
Microexon ID | Ta_1A:485361833-485361838:- |
Species | Triticum Aestivum | Coordinates | 1A:485361833..485361838 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACGGAG |
Microexon Amino Acid seq | TE |
Microexon-tag DNA Seq | TTCGAGGAGTACATCGAGCCCCTCAAGGTTTATCTGCAGAAGTACAGAGAGACGGAGGGTGATAGTAAGCTAGCTGGGAAGTCTGGTGATGTCTCTGTTAAAAAGGAT |
Microexon-tag Amino Acid Seq | FEEYIEPLKVYLQKYRETEGDSKLAGKSGDVSVKKD |
Microexon-tag spanning region | 485361073-485362645 |
Microexon-tag prediction score | 0.9428 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS1A02G288500.2x |
Reference Transcript ID | TraesCS1A02G288500.2 |
Gene ID | TraesCS1A02G288500 |
Gene Name | NFYB-D2 |
Transcript ID | TraesCS1A02G288500.2 |
Protein ID | |
Gene ID | TraesCS1A02G288500 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >TraesCS1A02G288500.2 MSDEAASPPGGGGGGGGGGSDDGGGGGGFGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSE ASDKCQREKRKTINGDDLLWAMATLGFEEYIEPLKVYLQKYRETEGDSKLAGKSGDVSVKKDALGPHGGASGTSAQGYHN GDISN* |
CDS seq | >TraesCS1A02G288500.2 ATGTCGGACGAGGCGGCGAGCCCCCCGGGCGGCGGCGGCGGCGGAGGAGGCGGCGGCAGCGACGACGGCGGCGGCGGCGG CGGCTTCGGCGGCGTCAGGGAGCAGGACAGGTTCCTGCCCATCGCCAACATCAGCCGCATCATGAAGAAGGCCATCCCGG CCAACGGCAAGATCGCCAAGGACGCCAAGGAGACCGTGCAGGAGTGCGTCTCCGAGTTCATCTCCTTCATCACCAGCGAG GCGAGCGACAAGTGCCAGAGGGAGAAGCGCAAGACCATCAACGGCGACGACCTGCTCTGGGCGATGGCCACGCTGGGCTT CGAGGAGTACATCGAGCCCCTCAAGGTTTATCTGCAGAAGTACAGAGAGACGGAGGGTGATAGTAAGCTAGCTGGGAAGT CTGGTGATGTCTCTGTTAAAAAGGATGCACTGGGTCCTCATGGAGGAGCAAGTGGCACAAGTGCGCAAGGGTACCATAAT GGGGACATCTCAAACTGA |
Ta_1A:485361833-485361838:- does not have available information here.