Microexon ID Vv_8:14203290-14203295:+
Species Vistis vinifera
Coordinates 8:14203290..14203295
Microexon Cluster ID MEP10
Size 6
Phase 0
Pfam Domain Motif DUF4788
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATGGAG
Microexon Amino Acid seq ME
Microexon-tag DNA Seq TTTGAGGATTATATTGATCCGCTGAAGTTGTACTTGGCTGCATACAGAGAGATGGAGGGTGACACCAAGGGACCGGCAAAGGGTGGAGATGGGCCGGCTAGGAAAGAT
Microexon-tag Amino Acid Seq FEDYIDPLKLYLAAYREMEGDTKGPAKGGDGPARKD
Microexon-tag spanning region14203114-14203436
Microexon-tag prediction score0.9555
Overlapped with the annotated transcript (%) 94.44
New Transcript ID VIT_08s0040g03260.t01x
Reference Transcript ID VIT_08s0040g03260.t01
Gene ID VIT_08s0040g03260
Gene Name NA
Vv_8:14203290-14203295:+ does not have available information here.
Microexon DNA seq ATGGAG
Microexon Amino Acid seq ME
Microexon-tag DNA Seq TTTGAGGATTATATTGATCCGCTGAAGTTGTACTTGGCTGCATACAGAGAGATGGAGGGTGACACCAAGGGACCGGCAAAGGGTGGAGATGGGCCGGCTAGGAAAGAT
Microexon-tag Amino Acid seq FEDYIDPLKLYLAAYREMEGDTKGPAKGGDGPARKD
Transcript ID Vv.30751.1
Gene ID Vv.30751
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Vv.30751.1
MADAAASPGEGSHESGEQIPHSNVREQDRFLPIANISRIMKKALPANGKIAKDAKEIMQECVSEFISFITSEASDKCQRE
KRKTINGDDLLWAMATLGFEDYIDPLKLYLAAYREMEGDTKGPAKGGDGPARKDAAGAQSSINSHISHQGPYTQNVNYET
PQR*
CDS seq >Vv.30751.1
ATGGCCGACGCTGCTGCGAGCCCCGGCGAAGGTAGTCACGAGAGCGGCGAGCAGATCCCCCACTCGAACGTGCGCGAGCA
AGATCGGTTTCTTCCGATCGCGAATATTAGCCGGATCATGAAGAAGGCGCTTCCCGCGAATGGAAAGATCGCTAAGGATG
CGAAAGAGATCATGCAAGAATGCGTCTCGGAGTTCATCAGTTTCATCACTAGCGAGGCGAGTGATAAATGTCAGAGAGAG
AAGAGGAAGACTATTAATGGGGATGATTTGCTCTGGGCAATGGCGACTTTAGGGTTTGAGGATTATATTGATCCGCTGAA
GTTGTACTTGGCTGCATACAGAGAGATGGAGGGTGACACCAAGGGACCGGCAAAGGGTGGAGATGGGCCGGCTAGGAAAG
ATGCAGCTGGAGCTCAATCAAGCATTAATTCCCACATTTCACATCAAGGTCCTTACACGCAAAATGTGAACTATGAGACT
CCTCAACGTTGA