Microexon ID Vv_13:4754271-4754276:+
Species Vistis vinifera
Coordinates 13:4754271..4754276
Microexon Cluster ID MEP10
Size 6
Phase 0
Pfam Domain Motif DUF4788
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq CTGGAG
Microexon Amino Acid seq LE
Microexon-tag DNA Seq TTTGAAGATTATATTGAACCACTAAAGGTGTACCTGCAGAGATATAGAGAGCTGGAGGGTGATACCAGGGGATCTGCTAGAGGTGGAGATGGATCTGCTAGAAGGGAT
Microexon-tag Amino Acid Seq FEDYIEPLKVYLQRYRELEGDTRGSARGGDGSARRD
Microexon-tag spanning region4753728-4754469
Microexon-tag prediction score0.9615
Overlapped with the annotated transcript (%) 94.44
New Transcript ID VIT_13s0019g03600.t01x
Reference Transcript ID VIT_13s0019g03600.t01
Gene ID VIT_13s0019g03600
Gene Name NA
Vv_13:4754271-4754276:+ does not have available information here.
Microexon DNA seq CTGGAG
Microexon Amino Acid seq LE
Microexon-tag DNA Seq TTTGAAGATTATATTGAACCACTAAAGGTGTACCTGCAGAGATATAGAGAGCTGGAGGGTGATACCAGGGGATCTGCTAGAGGTGGAGATGGATCTGCTAGAAGGGAT
Microexon-tag Amino Acid seq FEDYIEPLKVYLQRYRELEGDTRGSARGGDGSARRD
Transcript ID Vv.6991.2
Gene ID Vv.6991
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Vv.6991.2
MADGPASPPGGSHESGGDQSPRHNVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQK
EKRKTINGDDLLWAMATLGFEDYIEPLKVYLQRYRELEGDTRGSARGGDGSARRDAIGSQPGPNAQFAHQGSFTQAMNYM
NSQAQGQHLIVSPVQSSE*
CDS seq >Vv.6991.2
ATGGCAGATGGTCCGGCGAGTCCCCCCGGAGGCAGCCACGAAAGCGGCGGGGACCAGAGCCCCCGCCACAACGTTCGTGA
GCAGGACCGGTACCTTCCGATCGCCAACATCAGCCGCATCATGAAGAAGGCGTTGCCGGCTAATGGTAAGATCGCCAAGG
ATGCGAAGGACACTGTCCAAGAGTGCGTCTCCGAGTTCATCAGTTTCATCACCAGCGAGGCTAGTGATAAGTGTCAGAAA
GAGAAGCGAAAGACGATTAATGGTGATGATCTGCTTTGGGCGATGGCGACCCTAGGATTTGAAGATTATATTGAACCACT
AAAGGTGTACCTGCAGAGATATAGAGAGCTGGAGGGTGATACCAGGGGATCTGCTAGAGGTGGAGATGGATCTGCTAGAA
GGGATGCAATAGGAAGTCAACCTGGTCCAAATGCACAGTTTGCTCATCAGGGGTCCTTTACGCAAGCAATGAACTATATG
AATTCCCAGGCACAGGGGCAGCATCTAATTGTATCTCCCGTGCAAAGTAGCGAGTAG