Microexon ID Vv_6:4348062-4348067:-
Species Vistis vinifera
Coordinates 6:4348062..4348067
Microexon Cluster ID MEP10
Size 6
Phase 0
Pfam Domain Motif DUF4788
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATAGAG
Microexon Amino Acid seq IE
Microexon-tag DNA Seq TTTGAAGATTATATTGATCCTCTGAAAGTGTATCTACACAGGTTCAGAGAGATAGAGGGTGACGCCAAGGGATCTGTGAAGGGTGGAGATGGATCTACTAAAAAAGAT
Microexon-tag Amino Acid Seq FEDYIDPLKVYLHRFREIEGDAKGSVKGGDGSTKKD
Microexon-tag spanning region4347864-4348313
Microexon-tag prediction score0.9524
Overlapped with the annotated transcript (%) 94.44
New Transcript ID VIT_06s0004g03490.t01x
Reference Transcript ID VIT_06s0004g03490.t01
Gene ID VIT_06s0004g03490
Gene Name NA
Vv_6:4348062-4348067:- does not have available information here.
Microexon DNA seq ATAGAG
Microexon Amino Acid seq IE
Microexon-tag DNA Seq TTTGAAGATTATATTGATCCTCTGAAAGTGTATCTACACAGGTTCAGAGAGATAGAGGGTGACGCCAAGGGATCTGTGAAGGGTGGAGATGGATCTACTAAAAAAGAT
Microexon-tag Amino Acid seq FEDYIDPLKVYLHRFREIEGDAKGSVKGGDGSTKKD
Transcript ID Vv.26670.1
Gene ID Vv.26670
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Vv.26670.1
MAEAPTSPGGGGSHESGEHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETLQECVSEFISFITSEASDKCQK
EKRKTINGDDLLWAMATLGFEDYIDPLKVYLHRFREIEGDAKGSVKGGDGSTKKD*
CDS seq >Vv.26670.1
ATGGCTGAAGCTCCGACGAGCCCCGGCGGTGGCGGCAGTCACGAGAGCGGCGAGCACAGCCCTCGTTCCAATGTGCGAGA
GCAGGATAGGTACCTTCCTATCGCAAATATCAGCAGGATCATGAAGAAGGCTCTTCCGGCCAACGGCAAGATCGCCAAGG
ATGCGAAGGAGACTCTCCAAGAATGCGTTTCCGAGTTCATCAGTTTCATCACCAGCGAAGCGAGTGACAAGTGCCAGAAG
GAGAAGAGGAAGACAATTAATGGTGATGATTTATTATGGGCAATGGCTACGTTAGGGTTTGAAGATTATATTGATCCTCT
GAAAGTGTATCTACACAGGTTCAGAGAGATAGAGGGTGACGCCAAGGGATCTGTGAAGGGTGGAGATGGATCTACTAAAA
AAGATTGA