
Microexon ID | Vv_8:14203290-14203295:+ |
Species | Vistis vinifera | Coordinates | 8:14203290..14203295 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATGGAG |
Microexon Amino Acid seq | ME |
Microexon-tag DNA Seq | TTTGAGGATTATATTGATCCGCTGAAGTTGTACTTGGCTGCATACAGAGAGATGGAGGGTGACACCAAGGGACCGGCAAAGGGTGGAGATGGGCCGGCTAGGAAAGAT |
Microexon-tag Amino Acid Seq | FEDYIDPLKLYLAAYREMEGDTKGPAKGGDGPARKD |
Microexon-tag spanning region | 14203114-14203436 |
Microexon-tag prediction score | 0.9555 |
Overlapped with the annotated transcript (%) | 94.44 |
New Transcript ID | VIT_08s0040g03260.t01x |
Reference Transcript ID | VIT_08s0040g03260.t01 |
Gene ID | VIT_08s0040g03260 |
Gene Name | NA |
Vv_8:14203290-14203295:+ does not have available information here.
Microexon DNA seq | ATGGAG |
Microexon Amino Acid seq | ME |
Microexon-tag DNA Seq | TTTGAGGATTATATTGATCCGCTGAAGTTGTACTTGGCTGCATACAGAGAGATGGAGGGTGACACCAAGGGACCGGCAAAGGGTGGAGATGGGCCGGCTAGGAAAGAT |
Microexon-tag Amino Acid seq | FEDYIDPLKLYLAAYREMEGDTKGPAKGGDGPARKD |
Transcript ID | Vv.30751.1 |
Gene ID | Vv.30751 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Vv.30751.1 MADAAASPGEGSHESGEQIPHSNVREQDRFLPIANISRIMKKALPANGKIAKDAKEIMQECVSEFISFITSEASDKCQRE KRKTINGDDLLWAMATLGFEDYIDPLKLYLAAYREMEGDTKGPAKGGDGPARKDAAGAQSSINSHISHQGPYTQNVNYET PQR* |
CDS seq | >Vv.30751.1 ATGGCCGACGCTGCTGCGAGCCCCGGCGAAGGTAGTCACGAGAGCGGCGAGCAGATCCCCCACTCGAACGTGCGCGAGCA AGATCGGTTTCTTCCGATCGCGAATATTAGCCGGATCATGAAGAAGGCGCTTCCCGCGAATGGAAAGATCGCTAAGGATG CGAAAGAGATCATGCAAGAATGCGTCTCGGAGTTCATCAGTTTCATCACTAGCGAGGCGAGTGATAAATGTCAGAGAGAG AAGAGGAAGACTATTAATGGGGATGATTTGCTCTGGGCAATGGCGACTTTAGGGTTTGAGGATTATATTGATCCGCTGAA GTTGTACTTGGCTGCATACAGAGAGATGGAGGGTGACACCAAGGGACCGGCAAAGGGTGGAGATGGGCCGGCTAGGAAAG ATGCAGCTGGAGCTCAATCAAGCATTAATTCCCACATTTCACATCAAGGTCCTTACACGCAAAATGTGAACTATGAGACT CCTCAACGTTGA |