
Microexon ID | Ta_1B:518184978-518184983:- |
Species | Triticum Aestivum | Coordinates | 1B:518184978..518184983 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACGGAG |
Microexon Amino Acid seq | TE |
Microexon-tag DNA Seq | TTCGAGGAGTACATCGAGCCCCTCAAGGTTTATCTGCAGAAGTACAGAGAGACGGAGGGTGATAGTAAGCTAGCTGGAAAGTCTGGTGAAGTCTCTGTTAAAAAGGAT |
Microexon-tag Amino Acid Seq | FEEYIEPLKVYLQKYRETEGDSKLAGKSGEVSVKKD |
Microexon-tag spanning region | 518184251-518185756 |
Microexon-tag prediction score | 0.9434 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS1B02G297900.2x |
Reference Transcript ID | TraesCS1B02G297900.2 |
Gene ID | TraesCS1B02G297900 |
Gene Name | NF-YB1 |
Transcript ID | TraesCS1B02G297900.2 |
Protein ID | |
Gene ID | TraesCS1B02G297900 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >TraesCS1B02G297900.2 MSDAPASPPGGGGGGGGGGSDDGGGGGGFGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSE ASDKCQREKRKTINGDDLLWAMATLGFEEYIEPLKVYLQKYRETEGDSKLAGKSGEVSVKKDALGPHGGASGTSAQGMGQ QVAYNPGMVYMQPQYHNGDISN* |
CDS seq | >TraesCS1B02G297900.2 ATGTCGGACGCGCCGGCGAGCCCCCCGGGCGGCGGCGGCGGCGGAGGAGGCGGCGGCAGCGACGACGGCGGCGGCGGCGG CGGCTTCGGCGGCGTCAGGGAGCAGGACAGGTTCCTGCCCATCGCCAACATCAGCCGCATCATGAAGAAGGCCATCCCGG CCAACGGCAAGATCGCCAAGGACGCCAAGGAGACCGTGCAGGAGTGCGTCTCCGAGTTCATCTCCTTCATCACCAGCGAG GCGAGCGACAAGTGCCAGAGGGAGAAGCGCAAGACCATCAACGGCGACGACCTGCTCTGGGCGATGGCGACGCTGGGCTT CGAGGAGTACATCGAGCCCCTCAAGGTTTATCTGCAGAAGTACAGAGAGACGGAGGGTGATAGTAAGCTAGCTGGAAAGT CTGGTGAAGTCTCTGTTAAAAAGGATGCACTTGGTCCTCATGGAGGAGCAAGTGGCACAAGTGCGCAAGGGATGGGCCAA CAAGTAGCATACAATCCAGGAATGGTTTATATGCAACCTCAGTACCATAATGGGGACATCTCAAACTGA |
Ta_1B:518184978-518184983:- does not have available information here.