Microexon ID Ta_1B:518184978-518184983:-
Species Triticum   Aestivum
Coordinates 1B:518184978..518184983
Microexon Cluster ID MEP10
Size 6
Phase 0
Pfam Domain Motif DUF4788
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ACGGAG
Microexon Amino Acid seq TE
Microexon-tag DNA Seq TTCGAGGAGTACATCGAGCCCCTCAAGGTTTATCTGCAGAAGTACAGAGAGACGGAGGGTGATAGTAAGCTAGCTGGAAAGTCTGGTGAAGTCTCTGTTAAAAAGGAT
Microexon-tag Amino Acid Seq FEEYIEPLKVYLQKYRETEGDSKLAGKSGEVSVKKD
Microexon-tag spanning region518184251-518185756
Microexon-tag prediction score0.9434
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS1B02G297900.2x
Reference Transcript ID TraesCS1B02G297900.2
Gene ID TraesCS1B02G297900
Gene Name NF-YB1
Transcript ID TraesCS1B02G297900.2
Protein ID
Gene ID TraesCS1B02G297900
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >TraesCS1B02G297900.2
MSDAPASPPGGGGGGGGGGSDDGGGGGGFGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSE
ASDKCQREKRKTINGDDLLWAMATLGFEEYIEPLKVYLQKYRETEGDSKLAGKSGEVSVKKDALGPHGGASGTSAQGMGQ
QVAYNPGMVYMQPQYHNGDISN*
CDS seq >TraesCS1B02G297900.2
ATGTCGGACGCGCCGGCGAGCCCCCCGGGCGGCGGCGGCGGCGGAGGAGGCGGCGGCAGCGACGACGGCGGCGGCGGCGG
CGGCTTCGGCGGCGTCAGGGAGCAGGACAGGTTCCTGCCCATCGCCAACATCAGCCGCATCATGAAGAAGGCCATCCCGG
CCAACGGCAAGATCGCCAAGGACGCCAAGGAGACCGTGCAGGAGTGCGTCTCCGAGTTCATCTCCTTCATCACCAGCGAG
GCGAGCGACAAGTGCCAGAGGGAGAAGCGCAAGACCATCAACGGCGACGACCTGCTCTGGGCGATGGCGACGCTGGGCTT
CGAGGAGTACATCGAGCCCCTCAAGGTTTATCTGCAGAAGTACAGAGAGACGGAGGGTGATAGTAAGCTAGCTGGAAAGT
CTGGTGAAGTCTCTGTTAAAAAGGATGCACTTGGTCCTCATGGAGGAGCAAGTGGCACAAGTGCGCAAGGGATGGGCCAA
CAAGTAGCATACAATCCAGGAATGGTTTATATGCAACCTCAGTACCATAATGGGGACATCTCAAACTGA
Ta_1B:518184978-518184983:- does not have available information here.