Microexon ID Ta_1D:385811458-385811463:-
Species Triticum   Aestivum
Coordinates 1D:385811458..385811463
Microexon Cluster ID MEP10
Size 6
Phase 0
Pfam Domain Motif DUF4788
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ACGGAG
Microexon Amino Acid seq TE
Microexon-tag DNA Seq TTTGAGGAGTACATCGAGCCCCTCAAGGTTTATCTGCAGAAGTACAGAGAGACGGAGGGTGATAGTAAGCTAGCTGGGAAGTCTGGCGATGTCTCTGTTAAAAAGGAT
Microexon-tag Amino Acid Seq FEEYIEPLKVYLQKYRETEGDSKLAGKSGDVSVKKD
Microexon-tag spanning region385810732-385812244
Microexon-tag prediction score0.9429
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS1D02G287500.1x
Reference Transcript ID TraesCS1D02G287500.1
Gene ID TraesCS1D02G287500
Gene Name NA
Transcript ID TraesCS1D02G287500.1
Protein ID
Gene ID TraesCS1D02G287500
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >TraesCS1D02G287500.1
MSDAPASPPGGGGGGGGGGSDDGGGGGGFGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSE
ASDKCQREKRKTINGDDLLWAMATLGFEEYIEPLKVYLQKYRETEGDSKLAGKSGDVSVKKDALGPHGGSSGTSAQGMGQ
QVAYNPGMVYMQPQYHNGDISN*
CDS seq >TraesCS1D02G287500.1
ATGTCGGACGCGCCGGCGAGCCCGCCGGGCGGCGGGGGCGGAGGAGGAGGCGGCGGCAGCGACGACGGCGGCGGCGGCGG
CGGCTTCGGCGGCGTCAGGGAGCAGGACAGGTTCCTGCCCATCGCCAACATCAGCCGCATCATGAAGAAGGCCATCCCGG
CCAACGGCAAGATCGCCAAGGACGCCAAGGAGACCGTGCAGGAGTGCGTCTCCGAGTTCATCTCCTTCATCACCAGCGAG
GCGAGCGACAAGTGCCAGAGGGAGAAGCGCAAGACCATCAACGGCGACGACCTGCTCTGGGCGATGGCGACGCTGGGCTT
TGAGGAGTACATCGAGCCCCTCAAGGTTTATCTGCAGAAGTACAGAGAGACGGAGGGTGATAGTAAGCTAGCTGGGAAGT
CTGGCGATGTCTCTGTTAAAAAGGATGCACTGGGTCCTCATGGAGGATCAAGTGGCACAAGTGCGCAAGGGATGGGCCAA
CAAGTAGCATACAATCCAGGAATGGTTTATATGCAACCTCAGTACCATAATGGGGACATCTCAAACTGA
Ta_1D:385811458-385811463:- does not have available information here.