
Microexon ID | Vv_6:4348062-4348067:- |
Species | Vistis vinifera | Coordinates | 6:4348062..4348067 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATAGAG |
Microexon Amino Acid seq | IE |
Microexon-tag DNA Seq | TTTGAAGATTATATTGATCCTCTGAAAGTGTATCTACACAGGTTCAGAGAGATAGAGGGTGACGCCAAGGGATCTGTGAAGGGTGGAGATGGATCTACTAAAAAAGAT |
Microexon-tag Amino Acid Seq | FEDYIDPLKVYLHRFREIEGDAKGSVKGGDGSTKKD |
Microexon-tag spanning region | 4347864-4348313 |
Microexon-tag prediction score | 0.9524 |
Overlapped with the annotated transcript (%) | 94.44 |
New Transcript ID | VIT_06s0004g03490.t01x |
Reference Transcript ID | VIT_06s0004g03490.t01 |
Gene ID | VIT_06s0004g03490 |
Gene Name | NA |
Vv_6:4348062-4348067:- does not have available information here.
Microexon DNA seq | ATAGAG |
Microexon Amino Acid seq | IE |
Microexon-tag DNA Seq | TTTGAAGATTATATTGATCCTCTGAAAGTGTATCTACACAGGTTCAGAGAGATAGAGGGTGACGCCAAGGGATCTGTGAAGGGTGGAGATGGATCTACTAAAAAAGAT |
Microexon-tag Amino Acid seq | FEDYIDPLKVYLHRFREIEGDAKGSVKGGDGSTKKD |
Transcript ID | Vv.26670.1 |
Gene ID | Vv.26670 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Vv.26670.1 MAEAPTSPGGGGSHESGEHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETLQECVSEFISFITSEASDKCQK EKRKTINGDDLLWAMATLGFEDYIDPLKVYLHRFREIEGDAKGSVKGGDGSTKKD* |
CDS seq | >Vv.26670.1 ATGGCTGAAGCTCCGACGAGCCCCGGCGGTGGCGGCAGTCACGAGAGCGGCGAGCACAGCCCTCGTTCCAATGTGCGAGA GCAGGATAGGTACCTTCCTATCGCAAATATCAGCAGGATCATGAAGAAGGCTCTTCCGGCCAACGGCAAGATCGCCAAGG ATGCGAAGGAGACTCTCCAAGAATGCGTTTCCGAGTTCATCAGTTTCATCACCAGCGAAGCGAGTGACAAGTGCCAGAAG GAGAAGAGGAAGACAATTAATGGTGATGATTTATTATGGGCAATGGCTACGTTAGGGTTTGAAGATTATATTGATCCTCT GAAAGTGTATCTACACAGGTTCAGAGAGATAGAGGGTGACGCCAAGGGATCTGTGAAGGGTGGAGATGGATCTACTAAAA AAGATTGA |