGYMQPQLG KSLHCLPCVLAENRRHLQRVLISAMAASQV* |
CDS seq | >Zm00001d042968_T002 ATGGCCGACGACGGCGGGAGCCACGAGGGCAGCGGCGGCGGCGGAGGCGTCCGGGAGCAGGACCGGTTCCTGCCCATCGC CAACATCAGCCGGATCATGAAGAAGGCCGTCCCGGCCAACGGCAAGATCGCCAAGGACGCTAAGGAGACCCTGCAGGAGT GCGTCTCCGAGTTCATATCATTCGTGACCAGCGAGGCCAGCGACAAATGCCAGAAGGAGAAACGAAAGACAATCAACGGG GACGATTTGCTCTGGGCGATGGCCACTTTAGGATTCGAGGAGTACGTCGAGCCTCTCAAGATTTACCTACAAAAGTACAA AGAGATGGAGGGTGATAGCAAGCTGTCTACAAAGGCTGGCGAGGGCTCTGTAAAGAAGGATGCAATTAGTCCCCATGGTG GCACCAGTAGCTCAAGTAATCAGTTGGTTCAGCATGGAGTCTACAACCAAGGGATGGGCTATATGCAGCCACAGCTAGGG AAGTCTCTGCATTGCTTACCATGTGTATTGGCAGAAAACAGGAGGCACTTACAAAGGGTGTTAATCTCTGCGATGGCTGC CTCTCAGGTGTAA |
Microexon DNA seq | ATGGAG |
Microexon Amino Acid seq | ME |
Microexon-tag DNA Seq | TTCGAGGAGTACGTCGAGCCTCTCAAGATTTACCTACAAAAGTACAAAGAGATGGAGGGTGATAGCAAGCTGTCTACAAAGGCTGGCGAGGGCTCTGTAAAGAAGGAT |
Microexon-tag Amino Acid seq | FEEYVEPLKIYLQKYKEMEGDSKLSTKAGEGSVKKD |
Transcript ID | Zm.15975.1 |
Gene ID | Zm.15975 |
Gene Name | CCAAT-HAP3-transcription factor 31 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm.15975.1 MADDGGSHEGSGGGGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTING DDLLWAMATLGFEEYVEPLKIYLQKYKEMEGDSKLSTKAGEGSVKKDAISPHGGTSSSSNQLVQHGVYNQGMGYMQPQYH NGET* |
CDS seq | >Zm.15975.1 ATGGCCGACGACGGCGGGAGCCACGAGGGCAGCGGCGGCGGCGGAGGCGTCCGGGAGCAGGACCGGTTCCTGCCCATCGC CAACATCAGCCGGATCATGAAGAAGGCCGTCCCGGCCAACGGCAAGATCGCCAAGGACGCTAAGGAGACCCTGCAGGAGT GCGTCTCCGAGTTCATATCATTCGTGACCAGCGAGGCCAGCGACAAATGCCAGAAGGAGAAACGAAAGACAATCAACGGG GACGATTTGCTCTGGGCGATGGCCACTTTAGGATTCGAGGAGTACGTCGAGCCTCTCAAGATTTACCTACAAAAGTACAA AGAGATGGAGGGTGATAGCAAGCTGTCTACAAAGGCTGGCGAGGGCTCTGTAAAGAAGGATGCAATTAGTCCCCATGGTG GCACCAGTAGCTCAAGTAATCAGTTGGTTCAGCATGGAGTCTACAACCAAGGGATGGGCTATATGCAGCCACAGTACCAC AATGGGGAAACCTAA |