Microexon ID Ta_1A:485361833-485361838:-
Species Triticum   Aestivum
Coordinates 1A:485361833..485361838
Microexon Cluster ID MEP10
Size 6
Phase 0
Pfam Domain Motif DUF4788
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ACGGAG
Microexon Amino Acid seq TE
Microexon-tag DNA Seq TTCGAGGAGTACATCGAGCCCCTCAAGGTTTATCTGCAGAAGTACAGAGAGACGGAGGGTGATAGTAAGCTAGCTGGGAAGTCTGGTGATGTCTCTGTTAAAAAGGAT
Microexon-tag Amino Acid Seq FEEYIEPLKVYLQKYRETEGDSKLAGKSGDVSVKKD
Microexon-tag spanning region485361073-485362645
Microexon-tag prediction score0.9428
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS1A02G288500.2x
Reference Transcript ID TraesCS1A02G288500.2
Gene ID TraesCS1A02G288500
Gene Name NFYB-D2
Transcript ID TraesCS1A02G288500.2
Protein ID
Gene ID TraesCS1A02G288500
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >TraesCS1A02G288500.2
MSDEAASPPGGGGGGGGGGSDDGGGGGGFGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSE
ASDKCQREKRKTINGDDLLWAMATLGFEEYIEPLKVYLQKYRETEGDSKLAGKSGDVSVKKDALGPHGGASGTSAQGYHN
GDISN*
CDS seq >TraesCS1A02G288500.2
ATGTCGGACGAGGCGGCGAGCCCCCCGGGCGGCGGCGGCGGCGGAGGAGGCGGCGGCAGCGACGACGGCGGCGGCGGCGG
CGGCTTCGGCGGCGTCAGGGAGCAGGACAGGTTCCTGCCCATCGCCAACATCAGCCGCATCATGAAGAAGGCCATCCCGG
CCAACGGCAAGATCGCCAAGGACGCCAAGGAGACCGTGCAGGAGTGCGTCTCCGAGTTCATCTCCTTCATCACCAGCGAG
GCGAGCGACAAGTGCCAGAGGGAGAAGCGCAAGACCATCAACGGCGACGACCTGCTCTGGGCGATGGCCACGCTGGGCTT
CGAGGAGTACATCGAGCCCCTCAAGGTTTATCTGCAGAAGTACAGAGAGACGGAGGGTGATAGTAAGCTAGCTGGGAAGT
CTGGTGATGTCTCTGTTAAAAAGGATGCACTGGGTCCTCATGGAGGAGCAAGTGGCACAAGTGCGCAAGGGTACCATAAT
GGGGACATCTCAAACTGA
Ta_1A:485361833-485361838:- does not have available information here.