
Microexon ID | Vv_13:4754271-4754276:+ |
Species | Vistis vinifera | Coordinates | 13:4754271..4754276 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CTGGAG |
Microexon Amino Acid seq | LE |
Microexon-tag DNA Seq | TTTGAAGATTATATTGAACCACTAAAGGTGTACCTGCAGAGATATAGAGAGCTGGAGGGTGATACCAGGGGATCTGCTAGAGGTGGAGATGGATCTGCTAGAAGGGAT |
Microexon-tag Amino Acid Seq | FEDYIEPLKVYLQRYRELEGDTRGSARGGDGSARRD |
Microexon-tag spanning region | 4753728-4754469 |
Microexon-tag prediction score | 0.9615 |
Overlapped with the annotated transcript (%) | 94.44 |
New Transcript ID | VIT_13s0019g03600.t01x |
Reference Transcript ID | VIT_13s0019g03600.t01 |
Gene ID | VIT_13s0019g03600 |
Gene Name | NA |
Vv_13:4754271-4754276:+ does not have available information here.
Microexon DNA seq | CTGGAG |
Microexon Amino Acid seq | LE |
Microexon-tag DNA Seq | TTTGAAGATTATATTGAACCACTAAAGGTGTACCTGCAGAGATATAGAGAGCTGGAGGGTGATACCAGGGGATCTGCTAGAGGTGGAGATGGATCTGCTAGAAGGGAT |
Microexon-tag Amino Acid seq | FEDYIEPLKVYLQRYRELEGDTRGSARGGDGSARRD |
Transcript ID | Vv.6991.2 |
Gene ID | Vv.6991 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Vv.6991.2 MADGPASPPGGSHESGGDQSPRHNVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQK EKRKTINGDDLLWAMATLGFEDYIEPLKVYLQRYRELEGDTRGSARGGDGSARRDAIGSQPGPNAQFAHQGSFTQAMNYM NSQAQGQHLIVSPVQSSE* |
CDS seq | >Vv.6991.2 ATGGCAGATGGTCCGGCGAGTCCCCCCGGAGGCAGCCACGAAAGCGGCGGGGACCAGAGCCCCCGCCACAACGTTCGTGA GCAGGACCGGTACCTTCCGATCGCCAACATCAGCCGCATCATGAAGAAGGCGTTGCCGGCTAATGGTAAGATCGCCAAGG ATGCGAAGGACACTGTCCAAGAGTGCGTCTCCGAGTTCATCAGTTTCATCACCAGCGAGGCTAGTGATAAGTGTCAGAAA GAGAAGCGAAAGACGATTAATGGTGATGATCTGCTTTGGGCGATGGCGACCCTAGGATTTGAAGATTATATTGAACCACT AAAGGTGTACCTGCAGAGATATAGAGAGCTGGAGGGTGATACCAGGGGATCTGCTAGAGGTGGAGATGGATCTGCTAGAA GGGATGCAATAGGAAGTCAACCTGGTCCAAATGCACAGTTTGCTCATCAGGGGTCCTTTACGCAAGCAATGAACTATATG AATTCCCAGGCACAGGGGCAGCATCTAATTGTATCTCCCGTGCAAAGTAGCGAGTAG |